Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16090

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,560,375	+		AO353_16085	0.32	-0.8
3,560,375	+		AO353_16085	0.32	+1.3
3,560,375	+		AO353_16085	0.32	-0.4
3,560,376	-		AO353_16085	0.32	-0.7
3,560,376	-		AO353_16085	0.32	+0.6
3,560,420	+		AO353_16085	0.35	-0.1
3,560,421	-		AO353_16085	0.35	-0.1
3,560,421	-		AO353_16085	0.35	-0.7
3,560,421	-		AO353_16085	0.35	-0.5
3,560,421	-		AO353_16085	0.35	+0.6
3,560,421	-		AO353_16085	0.35	-0.7
3,560,421	-		AO353_16085	0.35	-0.0
3,560,434	+		AO353_16085	0.36	-0.2
3,560,487	+		AO353_16085	0.40	-0.4
3,560,487	+		AO353_16085	0.40	-0.8
3,560,488	-		AO353_16085	0.40	+1.1
3,560,501	+		AO353_16085	0.41	+0.6
3,560,501	+		AO353_16085	0.41	+0.3
3,560,501	+		AO353_16085	0.41	+0.4
3,560,501	+		AO353_16085	0.41	+0.5
3,560,501	+		AO353_16085	0.41	-1.1
3,560,501	+		AO353_16085	0.41	+0.6
3,560,501	+		AO353_16085	0.41	-0.2
3,560,501	+		AO353_16085	0.41	-1.0
3,560,501	+		AO353_16085	0.41	+1.0
3,560,501	+		AO353_16085	0.41	-0.0
3,560,501	+		AO353_16085	0.41	+0.3
3,560,501	+		AO353_16085	0.41	+0.1
3,560,501	+		AO353_16085	0.41	-0.2
3,560,501	+		AO353_16085	0.41	+0.2
3,560,501	+		AO353_16085	0.41	-1.8
3,560,501	+		AO353_16085	0.41	+0.9
3,560,501	+		AO353_16085	0.41	+0.3
3,560,502	-		AO353_16085	0.42	+0.2
3,560,502	-		AO353_16085	0.42	+0.6
3,560,502	-		AO353_16085	0.42	-0.2
3,560,502	-		AO353_16085	0.42	+1.4
3,560,502	-		AO353_16085	0.42	+0.3
3,560,502	-		AO353_16085	0.42	-0.4
3,560,502	-		AO353_16085	0.42	+0.0
3,560,502	-		AO353_16085	0.42	+1.1
3,560,502	-		AO353_16085	0.42	+1.6
3,560,504	+		AO353_16085	0.42	+0.0
3,560,504	+		AO353_16085	0.42	+0.8
3,560,505	-		AO353_16085	0.42	+0.8
3,560,505	-		AO353_16085	0.42	-0.4
3,560,569	+		AO353_16085	0.47	+0.4
3,560,570	-		AO353_16085	0.47	+0.1
3,560,611	+		AO353_16085	0.50	+0.1
3,560,611	+		AO353_16085	0.50	+0.7
3,560,612	-		AO353_16085	0.50	+1.2
3,560,612	-		AO353_16085	0.50	-2.0
3,560,612	-		AO353_16085	0.50	+1.8
3,560,612	-		AO353_16085	0.50	+0.0
3,560,612	-		AO353_16085	0.50	+0.6
3,560,612	-		AO353_16085	0.50	+1.6
3,560,612	-		AO353_16085	0.50	-0.7
3,560,615	+		AO353_16085	0.50	-1.7
3,560,615	+		AO353_16085	0.50	+0.9
3,560,615	+		AO353_16085	0.50	+0.6
3,560,615	+		AO353_16085	0.50	+0.6
3,560,615	+		AO353_16085	0.50	-0.7
3,560,615	+		AO353_16085	0.50	-0.7
3,560,615	+		AO353_16085	0.50	+0.9
3,560,616	-		AO353_16085	0.51	+0.1
