Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17535

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,867,234	+		AO353_17530	0.24	+1.7
3,867,234	+		AO353_17530	0.24	-0.0
3,867,234	+		AO353_17530	0.24	-1.4
3,867,234	+		AO353_17530	0.24	-1.0
3,867,234	+		AO353_17530	0.24	-0.5
3,867,235	-		AO353_17530	0.24	+0.2
3,867,297	+		AO353_17530	0.31	-0.0
3,867,297	+		AO353_17530	0.31	+0.1
3,867,298	-		AO353_17530	0.31	-0.2
3,867,298	-		AO353_17530	0.31	-1.5
3,867,298	-		AO353_17530	0.31	+0.0
3,867,298	-		AO353_17530	0.31	-0.7
3,867,320	+		AO353_17530	0.34	-0.5
3,867,320	+		AO353_17530	0.34	+0.4
3,867,320	+		AO353_17530	0.34	-0.4
3,867,320	+		AO353_17530	0.34	-1.5
3,867,320	+		AO353_17530	0.34	-1.2
3,867,320	+		AO353_17530	0.34	-0.0
3,867,321	-		AO353_17530	0.34	-0.1
3,867,321	-		AO353_17530	0.34	+1.2
3,867,321	-		AO353_17530	0.34	+1.6
3,867,321	-		AO353_17530	0.34	-2.0
3,867,384	+		AO353_17530	0.41	+0.8
3,867,384	+		AO353_17530	0.41	-0.6
3,867,384	+		AO353_17530	0.41	-1.1
3,867,384	+		AO353_17530	0.41	+1.0
3,867,384	+		AO353_17530	0.41	+1.6
3,867,385	-		AO353_17530	0.41	+0.6
3,867,385	-		AO353_17530	0.41	+0.0
3,867,475	-		AO353_17530	0.51	-1.5
3,867,475	-		AO353_17530	0.51	+0.7
3,867,495	+		AO353_17530	0.53	-0.6
3,867,495	+		AO353_17530	0.53	-0.0
3,867,732	+		AO353_17530	0.80	+0.1
3,867,733	-		AO353_17530	0.80	-0.1
3,867,790	+		AO353_17530	0.87	-0.5
3,867,846	+				-1.1
3,867,878	+				+0.3
3,867,878	+				-0.5
3,867,878	+				-0.0
3,867,878	+				+0.3
3,867,878	+				+0.1
3,867,878	+				-0.2
3,867,878	+				-1.7
3,867,878	+				+0.4
3,867,878	+				-0.5
3,867,878	+				-0.4
3,867,878	+				+0.6
3,867,878	+				+0.3
3,867,878	+				+0.4
3,867,878	+				+0.7
3,867,878	+				+0.1
3,867,878	+				-0.8
3,867,878	+				+0.4
3,867,878	+				+0.1
3,867,878	+				-1.1
3,867,878	+				+0.8
3,867,879	-				-1.8
3,867,879	-				+0.5
3,867,879	-				-0.0
3,867,879	-				+0.6
3,867,879	-				-0.2
3,867,879	-				+0.2
3,867,879	-				-0.4
3,867,879	-				-0.2
3,867,879	-				+0.2
3,867,879	-				-0.6
3,867,879	-				+1.1
3,867,879	-				+0.8
3,867,879	-				+1.0
3,867,879	-				-0.3
3,867,879	-				+0.7
3,867,879	-				+0.3
3,867,880	+				-0.0
3,867,912	+				+1.0
3,867,912	+				+1.0
3,867,912	+				+0.2
3,867,913	-				-0.7
3,867,913	-				+0.8
3,867,969	+				-0.8
3,867,969	+				+0.0
3,867,969	+				+0.4
3,867,975	+				+0.4
3,867,975	+				+1.0
3,867,975	+				+1.0
3,867,975	+				-0.2
3,867,975	+				+2.0
3,867,975	+				-1.2
3,867,976	-				-0.6
3,867,976	-				+1.2
3,867,976	-				+0.3
3,867,976	-				-0.3
3,867,976	-				-0.6
3,868,027	+				-0.6
3,868,028	-				+0.2
3,868,097	+				+0.1
