Strain Fitness in Rahnella sp. WP5 around EX31_RS14200

Experiment: L-Glutamine (N); RCH2 media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; no shaking
15,993	+		EX31_RS14195	0.40	-1.8
15,993	+		EX31_RS14195	0.40	-1.9
15,993	+		EX31_RS14195	0.40	-1.3
15,994	-		EX31_RS14195	0.40	-1.0
15,994	-		EX31_RS14195	0.40	-1.7
15,994	-		EX31_RS14195	0.40	-0.8
15,994	-		EX31_RS14195	0.40	-0.3
15,994	-		EX31_RS14195	0.40	-0.5
15,994	-		EX31_RS14195	0.40	-1.0
16,152	-		EX31_RS14195	0.53	-0.5
16,152	-		EX31_RS14195	0.53	+0.4
16,183	+		EX31_RS14195	0.56	-1.3
16,184	-		EX31_RS14195	0.56	-1.1
16,184	-		EX31_RS14195	0.56	+0.3
16,184	-		EX31_RS14195	0.56	-0.5
16,184	-		EX31_RS14195	0.56	-0.6
16,199	+		EX31_RS14195	0.57	-0.2
16,215	+		EX31_RS14195	0.59	-0.5
16,215	+		EX31_RS14195	0.59	-0.8
16,263	+		EX31_RS14195	0.63	-0.5
16,263	+		EX31_RS14195	0.63	-1.4
16,263	+		EX31_RS14195	0.63	-1.7
16,264	-		EX31_RS14195	0.63	+0.1
16,264	-		EX31_RS14195	0.63	-0.7
16,264	-		EX31_RS14195	0.63	-0.7
16,264	-		EX31_RS14195	0.63	+0.1
16,265	+		EX31_RS14195	0.63	+0.3
16,265	+		EX31_RS14195	0.63	-0.9
16,265	+		EX31_RS14195	0.63	-2.6
16,265	+		EX31_RS14195	0.63	-0.5
16,265	+		EX31_RS14195	0.63	-1.8
16,266	-		EX31_RS14195	0.63	-2.3
16,266	-		EX31_RS14195	0.63	+0.4
16,266	-		EX31_RS14195	0.63	-1.4
16,266	-		EX31_RS14195	0.63	+1.5
16,266	-		EX31_RS14195	0.63	-1.5
16,266	-		EX31_RS14195	0.63	-2.9
16,266	-		EX31_RS14195	0.63	-0.6
16,266	-		EX31_RS14195	0.63	-0.1
16,266	-		EX31_RS14195	0.63	-1.0
16,292	+		EX31_RS14195	0.66	-0.7
16,292	+		EX31_RS14195	0.66	-1.6
16,292	+		EX31_RS14195	0.66	-1.9
16,293	-		EX31_RS14195	0.66	-1.8
16,293	-		EX31_RS14195	0.66	-1.5
16,293	-		EX31_RS14195	0.66	-1.0
16,412	+		EX31_RS14195	0.76	-1.3
16,412	+		EX31_RS14195	0.76	-0.9
16,412	+		EX31_RS14195	0.76	-1.3
16,412	+		EX31_RS14195	0.76	-1.3
16,413	-		EX31_RS14195	0.76	-1.7
16,413	-		EX31_RS14195	0.76	-1.0
16,413	-		EX31_RS14195	0.76	-0.3
16,413	-		EX31_RS14195	0.76	-0.5
16,413	-		EX31_RS14195	0.76	-1.0
16,413	-		EX31_RS14195	0.76	+0.4
16,450	-		EX31_RS14195	0.79	-0.8
16,495	+		EX31_RS14195	0.83	-1.3
16,524	+		EX31_RS14195	0.86	-1.0
16,524	+		EX31_RS14195	0.86	-0.4
16,524	+		EX31_RS14195	0.86	+0.7
16,524	+		EX31_RS14195	0.86	-0.6
16,524	+		EX31_RS14195	0.86	-0.3
16,524	+		EX31_RS14195	0.86	-1.2
16,524	+		EX31_RS14195	0.86	-0.8
16,524	+		EX31_RS14195	0.86	-0.7