3,560,616	-		AO353_16085	0.51	-1.0
3,560,616	-		AO353_16085	0.51	-0.3
3,560,616	-		AO353_16085	0.51	-0.8
3,560,616	-		AO353_16085	0.51	+0.4
3,560,661	-		AO353_16085	0.54	+0.6
3,560,740	+		AO353_16085	0.60	+0.1
3,560,740	+		AO353_16085	0.60	+0.1
3,560,741	-		AO353_16085	0.60	-0.6
3,560,741	-		AO353_16085	0.60	-0.0
3,560,741	-		AO353_16085	0.60	+0.3
3,560,741	-		AO353_16085	0.60	+1.1
3,560,741	-		AO353_16085	0.60	-0.2
3,560,741	-		AO353_16085	0.60	-0.2
3,560,896	+		AO353_16085	0.73	-0.1
3,560,896	+		AO353_16085	0.73	-0.7
3,560,896	+		AO353_16085	0.73	-0.2
3,560,896	+		AO353_16085	0.73	-1.9
3,560,896	+		AO353_16085	0.73	+0.3
3,560,897	-		AO353_16085	0.73	-0.7
3,560,897	-		AO353_16085	0.73	+0.4
3,560,897	-		AO353_16085	0.73	-1.0
3,560,897	-		AO353_16085	0.73	+0.8
3,560,897	-		AO353_16085	0.73	+0.8
3,560,939	+		AO353_16085	0.76	+0.6
3,560,939	+		AO353_16085	0.76	+0.1
3,560,940	-		AO353_16085	0.76	+0.6
3,561,069	+		AO353_16085	0.86	+0.5
3,561,069	+		AO353_16085	0.86	+1.1
3,561,069	+		AO353_16085	0.86	-0.1
3,561,069	+		AO353_16085	0.86	+0.1
3,561,070	-		AO353_16085	0.86	-1.2
3,561,070	-		AO353_16085	0.86	-0.4
3,561,070	-		AO353_16085	0.86	-1.7
3,561,070	-		AO353_16085	0.86	-0.5
3,561,085	+		AO353_16085	0.88	-2.4
3,561,085	+		AO353_16085	0.88	+0.9
3,561,085	+		AO353_16085	0.88	+0.0
3,561,085	+		AO353_16085	0.88	+0.9
3,561,085	+		AO353_16085	0.88	-0.2
3,561,085	+		AO353_16085	0.88	-1.3
3,561,085	+		AO353_16085	0.88	+0.7
3,561,086	-		AO353_16085	0.88	+0.4
3,561,086	-		AO353_16085	0.88	+0.4
3,561,086	-		AO353_16085	0.88	-0.4
3,561,088	+		AO353_16085	0.88	+1.1
3,561,089	-		AO353_16085	0.88	+1.2
3,561,113	+		AO353_16085	0.90	-1.2
3,561,114	-		AO353_16085	0.90	-0.1
3,561,114	-		AO353_16085	0.90	+0.6
3,561,125	-				+0.7
3,561,125	-				-0.3
3,561,220	+				+1.3
3,561,220	+				-1.0
3,561,221	-				+0.3
3,561,239	+				-0.6
3,561,239	+				+0.8
3,561,240	-				-0.9
3,561,240	-				+0.2
3,561,240	-				+0.1
3,561,304	+				-1.4
3,561,304	+				+0.1
3,561,305	-				-0.3
3,561,305	-				-0.8
3,561,305	-				+0.4
3,561,305	-				+0.6
3,561,305	-				+1.2
3,561,319	+				+1.9
3,561,320	-				+0.1
3,561,320	-				+1.7
3,561,369	+		AO353_16090	0.11	-0.0
3,561,369	+		AO353_16090	0.11	-0.0
3,561,369	+		AO353_16090	0.11	-0.4
3,561,369	+		AO353_16090	0.11	-0.5
3,561,369	+		AO353_16090	0.11	+1.1
3,561,369	+		AO353_16090	0.11	+0.4
3,561,369	+		AO353_16090	0.11	+0.1
3,561,369	+		AO353_16090	0.11	+0.5