3,868,097	+				-1.0
3,868,097	+				-0.7
3,868,098	-				-0.8
3,868,098	-				-1.6
3,868,103	+				+0.4
3,868,103	+				+0.1
3,868,103	+				-0.6
3,868,103	+				+0.8
3,868,103	+				+1.2
3,868,104	-				+0.2
3,868,104	-				+0.6
3,868,104	-				-2.0
3,868,108	+				-0.5
3,868,108	+				+2.5
3,868,109	-				+0.4
3,868,182	+				+0.4
3,868,183	-				+1.0
3,868,286	+				-0.6
3,868,381	+		AO353_17535	0.23	+0.5
3,868,455	+		AO353_17535	0.34	+1.7
3,868,456	-		AO353_17535	0.34	-0.4
3,868,456	-		AO353_17535	0.34	-0.2
3,868,456	-		AO353_17535	0.34	-0.1
3,868,456	-		AO353_17535	0.34	+1.6
3,868,456	-		AO353_17535	0.34	+0.4
3,868,456	-		AO353_17535	0.34	-0.5
3,868,482	+		AO353_17535	0.38	+0.2
3,868,483	-		AO353_17535	0.38	-0.8
3,868,483	-		AO353_17535	0.38	+0.7
3,868,515	+		AO353_17535	0.43	+1.2
3,868,515	+		AO353_17535	0.43	-0.8
3,868,515	+		AO353_17535	0.43	+0.7
3,868,515	+		AO353_17535	0.43	-0.7
3,868,515	+		AO353_17535	0.43	+0.3
3,868,515	+		AO353_17535	0.43	+0.4
3,868,515	+		AO353_17535	0.43	+1.3
3,868,516	-		AO353_17535	0.43	+1.1
3,868,516	-		AO353_17535	0.43	+0.2
3,868,516	-		AO353_17535	0.43	-0.6
3,868,516	-		AO353_17535	0.43	+0.7
3,868,516	-		AO353_17535	0.43	-0.6
3,868,516	-		AO353_17535	0.43	-0.5
3,868,516	-		AO353_17535	0.43	-0.1
3,868,516	-		AO353_17535	0.43	+0.9
3,868,516	-		AO353_17535	0.43	-0.0
3,868,516	-		AO353_17535	0.43	+1.4
3,868,518	+		AO353_17535	0.43	+0.7
3,868,518	+		AO353_17535	0.43	+0.5
3,868,518	+		AO353_17535	0.43	+0.4
3,868,518	+		AO353_17535	0.43	-1.0
3,868,518	+		AO353_17535	0.43	+1.8
3,868,518	+		AO353_17535	0.43	+1.5
3,868,518	+		AO353_17535	0.43	+0.8
3,868,519	-		AO353_17535	0.43	-0.3
3,868,519	-		AO353_17535	0.43	-0.2
3,868,729	-		AO353_17535	0.73	+0.7
3,868,729	-		AO353_17535	0.73	+0.7
3,868,729	-		AO353_17535	0.73	+0.1
3,868,946	+				+1.4
3,868,946	+				+0.3
3,868,947	-				-0.6
3,868,951	+				-0.6
3,868,951	+				+0.7
3,868,952	-				-0.7
3,868,952	-				-1.3
3,868,952	-				+0.5
3,868,952	-				+0.3
3,868,953	+				-1.1
3,868,953	+				-0.0
3,868,954	-				-0.0
3,868,954	-				+0.8
3,869,065	+		AO353_17540	0.56	-0.5
3,869,066	-		AO353_17540	0.56	-0.3
3,869,066	-		AO353_17540	0.56	-0.6
3,869,066	-		AO353_17540	0.56	+0.7
3,869,066	-		AO353_17540	0.56	-1.8
3,869,066	-		AO353_17540	0.56	-0.5
3,869,150	+				+0.7
3,869,150	+				-1.0
3,869,150	+				+0.8
3,869,150	+				+0.8
3,869,151	-				+1.2
3,869,151	-				+0.3
3,869,151	-				-0.3
3,869,151	-				+0.3
3,869,151	-				-0.2
3,869,213	+				+1.1
3,869,213	+				-0.2
3,869,213	+				+1.4
3,869,213	+				+0.4
3,869,213	+				-0.1
3,869,213	+				+0.2
3,869,213	+				+0.8
