Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2608 and Ac3H11_2609 are separated by 78 nucleotides Ac3H11_2609 and Ac3H11_2610 are separated by 42 nucleotides Ac3H11_2610 and Ac3H11_2611 overlap by 45 nucleotides Ac3H11_2611 and Ac3H11_2612 overlap by 44 nucleotides
Ac3H11_2608 - Amidophosphoribosyltransferase (EC 2.4.2.14), at 892,210 to 893,715
_2608
Ac3H11_2609 - Colicin V production protein, at 893,794 to 894,282
_2609
Ac3H11_2610 - DedD protein, at 894,325 to 895,173
_2610
Ac3H11_2611 - hypothetical protein, at 895,129 to 895,251
_2611
Ac3H11_2612 - Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17), at 895,208 to 896,533
_2612
Position (kb) 894
895
896 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 893.448 kb on - strand, within Ac3H11_2608 at 893.448 kb on - strand, within Ac3H11_2608 at 893.475 kb on - strand, within Ac3H11_2608 at 893.475 kb on - strand, within Ac3H11_2608 at 893.475 kb on - strand, within Ac3H11_2608 at 893.475 kb on - strand, within Ac3H11_2608 at 893.664 kb on - strand at 893.664 kb on - strand at 893.716 kb on - strand at 893.716 kb on - strand at 893.719 kb on - strand at 893.719 kb on - strand at 893.719 kb on - strand at 893.719 kb on - strand at 893.719 kb on - strand at 893.793 kb on - strand at 894.327 kb on - strand at 894.327 kb on - strand at 894.462 kb on - strand, within Ac3H11_2610 at 895.179 kb on - strand, within Ac3H11_2611 at 895.179 kb on - strand, within Ac3H11_2611 at 895.179 kb on - strand, within Ac3H11_2611
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 893,448 - Ac3H11_2608 0.82 -1.1 893,448 - Ac3H11_2608 0.82 -2.7 893,475 - Ac3H11_2608 0.84 -3.7 893,475 - Ac3H11_2608 0.84 -0.3 893,475 - Ac3H11_2608 0.84 -3.3 893,475 - Ac3H11_2608 0.84 -4.3 893,664 - -3.2 893,664 - -3.5 893,716 - -1.3 893,716 - -1.2 893,719 - -0.3 893,719 - -1.0 893,719 - -0.7 893,719 - -1.8 893,719 - -0.8 893,793 - +0.6 894,327 - +1.1 894,327 - -0.6 894,462 - Ac3H11_2610 0.16 +1.9 895,179 - Ac3H11_2611 0.41 +0.6 895,179 - Ac3H11_2611 0.41 -0.1 895,179 - Ac3H11_2611 0.41 -0.2
Or see this region's nucleotide sequence