3,561,369	+		AO353_16090	0.11	-0.5
3,561,369	+		AO353_16090	0.11	+0.6
3,561,369	+		AO353_16090	0.11	-0.3
3,561,369	+		AO353_16090	0.11	-0.0
3,561,369	+				-1.4
3,561,369	+		AO353_16090	0.11	+0.4
3,561,369	+		AO353_16090	0.11	+0.0
3,561,369	+		AO353_16090	0.11	+0.6
3,561,369	+		AO353_16090	0.11	+0.6
3,561,369	+		AO353_16090	0.11	-1.0
3,561,369	+		AO353_16090	0.11	-0.0
3,561,369	+		AO353_16090	0.11	+1.7
3,561,369	+		AO353_16090	0.11	+0.4
3,561,370	-		AO353_16090	0.11	+1.4
3,561,370	-		AO353_16090	0.11	+0.3
3,561,370	-		AO353_16090	0.11	+0.0
3,561,370	-		AO353_16090	0.11	-1.0
3,561,370	-		AO353_16090	0.11	-0.2
3,561,370	-		AO353_16090	0.11	-0.2
3,561,370	-		AO353_16090	0.11	-0.2
3,561,370	-		AO353_16090	0.11	+1.1
3,561,370	-		AO353_16090	0.11	-0.3
3,561,370	-		AO353_16090	0.11	-1.2
3,561,370	-		AO353_16090	0.11	-0.3
3,561,370	-		AO353_16090	0.11	-0.7
3,561,370	-		AO353_16090	0.11	-0.4
3,561,370	-		AO353_16090	0.11	-0.3
3,561,370	-		AO353_16090	0.11	+0.7
3,561,370	-		AO353_16090	0.11	+0.6
3,561,370	-		AO353_16090	0.11	-0.1
3,561,370	-		AO353_16090	0.11	+0.1
3,561,370	-		AO353_16090	0.11	+0.3
3,561,370	-		AO353_16090	0.11	+0.7
3,561,375	+		AO353_16090	0.12	+0.3
3,561,375	+		AO353_16090	0.12	-1.2
3,561,375	+		AO353_16090	0.12	-0.1
3,561,375	+		AO353_16090	0.12	-0.2
3,561,375	+		AO353_16090	0.12	-0.0
3,561,375	+		AO353_16090	0.12	-1.2
3,561,375	+		AO353_16090	0.12	+0.2
3,561,376	-		AO353_16090	0.12	+0.3
3,561,376	-		AO353_16090	0.12	-1.0
3,561,395	+		AO353_16090	0.15	-0.5
3,561,395	+		AO353_16090	0.15	+1.0
3,561,395	+		AO353_16090	0.15	-1.1
3,561,395	+		AO353_16090	0.15	-0.6
3,561,395	+		AO353_16090	0.15	+0.3
3,561,396	-		AO353_16090	0.15	-0.8
3,561,396	-		AO353_16090	0.15	+0.5
3,561,396	-		AO353_16090	0.15	-1.3
3,561,396	-		AO353_16090	0.15	+0.9
3,561,396	-		AO353_16090	0.15	+1.8
3,561,396	-		AO353_16090	0.15	-0.2
3,561,399	+		AO353_16090	0.15	+0.9
3,561,399	+		AO353_16090	0.15	+0.3
3,561,399	+		AO353_16090	0.15	+1.0
3,561,399	+		AO353_16090	0.15	+0.6
3,561,400	-		AO353_16090	0.16	+0.3
3,561,400	-		AO353_16090	0.16	-1.0
3,561,400	-		AO353_16090	0.16	+0.1
3,561,400	-		AO353_16090	0.16	-0.4
3,561,400	-		AO353_16090	0.16	+0.6
3,561,400	-		AO353_16090	0.16	+0.1
3,561,400	-		AO353_16090	0.16	+1.8
3,561,400	-		AO353_16090	0.16	-0.3
3,561,453	-		AO353_16090	0.23	+0.3
3,561,453	-		AO353_16090	0.23	+0.6
3,561,453	-		AO353_16090	0.23	-0.4