3,869,213	+				-0.2
3,869,214	-				-0.2
3,869,314	+				-0.5
3,869,314	+				-0.2
3,869,314	+				+0.1
3,869,314	+				-0.9
3,869,315	-				-0.1
3,869,315	-				-0.0
3,869,399	+				+0.7
3,869,399	+				+0.6
3,869,399	+				-1.2
3,869,399	+				+1.3
3,869,399	+				-0.6
3,869,400	-				+1.6
3,869,400	-				+0.0
3,869,453	+		AO353_17545	0.23	-0.0
3,869,453	+		AO353_17545	0.23	+0.7
3,869,456	+		AO353_17545	0.24	-0.7
3,869,456	+		AO353_17545	0.24	+0.3
3,869,471	+		AO353_17545	0.30	-0.7
3,869,475	-		AO353_17545	0.31	-0.2
3,869,489	+		AO353_17545	0.37	+1.9
3,869,489	+		AO353_17545	0.37	-0.1
3,869,489	+		AO353_17545	0.37	+0.2
3,869,489	+		AO353_17545	0.37	-1.2
3,869,489	+		AO353_17545	0.37	-0.3
3,869,490	-		AO353_17545	0.37	-0.3
3,869,490	-		AO353_17545	0.37	+0.8
3,869,508	-		AO353_17545	0.44	-0.1
3,869,508	-		AO353_17545	0.44	-0.1
3,869,508	-		AO353_17545	0.44	+0.1
3,869,508	-		AO353_17545	0.44	+1.8
3,869,508	-		AO353_17545	0.44	-0.3
3,869,508	-		AO353_17545	0.44	+0.7
3,869,508	-		AO353_17545	0.44	-1.3
3,869,508	-		AO353_17545	0.44	-0.0
3,869,508	-		AO353_17545	0.44	+0.2
3,869,511	-		AO353_17545	0.46	+0.1
3,869,511	-		AO353_17545	0.46	-0.3
3,869,514	-		AO353_17545	0.47	+0.1
3,869,522	+		AO353_17545	0.50	+0.4
3,869,523	-		AO353_17545	0.50	+0.2
3,869,525	+		AO353_17545	0.51	-0.5
3,869,525	+		AO353_17545	0.51	-0.4
3,869,525	+		AO353_17545	0.51	-0.9
3,869,525	+		AO353_17545	0.51	-0.5
3,869,526	-		AO353_17545	0.52	+0.1
3,869,526	-		AO353_17545	0.52	+0.4
3,869,526	-		AO353_17545	0.52	-1.9
3,869,526	-		AO353_17545	0.52	-0.1
3,869,528	+		AO353_17545	0.52	-0.5
3,869,528	+		AO353_17545	0.52	-0.1
3,869,529	-		AO353_17545	0.53	+0.5
3,869,529	-		AO353_17545	0.53	+0.8
3,869,529	-		AO353_17545	0.53	-0.0
3,869,529	-		AO353_17545	0.53	-0.2
3,869,537	+		AO353_17545	0.56	-0.4
3,869,537	+		AO353_17545	0.56	-0.3
3,869,537	+		AO353_17545	0.56	+0.2
3,869,537	+		AO353_17545	0.56	-0.4
3,869,537	+		AO353_17545	0.56	+0.5
3,869,538	-		AO353_17545	0.56	-1.2
3,869,538	-		AO353_17545	0.56	-0.2
3,869,538	-		AO353_17545	0.56	-0.2
3,869,538	-		AO353_17545	0.56	-0.1
3,869,538	-		AO353_17545	0.56	+0.1
3,869,538	-		AO353_17545	0.56	+1.3
3,869,538	-		AO353_17545	0.56	+0.7
3,869,540	+		AO353_17545	0.57	-0.6
3,869,540	+		AO353_17545	0.57	-0.0
3,869,540	+		AO353_17545	0.57	+0.3
3,869,540	+		AO353_17545	0.57	+1.2
3,869,540	+		AO353_17545	0.57	+0.2
3,869,540	+		AO353_17545	0.57	-1.9
3,869,540	+		AO353_17545	0.57	-0.2
3,869,540	+		AO353_17545	0.57	+0.2
3,869,540	+		AO353_17545	0.57	-0.9
3,869,541	-		AO353_17545	0.58	+0.7
3,869,541	-		AO353_17545	0.58	+2.0
3,869,541	-		AO353_17545	0.58	+0.1
