Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16210

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
4,067,161	+				+0.2
4,067,162	-				+0.2
4,067,184	+				-0.1
4,067,185	-				-0.2
4,067,216	-		CA265_RS16200	0.13	-0.4
4,067,291	+		CA265_RS16200	0.31	-0.3
4,067,371	+		CA265_RS16200	0.50	-0.8
4,067,372	-		CA265_RS16200	0.50	-0.0
4,067,376	+		CA265_RS16200	0.51	-1.0
4,067,393	-		CA265_RS16200	0.55	+0.2
4,067,422	+		CA265_RS16200	0.62	-0.5
4,067,422	+		CA265_RS16200	0.62	-0.3
4,067,423	-		CA265_RS16200	0.63	-0.3
4,067,423	-		CA265_RS16200	0.63	+0.3
4,067,424	+		CA265_RS16200	0.63	-0.5
4,067,425	-		CA265_RS16200	0.63	+0.6
4,067,425	-		CA265_RS16200	0.63	-0.6
4,067,559	-				-0.0
4,067,628	+		CA265_RS16205	0.11	+0.5
4,067,629	-		CA265_RS16205	0.11	-0.4
4,067,761	+		CA265_RS16205	0.43	-0.1
4,067,762	-		CA265_RS16205	0.43	-0.7
4,067,762	-		CA265_RS16205	0.43	+0.2
4,067,824	-		CA265_RS16205	0.58	-0.5
4,067,825	+		CA265_RS16205	0.59	+0.2
4,067,829	+		CA265_RS16205	0.60	+0.0
4,067,867	+		CA265_RS16205	0.69	+0.3
4,067,902	+		CA265_RS16205	0.77	-0.5
4,067,964	+				+0.6
4,067,965	-				+2.5
4,067,968	-				-0.4
4,067,985	-				-0.0
4,068,074	+				+0.3
4,068,075	-				-0.8
4,068,075	-				+0.3
4,068,075	-				-0.5
4,068,118	-				+1.0
4,068,146	+				-0.7
4,068,148	+				+0.4
4,068,148	+				+0.3
4,068,148	+				-0.4
4,068,149	-				-0.1
4,068,149	-				-1.1
4,068,149	-				-1.0
4,068,152	+				+0.4
4,068,205	+				+0.9
4,068,205	+				+0.1
4,068,205	+				-0.2
4,068,205	+				-0.9
4,068,206	-				-0.6
4,068,291	-		CA265_RS16210	0.16	+0.5
4,068,296	-		CA265_RS16210	0.16	+0.9
4,068,388	+		CA265_RS16210	0.25	+0.4
4,068,388	+		CA265_RS16210	0.25	+0.1
4,068,388	+		CA265_RS16210	0.25	+0.8
4,068,473	+		CA265_RS16210	0.34	+1.1
4,068,509	-		CA265_RS16210	0.38	+0.4
4,068,528	-		CA265_RS16210	0.40	-1.8
4,068,596	+		CA265_RS16210	0.46	+0.8
4,068,596	+		CA265_RS16210	0.46	+0.5
4,068,599	+		CA265_RS16210	0.47	+0.1
4,068,619	-		CA265_RS16210	0.49	+0.6
4,068,677	+		CA265_RS16210	0.55	-0.9
4,068,678	-		CA265_RS16210	0.55	+0.2
4,068,712	-		CA265_RS16210	0.58	-0.0
4,068,725	+		CA265_RS16210	0.59	+0.2
4,068,752	+		CA265_RS16210	0.62	-0.1
4,068,840	-		CA265_RS16210	0.71	+0.5
4,068,840	-		CA265_RS16210	0.71	+0.3
4,068,931	-		CA265_RS16210	0.80	-0.3
4,068,932	+		CA265_RS16210	0.80	-0.4
4,069,012	+		CA265_RS16210	0.89	+0.4
4,069,013	-		CA265_RS16210	0.89	-0.1
4,069,013	-		CA265_RS16210	0.89	+0.0
4,069,106	-				-0.3
4,069,135	-				-0.4
4,069,169	+				+0.6
4,069,176	+				-0.9
4,069,176	+				+0.4
4,069,447	-				-0.6
4,069,483	+				-0.1
4,069,532	+				+1.1
4,069,532	+				-0.6
4,069,534	+				-0.2
4,069,634	+		CA265_RS16215	0.21	+0.6
4,069,638	+		CA265_RS16215	0.22	-0.2
4,069,647	-		CA265_RS16215	0.24	+0.4
4,069,658	+		CA265_RS16215	0.27	+0.4
4,069,717	+		CA265_RS16215	0.42	-0.1
4,069,730	+		CA265_RS16215	0.45	-0.0
4,069,733	+		CA265_RS16215	0.46	+1.2
4,069,753	+		CA265_RS16215	0.51	-0.1
4,069,756	+		CA265_RS16215	0.52	-0.3
4,069,799	+		CA265_RS16215	0.63	-0.8
4,069,800	-		CA265_RS16215	0.63	-1.0
4,069,810	+		CA265_RS16215	0.66	+0.2
4,069,810	+		CA265_RS16215	0.66	-0.1
4,069,841	+		CA265_RS16215	0.74	-0.6
4,069,857	-		CA265_RS16215	0.78	+0.8
4,069,969	+				-1.4
4,069,978	+				-0.6
4,069,979	-				+0.1
4,070,036	-				-0.3
4,070,075	-				+0.3