Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11760

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
2,912,926	+		CA265_RS11750	0.54	+0.5
2,913,110	+		CA265_RS11750	0.76	+0.0
2,913,111	-		CA265_RS11750	0.77	-0.5
2,913,200	+		CA265_RS11750	0.88	+0.2
2,913,237	+				-0.6
2,913,299	+				-0.8
2,913,409	+				+0.1
2,913,409	+				-0.6
2,913,409	+				+0.0
2,913,450	+		CA265_RS11755	0.15	+0.1
2,913,450	+		CA265_RS11755	0.15	+0.4
2,913,549	+		CA265_RS11755	0.31	+0.3
2,913,549	+		CA265_RS11755	0.31	+1.4
2,913,570	+		CA265_RS11755	0.34	-0.4
2,913,573	+		CA265_RS11755	0.35	+0.2
2,913,627	+		CA265_RS11755	0.44	-0.2
2,913,665	+		CA265_RS11755	0.50	+0.3
2,913,665	+		CA265_RS11755	0.50	-0.0
2,913,666	-		CA265_RS11755	0.50	-1.5
2,913,679	+		CA265_RS11755	0.53	-0.6
2,913,881	+				+0.9
2,913,882	-				-2.3
2,913,916	-				-2.2
2,913,926	+				+0.5
2,913,926	+				+0.4
2,913,964	+				-1.1
2,913,984	+				+0.3
2,913,994	-				-2.0
2,914,172	+		CA265_RS11760	0.16	-0.1
2,914,173	-		CA265_RS11760	0.16	-1.7
2,914,178	+		CA265_RS11760	0.17	-2.9
2,914,178	+		CA265_RS11760	0.17	-0.0
2,914,306	+		CA265_RS11760	0.23	+0.3
2,914,306	+		CA265_RS11760	0.23	+1.1
2,914,354	-		CA265_RS11760	0.26	-0.3
2,914,399	-		CA265_RS11760	0.28	-2.2
2,914,410	-		CA265_RS11760	0.28	-1.9
2,914,413	+		CA265_RS11760	0.29	-2.5
2,914,812	-		CA265_RS11760	0.49	-2.2
2,914,815	-		CA265_RS11760	0.49	-0.7
2,914,815	-		CA265_RS11760	0.49	-1.0
2,914,961	+		CA265_RS11760	0.57	+0.2
2,914,961	+		CA265_RS11760	0.57	+0.0
2,914,961	+		CA265_RS11760	0.57	+1.1
2,914,963	+		CA265_RS11760	0.57	+0.5
2,915,261	+		CA265_RS11760	0.72	-1.1
2,915,403	-		CA265_RS11760	0.79	-1.9
2,915,413	-		CA265_RS11760	0.80	-1.4
2,915,415	-		CA265_RS11760	0.80	-1.7
2,915,434	-		CA265_RS11760	0.81	-1.7
2,915,465	-		CA265_RS11760	0.82	-2.9
2,915,516	-		CA265_RS11760	0.85	-1.9
2,915,516	-		CA265_RS11760	0.85	-0.9
2,915,535	+		CA265_RS11760	0.86	-0.5
2,915,641	-				-0.5
2,915,741	+				+1.0
2,915,745	+				-0.2
2,915,745	+				-0.4
2,915,751	-				-0.9
2,915,755	+				+1.1
2,915,798	+				-0.3
2,915,812	-				-0.3
2,915,816	-				-0.8
2,915,823	-				-0.2
2,915,829	+				+0.4
2,915,844	+				-0.3
2,915,844	+				+0.3
2,915,845	-				-0.5
2,915,924	+		CA265_RS11765	0.13	-0.5
2,915,924	+		CA265_RS11765	0.13	+0.1
2,915,924	+		CA265_RS11765	0.13	+0.7
2,915,958	+		CA265_RS11765	0.17	-0.0
2,915,968	+		CA265_RS11765	0.18	-0.1
2,916,044	+		CA265_RS11765	0.27	+0.5
2,916,091	+		CA265_RS11765	0.33	+0.3
2,916,162	-		CA265_RS11765	0.41	-0.6
2,916,196	-		CA265_RS11765	0.45	-0.7
2,916,239	+		CA265_RS11765	0.50	-0.4
2,916,239	+		CA265_RS11765	0.50	-0.1
2,916,240	-		CA265_RS11765	0.50	-0.2
2,916,362	-		CA265_RS11765	0.65	+0.3
2,916,392	+		CA265_RS11765	0.68	+0.3
2,916,418	-		CA265_RS11765	0.71	-0.1
2,916,491	+		CA265_RS11765	0.80	-0.5
2,916,492	-		CA265_RS11765	0.80	+0.2
2,916,500	-		CA265_RS11765	0.81	-0.6
2,916,500	-		CA265_RS11765	0.81	-0.5
2,916,522	-		CA265_RS11765	0.84	-1.4
2,916,584	+				-0.3
2,916,646	-				-0.2
2,916,719	-				-0.0
2,916,719	-				-0.4
2,916,770	+				+0.5
2,916,771	-				-1.0
2,916,771	-				-3.2
2,916,786	-				-1.3