3,869,541	-		AO353_17545	0.58	+0.6
3,869,541	-		AO353_17545	0.58	-0.3
3,869,541	-		AO353_17545	0.58	-0.5
3,869,541	-		AO353_17545	0.58	-1.8
3,869,541	-		AO353_17545	0.58	+0.0
3,869,541	-		AO353_17545	0.58	+0.5
3,869,541	-		AO353_17545	0.58	+0.3
3,869,541	-		AO353_17545	0.58	+0.1
3,869,541	-		AO353_17545	0.58	-0.2
3,869,541	-		AO353_17545	0.58	+1.2
3,869,541	-		AO353_17545	0.58	+0.4
3,869,541	-		AO353_17545	0.58	+2.0
3,869,543	+		AO353_17545	0.58	+1.4
3,869,543	+		AO353_17545	0.58	+0.3
3,869,543	+		AO353_17545	0.58	-2.3
3,869,543	+		AO353_17545	0.58	-0.3
3,869,543	+		AO353_17545	0.58	-0.3
3,869,544	-		AO353_17545	0.59	-1.5
3,869,552	+		AO353_17545	0.62	+0.7
3,869,553	-		AO353_17545	0.62	-0.3
3,869,555	+		AO353_17545	0.63	+0.1
3,869,555	+		AO353_17545	0.63	-2.8
3,869,555	+		AO353_17545	0.63	+0.4
3,869,555	+		AO353_17545	0.63	-1.4
3,869,555	+		AO353_17545	0.63	+1.1
3,869,555	+		AO353_17545	0.63	+0.6
3,869,555	+		AO353_17545	0.63	+1.7
3,869,555	+		AO353_17545	0.63	+1.1
3,869,555	+		AO353_17545	0.63	+0.7
3,869,555	+		AO353_17545	0.63	+1.0
3,869,555	+		AO353_17545	0.63	+0.1
3,869,556	-		AO353_17545	0.63	+0.2
3,869,556	-		AO353_17545	0.63	+0.0
3,869,556	-		AO353_17545	0.63	-0.6
3,869,556	-		AO353_17545	0.63	-0.3
3,869,556	-		AO353_17545	0.63	-0.8
3,869,556	-		AO353_17545	0.63	+0.3
3,869,556	-		AO353_17545	0.63	-0.7
3,869,556	-		AO353_17545	0.63	-1.0
3,869,556	-		AO353_17545	0.63	-0.1
3,869,556	-		AO353_17545	0.63	-0.1
3,869,558	+		AO353_17545	0.64	+0.1
3,869,558	+		AO353_17545	0.64	+0.8
3,869,558	+		AO353_17545	0.64	-0.0
3,869,558	+		AO353_17545	0.64	-0.1
3,869,559	-				-0.0
3,869,591	+		AO353_17545	0.77	-0.7
3,869,591	+		AO353_17545	0.77	-1.3
3,869,592	-		AO353_17545	0.78	-0.2
3,869,592	-		AO353_17545	0.78	-0.5
3,869,592	-		AO353_17545	0.78	-0.0
3,869,594	+		AO353_17545	0.79	-0.8
3,869,594	+		AO353_17545	0.79	-0.1
3,869,594	+		AO353_17545	0.79	+1.9
3,869,594	+		AO353_17545	0.79	-0.6
3,869,595	-		AO353_17545	0.79	+0.4
3,869,595	-		AO353_17545	0.79	-0.4
3,869,655	+				-0.0
3,869,655	+				+0.0
3,869,656	-				+0.5
3,869,767	-				+0.5
3,869,774	+				-0.9
3,869,774	+				-0.5
3,869,775	-				-0.2
3,869,776	+				+1.0
3,869,776	+				-0.2
3,869,776	+				+0.3
3,869,777	-				+0.9
3,869,777	-				-0.8
3,869,787	-				+0.4
3,869,866	+				-1.9
3,869,866	+				-0.9
3,869,867	-				-0.0
3,869,899	+				+1.0
3,869,899	+				+0.4
3,869,899	+				-0.2
3,869,899	+				+0.1
3,869,899	+				-0.7
3,869,900	-				-0.3
3,869,900	-				+0.3
3,869,900	-				+0.6
3,869,900	-				+0.4
3,869,900	-				-0.3
3,869,900	-				-0.7
3,869,900	-				+1.0
3,869,900	-				+0.1