Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10295

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
2,540,290	+		CA265_RS10290	0.32	-0.1
2,540,306	-		CA265_RS10290	0.34	+0.5
2,540,404	+		CA265_RS10290	0.42	-0.2
2,540,500	-		CA265_RS10290	0.49	+0.0
2,540,616	+		CA265_RS10290	0.59	+0.2
2,540,616	+		CA265_RS10290	0.59	-0.6
2,540,617	-		CA265_RS10290	0.59	-0.8
2,540,663	-		CA265_RS10290	0.63	-0.1
2,540,819	+		CA265_RS10290	0.75	-0.2
2,540,851	-		CA265_RS10290	0.78	+0.1
2,540,854	-		CA265_RS10290	0.78	-0.1
2,540,854	-		CA265_RS10290	0.78	+0.7
2,540,924	+		CA265_RS10290	0.84	+0.6
2,540,925	-		CA265_RS10290	0.84	+0.4
2,540,958	+		CA265_RS10290	0.87	-1.1
2,540,958	+		CA265_RS10290	0.87	+0.0
2,540,958	+		CA265_RS10290	0.87	-2.3
2,540,959	-		CA265_RS10290	0.87	+0.1
2,540,959	-		CA265_RS10290	0.87	+0.5
2,540,959	-		CA265_RS10290	0.87	+0.2
2,540,964	-		CA265_RS10290	0.87	+0.3
2,540,964	-		CA265_RS10290	0.87	-0.3
2,541,022	-				+0.4
2,541,044	+				+0.1
2,541,112	-				-2.1
2,541,112	-				-0.5
2,541,235	-				+0.3
2,541,266	+				+1.6
2,541,371	+				-0.7
2,541,373	+				+0.1
2,541,554	+		CA265_RS10295	0.17	-0.7
2,541,554	+		CA265_RS10295	0.17	+1.7
2,541,554	+		CA265_RS10295	0.17	+0.5
2,541,555	-		CA265_RS10295	0.17	-1.1
2,541,564	-		CA265_RS10295	0.17	-0.2
2,541,594	+		CA265_RS10295	0.19	+0.3
2,541,599	-		CA265_RS10295	0.19	+0.2
2,541,599	-		CA265_RS10295	0.19	+0.2
2,541,647	+		CA265_RS10295	0.22	+0.2
2,541,648	-		CA265_RS10295	0.22	-0.5
2,541,816	+		CA265_RS10295	0.30	+0.6
2,541,817	-		CA265_RS10295	0.30	+0.0
2,541,817	-		CA265_RS10295	0.30	+0.8
2,541,817	-		CA265_RS10295	0.30	-0.1
2,541,820	-		CA265_RS10295	0.31	+0.1
2,541,889	+		CA265_RS10295	0.34	+0.7
2,541,957	+		CA265_RS10295	0.38	+0.2
2,541,958	-		CA265_RS10295	0.38	+1.2
2,541,982	+		CA265_RS10295	0.39	-0.5
2,542,047	+		CA265_RS10295	0.42	+0.2
2,542,048	-		CA265_RS10295	0.42	+0.7
2,542,067	+		CA265_RS10295	0.43	-0.8
2,542,102	+		CA265_RS10295	0.45	-0.2
2,542,150	-		CA265_RS10295	0.48	+0.2
2,542,150	-		CA265_RS10295	0.48	+1.3
2,542,153	+		CA265_RS10295	0.48	+0.4
2,542,221	-		CA265_RS10295	0.51	-0.0
2,542,221	-		CA265_RS10295	0.51	+0.6
2,542,285	-		CA265_RS10295	0.55	+0.1
2,542,285	-		CA265_RS10295	0.55	+1.8
2,542,292	-		CA265_RS10295	0.55	+0.4
2,542,365	+		CA265_RS10295	0.59	-1.4
2,542,365	+		CA265_RS10295	0.59	+0.4
2,542,365	+		CA265_RS10295	0.59	+0.7