3,561,464	+		AO353_16090	0.24	+2.7
3,561,464	+		AO353_16090	0.24	+1.1
3,561,468	+		AO353_16090	0.25	+0.2
3,561,469	-		AO353_16090	0.25	+0.7
3,561,600	+		AO353_16090	0.43	-0.4
3,561,600	+		AO353_16090	0.43	+0.0
3,561,600	+		AO353_16090	0.43	-0.4
3,561,600	+		AO353_16090	0.43	-0.7
3,561,600	+		AO353_16090	0.43	+0.5
3,561,600	+		AO353_16090	0.43	+0.9
3,561,600	+		AO353_16090	0.43	+0.4
3,561,600	+				+1.6
3,561,600	+		AO353_16090	0.43	+1.1
3,561,600	+		AO353_16090	0.43	+1.2
3,561,600	+		AO353_16090	0.43	+1.1
3,561,600	+		AO353_16090	0.43	-0.4
3,561,600	+		AO353_16090	0.43	-0.9
3,561,600	+		AO353_16090	0.43	+0.5
3,561,600	+		AO353_16090	0.43	+1.5
3,561,601	-		AO353_16090	0.43	+1.1
3,561,601	-		AO353_16090	0.43	+0.8
3,561,601	-		AO353_16090	0.43	-0.1
3,561,601	-		AO353_16090	0.43	+1.2
3,561,601	-		AO353_16090	0.43	+0.7
3,561,601	-		AO353_16090	0.43	-1.4
3,561,601	-		AO353_16090	0.43	+0.8
3,561,601	-		AO353_16090	0.43	+0.0
3,561,601	-		AO353_16090	0.43	-0.4
3,561,601	-		AO353_16090	0.43	+0.0
3,561,601	-		AO353_16090	0.43	-0.7
3,561,601	-		AO353_16090	0.43	+0.7
3,561,601	-		AO353_16090	0.43	+0.1
3,561,601	-		AO353_16090	0.43	-1.0
3,561,601	-		AO353_16090	0.43	+1.5
3,561,601	-		AO353_16090	0.43	+0.3
3,561,601	-				+3.1
3,561,601	-				+0.0
3,561,601	-		AO353_16090	0.43	+1.5
3,561,601	-		AO353_16090	0.43	+0.5
3,561,603	-		AO353_16090	0.43	-1.0
3,561,627	+		AO353_16090	0.46	+1.3
3,561,705	+		AO353_16090	0.57	-0.0
3,561,757	+		AO353_16090	0.64	+0.1
3,561,820	-		AO353_16090	0.72	+1.3
3,562,153	+		AO353_16095	0.25	-0.0
3,562,153	+		AO353_16095	0.25	+0.1
3,562,153	+		AO353_16095	0.25	+1.4
3,562,153	+		AO353_16095	0.25	-0.2
3,562,153	+		AO353_16095	0.25	-1.3
3,562,153	+		AO353_16095	0.25	+1.1
3,562,153	+		AO353_16095	0.25	-0.5
3,562,153	+		AO353_16095	0.25	-0.7
3,562,153	+		AO353_16095	0.25	+0.6
3,562,153	+		AO353_16095	0.25	-0.5
3,562,153	+		AO353_16095	0.25	-0.5
3,562,153	+		AO353_16095	0.25	-1.0
3,562,153	+		AO353_16095	0.25	-0.6
3,562,153	+		AO353_16095	0.25	-0.1
3,562,153	+		AO353_16095	0.25	-0.1
3,562,154	-		AO353_16095	0.25	-0.2
3,562,154	-		AO353_16095	0.25	-0.9
3,562,154	-		AO353_16095	0.25	-1.0
3,562,154	-		AO353_16095	0.25	+0.0
3,562,243	+		AO353_16095	0.43	-0.9
3,562,243	+		AO353_16095	0.43	+1.3
3,562,244	-		AO353_16095	0.43	-0.4
3,562,244	-		AO353_16095	0.43	-0.4
3,562,244	-		AO353_16095	0.43	-1.4
3,562,244	-		AO353_16095	0.43	+0.4