16,525	-		EX31_RS14195	0.86	-0.5
16,525	-		EX31_RS14195	0.86	-1.4
16,525	-		EX31_RS14195	0.86	-1.1
16,525	-		EX31_RS14195	0.86	-2.3
16,545	-		EX31_RS14195	0.88	-1.3
16,586	+				-0.8
16,587	-				-2.3
16,587	-				-1.1
16,614	+				-1.4
16,614	+				-0.9
16,614	+				-2.4
16,614	+				-1.3
16,614	+				-1.0
16,614	+				+0.1
16,614	+				+0.2
16,614	+				-0.2
16,614	+				-0.7
16,614	+				-0.1
16,615	-				-1.3
16,615	-				-1.4
16,615	-				+0.3
16,615	-				-0.3
16,615	-				-1.8
16,615	-				-0.6
16,615	-				-0.2
16,615	-				-0.3
16,615	-				-1.0
16,615	-				-1.0
16,615	-				-0.3
16,615	-				-0.3
16,615	-				-0.2
16,616	+				-1.2
16,616	+				-1.3
16,616	+				-1.5
16,616	+				-0.2
16,616	+				-3.8
16,616	+				+0.5
16,616	+				-0.7
16,616	+				-2.1
16,616	+				-0.2
16,617	-				-1.1
16,617	-				-0.9
16,617	-				-1.6
16,617	-				+1.2
16,617	-				+0.7
16,617	-				-1.7
16,617	-				-1.8
16,622	+				-1.2
16,623	-				-1.5
16,634	+				-1.6
16,635	-				-0.5
16,690	-				+0.2
16,745	-				+0.5
16,745	-				-0.4
16,745	-				-0.6
16,745	-				-0.3
16,749	+				+0.3
16,749	+				+0.8
16,749	+				-0.6
16,750	-				+0.1
16,750	-				-0.6
16,794	-				+0.1
16,856	-				-1.4
16,880	+				-0.6
16,880	+				-0.6
16,880	+				-0.0
16,880	+				-0.2
16,880	+				-0.5
16,881	-				-1.2
16,881	-				-1.8
16,936	+				-0.1
16,936	+				-0.6
16,943	+				-0.4
16,943	+				-0.7
16,944	-				-2.1
16,946	-				-0.7
16,975	+				-0.0
16,975	+				-0.5
16,975	+				-1.0
16,975	+				-1.0
16,976	-				-2.8
16,976	-				-1.9
16,976	-				-2.3
16,978	+				-0.8
16,978	+				-0.4
16,978	+				-2.3
16,978	+				-0.8
16,978	+				-3.4
16,978	+				+0.5
16,979	-				-2.1
16,979	-				-1.4
16,979	-				-2.2
16,979	-				-0.9
16,979	-				-1.4
16,979	-				-2.3
16,991	+				-1.6
16,991	+				-2.4
16,992	-				-2.3
16,992	-				-3.2
17,008	+				-2.4
17,008	+				-1.6
17,008	+				-4.1
17,008	+				-2.4
17,008	+				-1.7
17,008	+				-2.9
17,008	+				-2.4
17,009	-				-0.3
17,009	-				-2.0
17,009	-				-1.3
17,009	-				-0.1
17,009	-				+0.6
17,009	-				-0.2
17,017	+				-1.0
17,018	-				-2.1
17,018	-				-1.7
17,018	-				-2.1
17,022	+				-2.2
17,023	-				-1.7
17,023	-				-0.1
17,026	+				-1.7
17,026	+				-1.8
17,053	+				-2.9
17,053	+				-2.1
17,053	+				-1.5
17,053	+				-1.1
17,053	+				-2.8
17,053	+				-1.0
17,053	+				-3.6
17,054	-				-0.2
17,054	-				-1.4
17,054	-				-2.2
17,069	-				-2.1
17,145	+				-2.3
