Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27905

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
6,087,063	+		AO353_27900	0.27	+0.8
6,087,063	+		AO353_27900	0.27	+0.5
6,087,064	-		AO353_27900	0.27	-0.2
6,087,064	-		AO353_27900	0.27	-0.7
6,087,064	-		AO353_27900	0.27	+0.3
6,087,064	-		AO353_27900	0.27	+1.1
6,087,276	-		AO353_27900	0.43	-0.4
6,087,470	+		AO353_27900	0.57	-0.2
6,087,470	+		AO353_27900	0.57	-1.1
6,087,470	+		AO353_27900	0.57	+0.5
6,087,471	-		AO353_27900	0.57	-0.3
6,087,471	-		AO353_27900	0.57	+0.1
6,087,471	-		AO353_27900	0.57	+0.3
6,087,471	-		AO353_27900	0.57	-0.4
6,087,536	+		AO353_27900	0.62	-1.4
6,087,536	+		AO353_27900	0.62	+0.2
6,087,536	+		AO353_27900	0.62	+0.2
6,087,536	+		AO353_27900	0.62	+1.1
6,087,537	-		AO353_27900	0.62	+0.4
6,087,581	+		AO353_27900	0.65	+1.1
6,087,617	+		AO353_27900	0.68	+0.2
6,087,618	-		AO353_27900	0.68	-0.9
6,087,704	+		AO353_27900	0.74	+0.9
6,087,704	+		AO353_27900	0.74	+2.8
6,087,704	+		AO353_27900	0.74	+2.0
6,087,704	+		AO353_27900	0.74	+1.4
6,087,704	+		AO353_27900	0.74	+1.6
6,087,705	-		AO353_27900	0.74	-1.6
6,087,705	-		AO353_27900	0.74	-0.2
6,087,705	-		AO353_27900	0.74	-0.5
6,087,705	-		AO353_27900	0.74	-0.2
6,087,705	-		AO353_27900	0.74	-1.2
6,087,705	-		AO353_27900	0.74	-0.4
6,087,705	-		AO353_27900	0.74	+0.9
6,087,965	+				+1.2
6,087,965	+				+1.1
6,087,965	+				-1.0
6,087,965	+				+1.2
6,087,965	+				+1.4
6,087,965	+				+1.0
6,087,966	-				+0.9
6,087,966	-				+0.3
6,087,966	-				+0.5
6,087,966	-				+0.8
6,088,034	+				+0.4
6,088,034	+				-0.7
6,088,034	+				+0.4
6,088,035	-				-0.4
6,088,035	-				-0.4
6,088,035	-				-0.0
6,088,035	-				+1.6
6,088,035	-				+0.1
6,088,071	+				+1.1
6,088,071	+				-0.2
6,088,072	-				+0.8
6,088,087	-				+0.8
6,088,149	+		AO353_27905	0.15	+0.3
6,088,150	-		AO353_27905	0.15	-0.7
6,088,284	+		AO353_27905	0.33	-0.0
6,088,284	+		AO353_27905	0.33	+0.4
6,088,284	+		AO353_27905	0.33	+0.3
6,088,284	+		AO353_27905	0.33	+0.5
6,088,284	+		AO353_27905	0.33	+1.1
6,088,285	-		AO353_27905	0.33	+0.9
6,088,518	+		AO353_27905	0.64	+0.8
6,088,518	+		AO353_27905	0.64	+1.2
6,088,519	-		AO353_27905	0.64	-0.9
6,088,519	-		AO353_27905	0.64	-1.2
6,088,558	-		AO353_27905	0.69	+0.4
6,088,558	-		AO353_27905	0.69	+0.6
6,088,575	+				+2.6
6,088,575	+		AO353_27905	0.72	+1.4
6,088,608	+		AO353_27905	0.76	+1.6
6,088,638	+		AO353_27905	0.80	+2.4
6,088,639	-		AO353_27905	0.80	-1.4
6,088,767	+				+1.4
6,088,767	+				+1.1
6,088,785	+				+1.6
6,088,786	-				-0.3
6,088,824	+				+0.9
6,088,824	+				+1.9