3,562,300	+		AO353_16095	0.54	-0.0
3,562,301	-		AO353_16095	0.54	+0.9
3,562,332	+		AO353_16095	0.60	+0.3
3,562,332	+		AO353_16095	0.60	-0.6
3,562,332	+		AO353_16095	0.60	+1.0
3,562,333	-		AO353_16095	0.60	+1.4
3,562,333	-		AO353_16095	0.60	-0.2
3,562,333	-		AO353_16095	0.60	+1.1
3,562,333	-		AO353_16095	0.60	+0.6
3,562,333	-		AO353_16095	0.60	+0.0
3,562,337	+		AO353_16095	0.61	-1.2
3,562,338	-		AO353_16095	0.61	-1.4
3,562,338	-		AO353_16095	0.61	-0.2
3,562,338	-		AO353_16095	0.61	+0.7
3,562,338	-		AO353_16095	0.61	+0.6
3,562,425	-		AO353_16095	0.79	+0.0
3,562,437	-		AO353_16095	0.81	+0.6
3,562,437	-		AO353_16095	0.81	-1.4
3,562,437	-		AO353_16095	0.81	-0.1
3,562,465	+		AO353_16095	0.87	-0.9
3,562,465	+		AO353_16095	0.87	+0.3
3,562,480	+		AO353_16095	0.90	-0.6
3,562,481	-				+0.6
3,562,481	-				+0.0
3,562,481	-				-1.2
3,562,481	-				+0.7
3,562,586	+				-2.0
3,562,586	+				+1.5
3,562,586	+				-1.9
3,562,587	-				-0.6
3,562,607	+				-0.8
3,562,608	-				+1.1
3,562,608	-				-0.3
3,562,608	-				+0.1
3,562,611	+				+0.0
3,562,611	+				-0.7
3,562,611	+				+0.6
3,562,611	+				+1.5
3,562,611	+				+0.1
3,562,611	+				+0.1
3,562,611	+				+0.6
3,562,611	+				-0.0
3,562,611	+				+0.2
3,562,611	+				-0.4
3,562,611	+				+0.8
3,562,611	+				-0.3
3,562,611	+				-0.1
3,562,611	+				-0.8
3,562,611	+				+0.4
3,562,611	+				+0.3
3,562,612	-				-0.4
3,562,612	-				-1.0
3,562,612	-				+0.2
3,562,612	-				-0.7
3,562,612	-				-0.1
3,562,612	-				+0.7
3,562,612	-				+0.8
3,562,612	-				+0.6
3,562,612	-				+0.9
3,562,612	-				-0.8
3,562,612	-				+0.3
3,562,612	-				-0.7
3,562,612	-				+0.1
3,562,612	-				+1.5
3,562,612	-				-1.6
3,562,612	-				-1.0
3,562,612	-				+0.4
3,562,612	-				-0.6
3,562,612	-				+0.4
3,562,669	+				-1.0
3,562,669	+				-0.2
3,562,669	+				+0.9
3,562,669	+				-1.9
3,562,670	-				+0.8
3,562,670	-				-0.5
3,562,670	-				+0.8
3,562,670	-				+1.0
3,562,670	-				+0.7
3,562,670	-				-0.2
3,562,670	-				-0.1
3,562,670	-				-0.0
3,562,672	+				-0.9
3,562,672	+				-0.4
3,562,672	+				-0.5
3,562,672	+				+0.2
3,562,672	+				+1.6
3,562,672	+				-0.3
3,562,673	-				+0.1
3,562,673	-				+1.1
3,562,673	-				+0.3
3,562,673	-				+0.7
3,562,673	-				-1.1
3,562,673	-				-0.2
3,562,673	-				-0.6
3,562,726	+				+1.3
3,562,726	+				-0.6
3,562,727	-				+0.0
3,562,727	-				-0.6
3,562,733	+				-0.5
3,562,734	-				+0.6
3,562,857	+		AO353_16100	0.16	+0.1
3,563,021	+		AO353_16100	0.29	+0.4