Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10290

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
2,538,953	-		CA265_RS10285	0.25	+1.2
2,538,953	-		CA265_RS10285	0.25	-0.2
2,538,970	-		CA265_RS10285	0.27	+1.2
2,538,973	+		CA265_RS10285	0.27	-0.3
2,538,973	+		CA265_RS10285	0.27	-0.5
2,538,973	+		CA265_RS10285	0.27	+1.0
2,538,974	-		CA265_RS10285	0.27	+0.5
2,538,979	-		CA265_RS10285	0.27	+0.7
2,538,979	-		CA265_RS10285	0.27	+1.3
2,538,997	+		CA265_RS10285	0.29	+0.7
2,538,998	-		CA265_RS10285	0.29	+0.3
2,538,998	-		CA265_RS10285	0.29	+0.7
2,539,008	+		CA265_RS10285	0.30	+0.2
2,539,009	-		CA265_RS10285	0.30	-0.6
2,539,009	-		CA265_RS10285	0.30	+0.1
2,539,100	+		CA265_RS10285	0.37	+0.2
2,539,101	-		CA265_RS10285	0.37	+0.6
2,539,157	-		CA265_RS10285	0.42	+0.5
2,539,233	-		CA265_RS10285	0.48	+0.8
2,539,249	-		CA265_RS10285	0.49	-0.1
2,539,251	+		CA265_RS10285	0.50	-0.5
2,539,266	+		CA265_RS10285	0.51	+0.4
2,539,269	-		CA265_RS10285	0.51	+0.5
2,539,269	-		CA265_RS10285	0.51	-0.0
2,539,284	+		CA265_RS10285	0.52	-0.3
2,539,312	-		CA265_RS10285	0.55	-3.7
2,539,324	-		CA265_RS10285	0.56	+0.0
2,539,332	+		CA265_RS10285	0.56	-1.1
2,539,338	+		CA265_RS10285	0.57	-0.2
2,539,340	+		CA265_RS10285	0.57	+0.1
2,539,419	-		CA265_RS10285	0.63	-0.2
2,539,437	-		CA265_RS10285	0.65	+2.6
2,539,463	+		CA265_RS10285	0.67	+0.0
2,539,466	-		CA265_RS10285	0.67	+0.7
2,539,529	+		CA265_RS10285	0.72	+0.0
2,539,551	-		CA265_RS10285	0.74	+0.0
2,539,554	+		CA265_RS10285	0.74	+0.0
2,539,554	+		CA265_RS10285	0.74	-0.3
2,539,554	+		CA265_RS10285	0.74	+0.1
2,539,555	-		CA265_RS10285	0.74	-0.7
2,539,555	-		CA265_RS10285	0.74	-0.1
2,539,555	-		CA265_RS10285	0.74	+0.0
2,539,603	-		CA265_RS10285	0.78	-0.0
2,539,642	-		CA265_RS10285	0.82	+0.1
2,539,658	+		CA265_RS10285	0.83	-0.1
2,539,658	+		CA265_RS10285	0.83	+0.4
2,539,658	+		CA265_RS10285	0.83	+0.2
2,539,659	-		CA265_RS10285	0.83	-1.3
2,539,659	-		CA265_RS10285	0.83	-0.6
2,539,659	-		CA265_RS10285	0.83	+1.2
2,539,662	+		CA265_RS10285	0.83	-0.2
2,539,662	+		CA265_RS10285	0.83	-0.1
2,539,666	+		CA265_RS10285	0.84	+0.6
2,539,809	+				-0.0
2,539,810	-				+0.3
2,539,810	-				-0.0
2,539,814	-				+0.5
2,539,886	+				+0.2
2,539,886	+				-0.2
2,539,891	+				+0.2
2,539,895	+				+0.2
2,539,941	+				-0.5
2,540,017	+		CA265_RS10290	0.10	+0.3
2,540,017	+		CA265_RS10290	0.10	-0.1
2,540,049	+		CA265_RS10290	0.13	-1.0
2,540,050	-		CA265_RS10290	0.13	+1.0
2,540,176	+		CA265_RS10290	0.23	-0.6
2,540,200	+		CA265_RS10290	0.25	-1.1
2,540,201	-		CA265_RS10290	0.25	+0.3
2,540,290	+		CA265_RS10290	0.32	-0.1
2,540,306	-		CA265_RS10290	0.34	+0.5
2,540,404	+		CA265_RS10290	0.42	-0.2
2,540,500	-		CA265_RS10290	0.49	+0.0
2,540,616	+		CA265_RS10290	0.59	+0.2
2,540,616	+		CA265_RS10290	0.59	-0.6
2,540,617	-		CA265_RS10290	0.59	-0.8
2,540,663	-		CA265_RS10290	0.63	-0.1
2,540,819	+		CA265_RS10290	0.75	-0.2
2,540,851	-		CA265_RS10290	0.78	+0.1
2,540,854	-		CA265_RS10290	0.78	-0.1
2,540,854	-		CA265_RS10290	0.78	+0.7
2,540,924	+		CA265_RS10290	0.84	+0.6
2,540,925	-		CA265_RS10290	0.84	+0.4
2,540,958	+		CA265_RS10290	0.87	-1.1
2,540,958	+		CA265_RS10290	0.87	+0.0
2,540,958	+		CA265_RS10290	0.87	-2.3
2,540,959	-		CA265_RS10290	0.87	+0.1
2,540,959	-		CA265_RS10290	0.87	+0.5
2,540,959	-		CA265_RS10290	0.87	+0.2
2,540,964	-		CA265_RS10290	0.87	+0.3
2,540,964	-		CA265_RS10290	0.87	-0.3
2,541,022	-				+0.4
2,541,044	+				+0.1
2,541,112	-				-2.1
2,541,112	-				-0.5
2,541,235	-				+0.3
2,541,266	+				+1.6
2,541,371	+				-0.7
2,541,373	+				+0.1
2,541,554	+		CA265_RS10295	0.17	-0.7
2,541,554	+		CA265_RS10295	0.17	+1.7
2,541,554	+		CA265_RS10295	0.17	+0.5
2,541,555	-		CA265_RS10295	0.17	-1.1
2,541,564	-		CA265_RS10295	0.17	-0.2
2,541,594	+		CA265_RS10295	0.19	+0.3
2,541,599	-		CA265_RS10295	0.19	+0.2
2,541,599	-		CA265_RS10295	0.19	+0.2
2,541,647	+		CA265_RS10295	0.22	+0.2
2,541,648	-		CA265_RS10295	0.22	-0.5
2,541,816	+		CA265_RS10295	0.30	+0.6
2,541,817	-		CA265_RS10295	0.30	+0.0
2,541,817	-		CA265_RS10295	0.30	+0.8
2,541,817	-		CA265_RS10295	0.30	-0.1
2,541,820	-		CA265_RS10295	0.31	+0.1
2,541,889	+		CA265_RS10295	0.34	+0.7
2,541,957	+		CA265_RS10295	0.38	+0.2
2,541,958	-		CA265_RS10295	0.38	+1.2
2,541,982	+		CA265_RS10295	0.39	-0.5
2,542,047	+		CA265_RS10295	0.42	+0.2
2,542,048	-		CA265_RS10295	0.42	+0.7
2,542,067	+		CA265_RS10295	0.43	-0.8
2,542,102	+		CA265_RS10295	0.45	-0.2