6,088,824	+				+2.5
6,088,824	+				+1.1
6,088,838	+				+1.5
6,088,838	+				+1.2
6,088,839	-				+0.4
6,088,844	+				+1.3
6,088,844	+				+0.9
6,088,844	+				+1.1
6,088,845	-				+0.2
6,088,845	-				-0.3
6,088,845	-				+1.3
6,088,845	-				+0.3
6,088,845	-				-0.4
6,088,845	-				-0.7
6,088,867	+				+0.4
6,088,868	-				+0.3
6,088,868	-				-0.1
6,088,878	+				+1.6
6,088,913	+				+1.2
6,088,913	+				+0.8
6,088,913	+				+0.4
6,088,913	+				+1.0
6,088,913	+				+1.0
6,088,914	-				-0.8
6,088,914	-				-1.8
6,088,914	-				+0.3
6,088,914	-				-0.6
6,088,914	-				+0.1
6,088,938	+				-0.3
6,088,939	-				+0.3
6,088,939	-				-1.5
6,088,939	-				+0.9
6,088,939	-				+1.4
6,088,952	+				+0.1
6,089,040	+				+0.2
6,089,042	+				+0.4
6,089,042	+				-0.2
6,089,042	+				-0.2
6,089,048	+				-0.1
6,089,049	-				+0.6
6,089,049	-				+0.3
6,089,087	+		AO353_27910	0.12	-0.9
6,089,087	+		AO353_27910	0.12	-0.0
6,089,088	-		AO353_27910	0.12	-1.4
6,089,088	-		AO353_27910	0.12	-0.7
6,089,088	-		AO353_27910	0.12	+1.4
6,089,171	+		AO353_27910	0.18	+1.2
6,089,171	+		AO353_27910	0.18	-0.1
6,089,172	-		AO353_27910	0.18	+0.2
6,089,172	-		AO353_27910	0.18	-0.1
6,089,172	-		AO353_27910	0.18	-0.6
6,089,172	-		AO353_27910	0.18	+0.2
6,089,172	-		AO353_27910	0.18	-1.2
6,089,172	-		AO353_27910	0.18	-0.1
6,089,177	+		AO353_27910	0.18	+1.2
6,089,177	+		AO353_27910	0.18	+0.4
6,089,177	+		AO353_27910	0.18	-0.1
6,089,177	+		AO353_27910	0.18	-0.0
6,089,178	-		AO353_27910	0.18	-0.5
6,089,178	-		AO353_27910	0.18	+2.6
6,089,178	-		AO353_27910	0.18	-0.2
6,089,264	+		AO353_27910	0.25	-0.9
6,089,264	+		AO353_27910	0.25	-0.1
6,089,264	+		AO353_27910	0.25	+0.1
6,089,264	+		AO353_27910	0.25	-0.2
6,089,264	+		AO353_27910	0.25	+0.1
6,089,264	+		AO353_27910	0.25	+0.1
6,089,264	+		AO353_27910	0.25	-1.3
6,089,264	+		AO353_27910	0.25	+0.2
6,089,264	+		AO353_27910	0.25	+0.6
6,089,264	+		AO353_27910	0.25	+0.9
6,089,264	+		AO353_27910	0.25	+0.1
6,089,264	+		AO353_27910	0.25	+0.8
6,089,264	+		AO353_27910	0.25	+0.4
6,089,264	+		AO353_27910	0.25	-0.0
6,089,264	+		AO353_27910	0.25	-0.6
6,089,264	+		AO353_27910	0.25	+0.2
6,089,270	+		AO353_27910	0.25	+0.4
6,089,441	+		AO353_27910	0.38	-1.1
6,089,441	+		AO353_27910	0.38	-0.2
6,089,442	-		AO353_27910	0.38	-0.4
6,089,442	-		AO353_27910	0.38	-1.1
6,089,442	-		AO353_27910	0.38	-0.5
6,089,501	+		AO353_27910	0.42	-0.5
6,089,501	+		AO353_27910	0.42	+1.0
6,089,502	-		AO353_27910	0.42	+0.1
6,089,568	+		AO353_27910	0.47	-0.6
6,089,569	-		AO353_27910	0.47	-0.1
6,089,744	+		AO353_27910	0.60	+0.9