Strain Fitness in Rahnella sp. WP5 around EX31_RS15010

Experiment: L-Glutamine (N); RCH2 media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; no shaking
14,350	+		EX31_RS15005	0.51	-1.3
14,350	+		EX31_RS15005	0.51	-1.8
14,351	-		EX31_RS15005	0.51	-4.4
14,351	-		EX31_RS15005	0.51	-4.1
14,351	-		EX31_RS15005	0.51	-3.6
14,351	-		EX31_RS15005	0.51	-2.8
14,351	-		EX31_RS15005	0.51	-2.3
14,375	+		EX31_RS15005	0.52	-3.7
14,375	+		EX31_RS15005	0.52	-2.2
14,375	+		EX31_RS15005	0.52	-2.0
14,375	+		EX31_RS15005	0.52	-4.6
14,376	-		EX31_RS15005	0.52	-2.6
14,376	-		EX31_RS15005	0.52	-2.1
14,504	+		EX31_RS15005	0.59	-4.1
14,504	+		EX31_RS15005	0.59	-3.4
14,505	-		EX31_RS15005	0.59	-3.1
14,609	-		EX31_RS15005	0.65	-2.4
14,638	+		EX31_RS15005	0.66	-1.7
14,691	-		EX31_RS15005	0.69	-2.9
14,716	+		EX31_RS15005	0.70	-4.1
14,717	-		EX31_RS15005	0.70	-4.7
14,740	+		EX31_RS15005	0.72	-3.8
14,740	+		EX31_RS15005	0.72	-0.5
14,777	+		EX31_RS15005	0.74	-3.1
14,777	+		EX31_RS15005	0.74	-2.5
14,777	+		EX31_RS15005	0.74	-3.6
14,778	-		EX31_RS15005	0.74	-4.2
14,778	-		EX31_RS15005	0.74	-3.5
14,778	-		EX31_RS15005	0.74	-2.8
14,852	+		EX31_RS15005	0.78	-3.1
14,895	-		EX31_RS15005	0.80	-4.3
14,906	+		EX31_RS15005	0.81	-3.8
14,906	+		EX31_RS15005	0.81	-2.9
14,906	+		EX31_RS15005	0.81	-2.6
14,906	+		EX31_RS15005	0.81	-0.8
14,907	-		EX31_RS15005	0.81	-3.9
14,907	-		EX31_RS15005	0.81	+0.0
14,907	-		EX31_RS15005	0.81	-2.9
14,907	-		EX31_RS15005	0.81	-4.0
14,907	-		EX31_RS15005	0.81	-3.7
14,907	-		EX31_RS15005	0.81	+0.3
15,076	+		EX31_RS15005	0.90	-1.8
15,076	+		EX31_RS15005	0.90	-2.5
15,076	+		EX31_RS15005	0.90	-3.3
15,077	-		EX31_RS15005	0.90	-2.4
15,077	-		EX31_RS15005	0.90	-3.8
15,077	-		EX31_RS15005	0.90	-2.9
15,200	+				-1.6
15,200	+				-2.6
15,201	-				-3.7
15,250	+				-4.1
15,250	+				-2.6
15,251	-				-3.9
15,316	+				-2.6
15,317	-				-3.8
15,317	-				-2.1
15,346	+				-1.8
15,346	+				-4.3
15,346	+				-3.1
15,347	-				-2.0
15,364	-				-3.3
15,453	+		EX31_RS15010	0.12	-3.6
15,469	+		EX31_RS15010	0.13	-3.0
15,636	+		EX31_RS15010	0.24	-2.8
15,637	-		EX31_RS15010	0.24	-3.9
15,818	+		EX31_RS15010	0.35	-4.3
15,818	+		EX31_RS15010	0.35	-4.0
15,819	-		EX31_RS15010	0.35	-3.9
16,009	-		EX31_RS15010	0.48	-2.4
16,165	+		EX31_RS15010	0.58	-2.4
16,165	+		EX31_RS15010	0.58	-2.5
16,165	+		EX31_RS15010	0.58	-3.0
16,165	+		EX31_RS15010	0.58	-3.9
16,166	-		EX31_RS15010	0.58	-3.6
16,166	-		EX31_RS15010	0.58	-3.9
16,166	-		EX31_RS15010	0.58	-2.8
16,166	-		EX31_RS15010	0.58	-2.9
16,182	+		EX31_RS15010	0.59	-3.1
16,182	+		EX31_RS15010	0.59	-2.8
16,182	+		EX31_RS15010	0.59	-3.4
16,182	+		EX31_RS15010	0.59	-2.3
16,246	+		EX31_RS15010	0.63	-2.9
16,246	+		EX31_RS15010	0.63	-3.6
16,246	+		EX31_RS15010	0.63	-4.8