2,542,396	+		CA265_RS10295	0.60	-0.4
2,542,455	-		CA265_RS10295	0.64	+0.0
2,542,457	+		CA265_RS10295	0.64	-1.2
2,542,547	-		CA265_RS10295	0.68	+0.1
2,542,570	+		CA265_RS10295	0.70	+0.2
2,542,573	-		CA265_RS10295	0.70	+0.0
2,542,611	-		CA265_RS10295	0.72	+0.3
2,542,649	-		CA265_RS10295	0.74	+1.2
2,542,669	-		CA265_RS10295	0.75	-0.8
2,542,686	+		CA265_RS10295	0.76	-0.5
2,542,687	-		CA265_RS10295	0.76	+0.3
2,542,687	-		CA265_RS10295	0.76	-0.1
2,542,695	+		CA265_RS10295	0.76	-0.0
2,542,756	+		CA265_RS10295	0.79	-0.7
2,542,768	+		CA265_RS10295	0.80	+0.6
2,542,781	-		CA265_RS10295	0.80	+0.5
2,542,781	-		CA265_RS10295	0.80	+0.7
2,542,816	-		CA265_RS10295	0.82	+0.8
2,542,924	+		CA265_RS10295	0.88	-0.4
2,542,925	-		CA265_RS10295	0.88	-0.7
2,542,954	+		CA265_RS10295	0.89	+0.2
2,543,001	+				+0.3
2,543,002	-				-0.2
2,543,010	+				-0.2
2,543,016	+				-1.3
2,543,017	-				-0.3
2,543,050	-				+0.2
2,543,102	+				+0.5
2,543,102	+				-0.0
2,543,103	-				-0.2
2,543,103	-				-0.2
2,543,136	+				-0.3
2,543,167	+				-0.2
2,543,195	-				+0.3
2,543,203	+				+0.1
2,543,251	-				+1.2
2,543,311	+				+0.5
2,543,340	+				-0.2
2,543,520	+		CA265_RS10300	0.11	-1.5
2,543,530	-		CA265_RS10300	0.12	+0.1
2,543,530	-		CA265_RS10300	0.12	-1.5
2,543,633	+		CA265_RS10300	0.15	-0.0
2,543,657	+		CA265_RS10300	0.16	+0.2
2,543,660	-		CA265_RS10300	0.16	+0.6
2,543,690	+		CA265_RS10300	0.17	+0.3
2,543,698	-		CA265_RS10300	0.17	+0.6
2,543,724	+		CA265_RS10300	0.18	+0.4
2,543,743	-		CA265_RS10300	0.18	+0.1
2,543,743	-		CA265_RS10300	0.18	-0.2
2,543,743	-		CA265_RS10300	0.18	+0.5
2,543,743	-		CA265_RS10300	0.18	+0.2
2,543,745	+		CA265_RS10300	0.18	-0.6
2,543,766	+		CA265_RS10300	0.19	-0.0
2,543,804	-		CA265_RS10300	0.20	-0.9
2,543,882	+		CA265_RS10300	0.23	-0.4
2,543,882	+		CA265_RS10300	0.23	+0.4
2,543,913	+		CA265_RS10300	0.24	+0.3
2,543,976	+		CA265_RS10300	0.26	-0.2
2,543,982	+		CA265_RS10300	0.26	-0.3
2,543,985	-		CA265_RS10300	0.26	+0.4
2,544,050	-		CA265_RS10300	0.28	+0.1
2,544,085	-		CA265_RS10300	0.29	-0.3
2,544,086	+		CA265_RS10300	0.29	+0.1
2,544,086	+		CA265_RS10300	0.29	+0.3
2,544,087	-		CA265_RS10300	0.29	-0.4
2,544,087	-		CA265_RS10300	0.29	+0.1
2,544,091	-		CA265_RS10300	0.29	-0.3
2,544,091	-		CA265_RS10300	0.29	-0.4
2,544,096	-		CA265_RS10300	0.30	-0.1
2,544,110	+		CA265_RS10300	0.30	+0.4
2,544,112	+		CA265_RS10300	0.30	+0.6
2,544,124	+		CA265_RS10300	0.30	+0.0