17,145	+				-3.7
17,146	-				-0.9
17,146	-				-1.7
17,220	+				-0.7
17,240	+				-2.0
17,241	-				-1.4
17,340	+		EX31_RS14200	0.14	-2.1
17,341	-		EX31_RS14200	0.14	-2.4
17,410	+		EX31_RS14200	0.16	-4.0
17,410	+		EX31_RS14200	0.16	-2.0
17,440	+		EX31_RS14200	0.17	-3.1
17,440	+		EX31_RS14200	0.17	-2.5
17,441	-		EX31_RS14200	0.17	-2.0
17,481	-		EX31_RS14200	0.19	-2.8
17,517	+		EX31_RS14200	0.20	-1.5
17,517	+		EX31_RS14200	0.20	-2.4
17,536	+		EX31_RS14200	0.21	-2.5
17,537	-		EX31_RS14200	0.21	-1.7
17,751	+		EX31_RS14200	0.29	-2.4
17,951	-		EX31_RS14200	0.37	-0.7
17,960	+		EX31_RS14200	0.37	-1.2
17,960	+		EX31_RS14200	0.37	-1.8
17,960	+		EX31_RS14200	0.37	-1.1
17,960	+		EX31_RS14200	0.37	-2.3
18,053	+		EX31_RS14200	0.41	-3.0
18,053	+		EX31_RS14200	0.41	-3.2
18,054	-		EX31_RS14200	0.41	-2.5
18,054	-		EX31_RS14200	0.41	-1.4
18,085	+		EX31_RS14200	0.42	-1.6
18,085	+		EX31_RS14200	0.42	-1.2
18,109	+		EX31_RS14200	0.43	-2.7
18,110	-		EX31_RS14200	0.43	-2.7
18,110	-		EX31_RS14200	0.43	-2.7
18,343	+		EX31_RS14200	0.52	-3.0
18,343	+		EX31_RS14200	0.52	-2.1
18,344	-		EX31_RS14200	0.52	+0.4
18,389	+		EX31_RS14200	0.53	-1.4
18,389	+		EX31_RS14200	0.53	-2.4
18,389	+		EX31_RS14200	0.53	-3.6
18,389	+		EX31_RS14200	0.53	-1.7
18,389	+		EX31_RS14200	0.53	-2.6
18,389	+		EX31_RS14200	0.53	-0.8
18,389	+		EX31_RS14200	0.53	-2.0
18,389	+		EX31_RS14200	0.53	-1.3
18,389	+		EX31_RS14200	0.53	-1.3
18,389	+		EX31_RS14200	0.53	-2.4
18,390	-		EX31_RS14200	0.53	-1.7
18,390	-		EX31_RS14200	0.53	-3.7
18,390	-		EX31_RS14200	0.53	-1.9
18,390	-		EX31_RS14200	0.53	-3.4
18,390	-		EX31_RS14200	0.53	-2.2
18,390	-		EX31_RS14200	0.53	-3.8
18,390	-		EX31_RS14200	0.53	-2.3
18,390	-		EX31_RS14200	0.53	-2.0
18,390	-		EX31_RS14200	0.53	-3.1
18,390	-		EX31_RS14200	0.53	-1.3
18,433	-		EX31_RS14200	0.55	-3.5
18,433	-		EX31_RS14200	0.55	-0.5
18,647	+		EX31_RS14200	0.63	-1.7
18,648	-		EX31_RS14200	0.63	-2.9
18,806	-		EX31_RS14200	0.69	-0.1
18,875	+		EX31_RS14200	0.72	-3.4
18,875	+		EX31_RS14200	0.72	-0.7
18,876	-		EX31_RS14200	0.72	-1.5
18,876	-		EX31_RS14200	0.72	-1.2
18,876	-		EX31_RS14200	0.72	-3.1
18,876	-		EX31_RS14200	0.72	-1.0
18,986	+		EX31_RS14200	0.76	-3.8
18,986	+		EX31_RS14200	0.76	-0.7
19,016	+		EX31_RS14200	0.77	-1.9
19,016	+		EX31_RS14200	0.77	-3.7
19,016	+		EX31_RS14200	0.77	-3.5
19,017	-		EX31_RS14200	0.77	+0.3
19,085	-		EX31_RS14200	0.80	-2.1