16,246	+		EX31_RS15010	0.63	-3.6
16,246	+		EX31_RS15010	0.63	-4.9
16,246	+		EX31_RS15010	0.63	-4.4
16,247	-		EX31_RS15010	0.63	-3.4
16,247	-		EX31_RS15010	0.63	-0.3
16,375	+		EX31_RS15010	0.71	-1.5
16,375	+		EX31_RS15010	0.71	-0.7
16,375	+		EX31_RS15010	0.71	-2.3
16,375	+		EX31_RS15010	0.71	-1.9
16,375	+		EX31_RS15010	0.71	-1.1
16,376	-		EX31_RS15010	0.72	-1.6
16,376	-		EX31_RS15010	0.72	-2.3
16,376	-		EX31_RS15010	0.72	-1.5
16,376	-		EX31_RS15010	0.72	-3.6
16,376	-		EX31_RS15010	0.72	-2.6
16,381	+		EX31_RS15010	0.72	-1.0
16,531	+		EX31_RS15010	0.82	-2.6
16,531	+		EX31_RS15010	0.82	-1.4
16,531	+		EX31_RS15010	0.82	-1.2
16,531	+		EX31_RS15010	0.82	-1.9
16,531	+		EX31_RS15010	0.82	+0.2
16,531	+		EX31_RS15010	0.82	-0.5
16,531	+		EX31_RS15010	0.82	-0.5
16,531	+		EX31_RS15010	0.82	-1.9
16,531	+		EX31_RS15010	0.82	-0.5
16,531	+		EX31_RS15010	0.82	-0.9
16,531	+		EX31_RS15010	0.82	-0.5
16,531	+		EX31_RS15010	0.82	-1.0
16,532	-		EX31_RS15010	0.82	-3.5
16,532	-		EX31_RS15010	0.82	-0.9
16,532	-		EX31_RS15010	0.82	-0.9
16,532	-		EX31_RS15010	0.82	-0.8
16,532	-		EX31_RS15010	0.82	-2.5
16,532	-		EX31_RS15010	0.82	-0.3
16,532	-		EX31_RS15010	0.82	-0.6
16,532	-		EX31_RS15010	0.82	-2.3
16,532	-		EX31_RS15010	0.82	-1.1
16,532	-		EX31_RS15010	0.82	-1.2
16,532	-		EX31_RS15010	0.82	-2.2
16,576	+		EX31_RS15010	0.84	-2.0
16,576	+		EX31_RS15010	0.84	-1.3
16,626	+		EX31_RS15010	0.88	-4.9
16,626	+		EX31_RS15010	0.88	-2.5
16,626	+		EX31_RS15010	0.88	-3.8
16,626	+		EX31_RS15010	0.88	-4.1
16,627	-		EX31_RS15010	0.88	-2.6
16,627	-		EX31_RS15010	0.88	-0.3
16,648	-		EX31_RS15010	0.89	-3.0
16,759	+				-1.6
16,858	-				-0.8
16,858	-				-0.4
16,960	-		EX31_RS15015	0.11	-3.2
16,960	-		EX31_RS15015	0.11	-4.0
16,974	+		EX31_RS15015	0.12	-0.9
16,974	+		EX31_RS15015	0.12	-0.2
16,975	-		EX31_RS15015	0.13	-3.1
17,056	+		EX31_RS15015	0.22	-0.8
17,056	+		EX31_RS15015	0.22	-0.1
17,056	+		EX31_RS15015	0.22	-0.8
17,056	+		EX31_RS15015	0.22	-0.7
17,056	+		EX31_RS15015	0.22	-0.2
17,056	+		EX31_RS15015	0.22	+0.2
17,056	+		EX31_RS15015	0.22	-0.8
17,057	-		EX31_RS15015	0.22	-3.3
17,057	-		EX31_RS15015	0.22	-3.0
17,057	-		EX31_RS15015	0.22	-2.0
17,057	-		EX31_RS15015	0.22	-0.8
17,057	-		EX31_RS15015	0.22	-1.5
17,087	+		EX31_RS15015	0.25	-0.6
17,088	-		EX31_RS15015	0.25	-3.4
17,438	+		EX31_RS15015	0.65	+0.6
17,439	-		EX31_RS15015	0.65	-2.6
17,606	-		EX31_RS15015	0.84	-1.4
17,716	+				-0.2
17,716	+				+0.5
17,716	+				-0.4
17,717	-				-4.6
17,737	+				+0.7
17,737	+				-0.5
17,737	+				-0.4
17,737	+				-0.3
17,737	+				-0.1
17,737	+				-0.3
17,738	-				-2.6
17,738	-				-4.8
17,738	-				-3.9
17,738	-				-3.2
17,738	-				-1.3
17,738	-				-2.0
17,738	-				-3.3
17,738	-				-2.4
17,752	+				+0.1
17,791	-				-0.7