Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06805

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
1,686,374	+		CA265_RS06800	0.52	-0.7
1,686,377	+		CA265_RS06800	0.52	+0.4
1,686,378	-		CA265_RS06800	0.53	-0.2
1,686,380	-		CA265_RS06800	0.53	-1.1
1,686,380	-		CA265_RS06800	0.53	+0.7
1,686,384	-		CA265_RS06800	0.53	+0.4
1,686,388	+		CA265_RS06800	0.53	-0.2
1,686,403	-		CA265_RS06800	0.54	+0.0
1,686,404	+		CA265_RS06800	0.54	+0.2
1,686,405	-		CA265_RS06800	0.54	-0.0
1,686,440	+		CA265_RS06800	0.56	-0.2
1,686,440	+		CA265_RS06800	0.56	-0.7
1,686,441	-		CA265_RS06800	0.56	-0.5
1,686,508	-		CA265_RS06800	0.59	+0.5
1,686,508	-		CA265_RS06800	0.59	-0.3
1,686,564	-		CA265_RS06800	0.62	-0.0
1,686,603	+		CA265_RS06800	0.64	+0.6
1,686,604	-		CA265_RS06800	0.64	+0.3
1,686,655	-		CA265_RS06800	0.66	-0.4
1,686,659	-		CA265_RS06800	0.67	+0.0
1,686,694	+		CA265_RS06800	0.68	+0.0
1,686,694	+		CA265_RS06800	0.68	-0.9
1,686,728	-		CA265_RS06800	0.70	+0.1
1,686,764	-		CA265_RS06800	0.72	+0.5
1,686,790	-		CA265_RS06800	0.73	-0.6
1,686,794	-		CA265_RS06800	0.73	+0.8
1,686,811	+		CA265_RS06800	0.74	-0.2
1,686,849	+		CA265_RS06800	0.76	+0.7
1,686,857	-		CA265_RS06800	0.76	+0.9
1,686,857	-		CA265_RS06800	0.76	+0.7
1,686,864	-		CA265_RS06800	0.77	-0.6
1,686,911	-		CA265_RS06800	0.79	+1.8
1,687,024	+		CA265_RS06800	0.85	+1.2
1,687,144	+				-0.0
1,687,174	+				+0.0
1,687,220	+				+0.2
1,687,245	+				+0.6
1,687,245	+				+0.6
1,687,246	-				-0.2
1,687,298	-				+0.4
1,687,333	-				+0.3
1,687,361	+				+0.2
1,687,361	+				-1.2
1,687,381	+				+0.1
1,687,384	+				-0.4
1,687,384	+				-0.3
1,687,446	-				+0.0
1,687,473	-		CA265_RS06805	0.12	-0.2
1,687,593	-		CA265_RS06805	0.24	+0.2
1,687,626	-		CA265_RS06805	0.27	-0.0
1,687,631	+		CA265_RS06805	0.27	-0.0
1,687,632	-		CA265_RS06805	0.28	+0.1
1,687,649	-		CA265_RS06805	0.29	-0.6
1,687,704	-		CA265_RS06805	0.34	-0.3
1,687,724	+		CA265_RS06805	0.36	+0.2
1,687,736	+		CA265_RS06805	0.38	+0.8
1,687,737	-		CA265_RS06805	0.38	-0.4
1,687,746	-		CA265_RS06805	0.39	+0.2
1,687,769	+		CA265_RS06805	0.41	+0.9
1,687,868	+		CA265_RS06805	0.50	-0.3
1,687,878	-		CA265_RS06805	0.51	-0.1
1,687,898	+		CA265_RS06805	0.53	+0.6
1,687,899	-		CA265_RS06805	0.53	+0.4
1,687,936	+		CA265_RS06805	0.57	+0.6
1,687,965	+		CA265_RS06805	0.60	-0.1
1,687,967	+		CA265_RS06805	0.60	+1.8
1,687,968	-		CA265_RS06805	0.60	+1.1
1,688,010	+		CA265_RS06805	0.64	+0.5
1,688,021	+		CA265_RS06805	0.65	+0.8
1,688,043	-		CA265_RS06805	0.67	-1.2
1,688,088	+		CA265_RS06805	0.72	-0.5
1,688,089	-		CA265_RS06805	0.72	+0.6
1,688,090	+		CA265_RS06805	0.72	+0.9
1,688,090	+		CA265_RS06805	0.72	+0.9
1,688,090	+		CA265_RS06805	0.72	+0.8
1,688,090	+		CA265_RS06805	0.72	+0.8
1,688,262	-		CA265_RS06805	0.88	+0.5
1,688,284	+				+0.2
1,688,348	-				+0.4
1,688,576	+		CA265_RS06810	0.11	+0.5
1,688,588	+		CA265_RS06810	0.12	+0.0
1,688,701	-		CA265_RS06810	0.20	+0.4
1,688,702	+		CA265_RS06810	0.20	+0.7
1,688,703	-		CA265_RS06810	0.20	-0.3
1,688,765	-		CA265_RS06810	0.25	+0.1
1,688,800	+		CA265_RS06810	0.28	+1.2
1,688,815	-		CA265_RS06810	0.29	-0.1
1,688,815	-		CA265_RS06810	0.29	-0.3
1,688,843	-		CA265_RS06810	0.31	-0.5
1,688,910	-		CA265_RS06810	0.36	+1.1
1,688,972	+		CA265_RS06810	0.41	+0.1
1,688,999	+		CA265_RS06810	0.43	+0.7
1,689,005	+		CA265_RS06810	0.43	-0.9
1,689,005	+		CA265_RS06810	0.43	-0.5
1,689,006	-		CA265_RS06810	0.43	+0.0
1,689,033	+		CA265_RS06810	0.45	-0.3
1,689,033	+		CA265_RS06810	0.45	+0.5
1,689,034	-		CA265_RS06810	0.45	+0.4
1,689,060	-		CA265_RS06810	0.47	+0.1
1,689,092	-		CA265_RS06810	0.50	+0.5
1,689,132	+		CA265_RS06810	0.53	+0.3
1,689,132	+		CA265_RS06810	0.53	-0.0
1,689,207	-		CA265_RS06810	0.58	-0.3
1,689,237	+		CA265_RS06810	0.61	+0.7
1,689,256	-		CA265_RS06810	0.62	-0.5
1,689,327	-		CA265_RS06810	0.67	-0.3