19,270	+		EX31_RS14200	0.87	-2.8
19,316	+		EX31_RS14200	0.88	-1.1
19,317	-		EX31_RS14200	0.88	-3.1
19,319	+		EX31_RS14200	0.88	-0.1
19,319	+		EX31_RS14200	0.88	-1.0
19,319	+		EX31_RS14200	0.88	-0.1
19,320	-		EX31_RS14200	0.88	-1.8
19,320	-		EX31_RS14200	0.88	+0.3
19,320	-		EX31_RS14200	0.88	-1.8
19,414	+				-3.1
19,415	-				-0.3
19,478	+				-1.4
19,478	+				-2.2
19,479	-				-2.3
19,479	-				-0.7
19,612	+				-1.3
19,613	-				-2.5
19,613	-				-2.1
19,613	-				-2.9
19,615	+				-1.0
19,615	+				-2.4
19,616	-				-2.2
19,675	+				-1.3
19,698	+				+2.2
19,960	+		EX31_RS14205	0.29	-3.6
20,034	+		EX31_RS14205	0.37	-4.1
20,093	-		EX31_RS14205	0.44	-5.2
20,105	-		EX31_RS14205	0.45	-3.3
20,105	-		EX31_RS14205	0.45	-3.6
20,167	+		EX31_RS14205	0.52	-5.4
20,167	+		EX31_RS14205	0.52	-2.1
20,168	-		EX31_RS14205	0.52	-3.8
20,168	-		EX31_RS14205	0.52	-3.1
20,214	+		EX31_RS14205	0.57	-3.0
20,214	+		EX31_RS14205	0.57	-2.9
20,214	+		EX31_RS14205	0.57	-1.6
20,214	+		EX31_RS14205	0.57	-4.3
20,214	+		EX31_RS14205	0.57	-1.0
20,215	-		EX31_RS14205	0.57	-3.3
20,215	-		EX31_RS14205	0.57	-2.6
20,290	-		EX31_RS14205	0.65	-3.7
20,332	+		EX31_RS14205	0.70	-4.3
20,333	-		EX31_RS14205	0.70	-4.9
20,333	-		EX31_RS14205	0.70	-2.8
20,374	+		EX31_RS14205	0.74	-4.1
20,399	-		EX31_RS14205	0.77	-3.0
20,446	+		EX31_RS14205	0.82	-1.5
20,447	-		EX31_RS14205	0.83	-3.7
20,473	+		EX31_RS14205	0.85	-2.9
20,473	+		EX31_RS14205	0.85	-4.0
20,474	-		EX31_RS14205	0.85	-2.8
20,474	-		EX31_RS14205	0.85	-3.2
20,474	-		EX31_RS14205	0.85	-3.6
20,474	-		EX31_RS14205	0.85	-2.8
20,474	-		EX31_RS14205	0.85	-2.2
20,474	-		EX31_RS14205	0.85	-3.9
20,488	+		EX31_RS14205	0.87	-2.9
20,488	+		EX31_RS14205	0.87	-2.6
20,488	+		EX31_RS14205	0.87	-3.7
20,488	+		EX31_RS14205	0.87	-0.7
20,488	+		EX31_RS14205	0.87	-2.1
20,488	+		EX31_RS14205	0.87	-3.2
20,488	+		EX31_RS14205	0.87	-1.0
20,488	+		EX31_RS14205	0.87	-1.9
20,489	-		EX31_RS14205	0.87	-4.0
20,489	-		EX31_RS14205	0.87	-3.1
20,489	-		EX31_RS14205	0.87	-3.1
20,489	-		EX31_RS14205	0.87	-4.1
20,489	-		EX31_RS14205	0.87	-2.5
20,489	-		EX31_RS14205	0.87	-3.7
20,489	-		EX31_RS14205	0.87	-2.6
20,506	+		EX31_RS14205	0.89	-1.7
20,507	-		EX31_RS14205	0.89	-3.4
20,549	+				-4.3
20,549	+				-3.0
20,549	+				-3.0
20,550	-				-2.4
20,605	+				-3.6
20,605	+				-4.9
20,606	-				-3.9
20,612	+				-4.1
20,612	+				-3.6