Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10940

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
2,691,089	+				-2.3
2,691,090	-				+0.6
2,691,093	+				+0.3
2,691,133	+		CA265_RS10935	0.12	-0.2
2,691,140	-		CA265_RS10935	0.13	-0.3
2,691,187	+		CA265_RS10935	0.26	+0.5
2,691,274	-		CA265_RS10935	0.48	+0.3
2,691,312	-		CA265_RS10935	0.58	-1.0
2,691,312	-		CA265_RS10935	0.58	-0.2
2,691,313	+		CA265_RS10935	0.58	-0.2
2,691,314	-		CA265_RS10935	0.58	-1.0
2,691,478	+				-0.7
2,691,622	+				+0.3
2,691,628	+				+0.7
2,691,629	-				+1.2
2,691,651	+				+1.4
2,691,739	-		CA265_RS10940	0.11	+0.9
2,691,865	+		CA265_RS10940	0.19	+1.3
2,691,866	-		CA265_RS10940	0.19	+0.7
2,691,866	-		CA265_RS10940	0.19	+1.2
2,691,866	-		CA265_RS10940	0.19	+1.1
2,691,912	+		CA265_RS10940	0.22	+1.1
2,691,912	+		CA265_RS10940	0.22	+1.7
2,691,923	+		CA265_RS10940	0.23	+0.6
2,691,923	+		CA265_RS10940	0.23	+1.7
2,691,924	-		CA265_RS10940	0.23	+1.6
2,692,004	-		CA265_RS10940	0.28	+0.3
2,692,004	-		CA265_RS10940	0.28	+1.3
2,692,006	-		CA265_RS10940	0.28	+1.3
2,692,080	+		CA265_RS10940	0.33	+1.3
2,692,180	+		CA265_RS10940	0.39	+1.0
2,692,221	+		CA265_RS10940	0.42	+1.4
2,692,347	+		CA265_RS10940	0.50	+1.0
2,692,348	-		CA265_RS10940	0.50	+0.5
2,692,435	+		CA265_RS10940	0.55	+1.6
2,692,436	-		CA265_RS10940	0.56	+1.3
2,692,521	+		CA265_RS10940	0.61	+2.9
2,692,521	+		CA265_RS10940	0.61	+0.2
2,692,680	-		CA265_RS10940	0.71	+0.8
2,692,813	-		CA265_RS10940	0.80	+1.0
2,692,822	-		CA265_RS10940	0.80	+1.1
2,692,839	-		CA265_RS10940	0.81	+1.8
2,692,869	-		CA265_RS10940	0.83	+0.9
2,692,883	-		CA265_RS10940	0.84	+0.1
2,692,969	-		CA265_RS10940	0.89	+0.6
2,692,988	-				+1.3
2,692,988	-				+1.4
2,693,073	+				+1.4
2,693,074	-				+1.2
2,693,157	-				+0.8
2,693,162	-				+1.8
2,693,178	-				+0.8
2,693,196	-				+0.6
2,693,200	-				+1.5
2,693,227	+				+0.7
2,693,245	-				+0.3
2,693,358	+		CA265_RS10945	0.14	-0.6
2,693,358	+		CA265_RS10945	0.14	+0.4
2,693,371	-		CA265_RS10945	0.15	-0.0
2,693,381	+		CA265_RS10945	0.15	+0.5
2,693,469	+		CA265_RS10945	0.22	+0.4
2,693,473	+		CA265_RS10945	0.22	-0.1
2,693,473	+		CA265_RS10945	0.22	-0.1
2,693,473	+		CA265_RS10945	0.22	+0.2
2,693,473	+		CA265_RS10945	0.22	+0.3
2,693,474	-		CA265_RS10945	0.22	+0.2
2,693,474	-		CA265_RS10945	0.22	-0.2
2,693,474	-		CA265_RS10945	0.22	+0.7
2,693,509	+		CA265_RS10945	0.24	+0.2
2,693,564	-		CA265_RS10945	0.28	-0.0
2,693,623	+		CA265_RS10945	0.33	-0.3
2,693,623	+		CA265_RS10945	0.33	+0.1
2,693,624	-		CA265_RS10945	0.33	-0.3
2,693,624	-		CA265_RS10945	0.33	+1.3
2,693,662	+		CA265_RS10945	0.35	-1.8
2,693,663	-		CA265_RS10945	0.35	+0.1
2,693,679	+		CA265_RS10945	0.37	-0.7
2,693,720	+		CA265_RS10945	0.39	+0.1
2,693,733	-		CA265_RS10945	0.40	+0.2
2,693,749	+		CA265_RS10945	0.41	-0.4
2,693,750	-		CA265_RS10945	0.42	-0.5
2,693,750	-		CA265_RS10945	0.42	+3.3
2,693,776	+		CA265_RS10945	0.43	-0.1
2,693,776	+		CA265_RS10945	0.43	-0.5
2,693,776	+		CA265_RS10945	0.43	+0.3
2,693,777	-		CA265_RS10945	0.43	+0.2
2,693,810	+		CA265_RS10945	0.46	-0.3
2,693,861	+		CA265_RS10945	0.49	-0.6
2,693,862	-		CA265_RS10945	0.50	-0.3
2,693,866	-		CA265_RS10945	0.50	-0.5
2,693,903	+		CA265_RS10945	0.52	-0.3
2,693,926	+		CA265_RS10945	0.54	-0.1
2,693,979	+		CA265_RS10945	0.58	-0.0
2,694,075	-		CA265_RS10945	0.65	-0.4
2,694,124	-		CA265_RS10945	0.68	+0.2
2,694,124	-		CA265_RS10945	0.68	+0.2