Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10120 and AO353_10125 are separated by 86 nucleotides AO353_10125 and AO353_10130 overlap by 4 nucleotides AO353_10130 and AO353_10135 overlap by 1 nucleotides AO353_10135 and AO353_10140 are separated by 11 nucleotides
AO353_10120: AO353_10120 - N-acetylmuramoyl-L-alanine amidase, at 2,214,984 to 2,216,195
_10120
AO353_10125: AO353_10125 - GTP cyclohydrolase, at 2,216,282 to 2,217,178
_10125
AO353_10130: AO353_10130 - manganese ABC transporter ATP-binding protein, at 2,217,175 to 2,217,843
_10130
AO353_10135: AO353_10135 - zinc ABC transporter permease, at 2,217,843 to 2,218,709
_10135
AO353_10140: AO353_10140 - metal ABC transporter substrate-binding protein, at 2,218,721 to 2,219,605
_10140
Position (kb)
2217
2218 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2216.195 kb on + strand at 2216.195 kb on + strand at 2216.196 kb on - strand at 2216.221 kb on + strand at 2216.222 kb on - strand at 2216.222 kb on - strand at 2216.222 kb on - strand at 2216.259 kb on + strand at 2216.379 kb on + strand, within AO353_10125 at 2216.379 kb on + strand, within AO353_10125 at 2216.379 kb on + strand, within AO353_10125 at 2216.379 kb on + strand, within AO353_10125 at 2216.379 kb on + strand, within AO353_10125 at 2216.380 kb on - strand, within AO353_10125 at 2216.380 kb on - strand, within AO353_10125 at 2216.380 kb on - strand, within AO353_10125 at 2216.397 kb on + strand, within AO353_10125 at 2216.455 kb on + strand, within AO353_10125 at 2216.455 kb on + strand, within AO353_10125 at 2216.455 kb on + strand, within AO353_10125 at 2216.455 kb on + strand, within AO353_10125 at 2216.455 kb on + strand, within AO353_10125 at 2216.455 kb on + strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.456 kb on - strand, within AO353_10125 at 2216.468 kb on + strand, within AO353_10125 at 2216.468 kb on + strand, within AO353_10125 at 2216.468 kb on + strand, within AO353_10125 at 2216.468 kb on + strand, within AO353_10125 at 2216.468 kb on + strand, within AO353_10125 at 2216.469 kb on - strand, within AO353_10125 at 2216.469 kb on - strand, within AO353_10125 at 2216.469 kb on - strand, within AO353_10125 at 2216.469 kb on - strand, within AO353_10125 at 2216.573 kb on + strand, within AO353_10125 at 2216.573 kb on + strand, within AO353_10125 at 2216.573 kb on + strand, within AO353_10125 at 2216.574 kb on - strand, within AO353_10125 at 2216.574 kb on - strand, within AO353_10125 at 2216.574 kb on - strand, within AO353_10125 at 2216.574 kb on - strand, within AO353_10125 at 2216.595 kb on + strand, within AO353_10125 at 2216.595 kb on + strand, within AO353_10125 at 2216.595 kb on + strand, within AO353_10125 at 2216.595 kb on + strand, within AO353_10125 at 2216.596 kb on - strand, within AO353_10125 at 2216.596 kb on - strand at 2216.596 kb on - strand, within AO353_10125 at 2216.596 kb on - strand, within AO353_10125 at 2216.596 kb on - strand, within AO353_10125 at 2216.596 kb on - strand, within AO353_10125 at 2216.714 kb on + strand, within AO353_10125 at 2216.714 kb on + strand, within AO353_10125 at 2216.714 kb on + strand, within AO353_10125 at 2216.715 kb on - strand, within AO353_10125 at 2216.715 kb on - strand, within AO353_10125 at 2216.715 kb on - strand, within AO353_10125 at 2216.715 kb on - strand, within AO353_10125 at 2216.715 kb on - strand, within AO353_10125 at 2216.715 kb on - strand, within AO353_10125 at 2216.758 kb on + strand, within AO353_10125 at 2216.758 kb on + strand, within AO353_10125 at 2216.758 kb on + strand, within AO353_10125 at 2216.758 kb on + strand, within AO353_10125 at 2216.758 kb on + strand, within AO353_10125 at 2216.758 kb on + strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.759 kb on - strand, within AO353_10125 at 2216.903 kb on + strand, within AO353_10125 at 2216.903 kb on + strand, within AO353_10125 at 2216.903 kb on + strand, within AO353_10125 at 2216.903 kb on + strand, within AO353_10125 at 2216.903 kb on + strand, within AO353_10125 at 2216.903 kb on + strand, within AO353_10125 at 2216.903 kb on + strand, within AO353_10125 at 2216.904 kb on - strand, within AO353_10125 at 2216.904 kb on - strand, within AO353_10125 at 2216.904 kb on - strand, within AO353_10125 at 2216.904 kb on - strand, within AO353_10125 at 2216.904 kb on - strand, within AO353_10125 at 2216.904 kb on - strand, within AO353_10125 at 2216.979 kb on + strand, within AO353_10125 at 2216.979 kb on + strand, within AO353_10125 at 2216.980 kb on - strand, within AO353_10125 at 2217.245 kb on + strand, within AO353_10130 at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.828 kb on + strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.829 kb on - strand at 2217.841 kb on + strand at 2217.841 kb on + strand at 2217.841 kb on + strand at 2217.841 kb on + strand at 2217.904 kb on + strand at 2217.904 kb on + strand at 2217.919 kb on + strand at 2218.158 kb on + strand, within AO353_10135 at 2218.159 kb on - strand, within AO353_10135 at 2218.159 kb on - strand, within AO353_10135 at 2218.320 kb on + strand, within AO353_10135 at 2218.321 kb on - strand, within AO353_10135 at 2218.321 kb on - strand, within AO353_10135 at 2218.587 kb on + strand, within AO353_10135 at 2218.587 kb on + strand, within AO353_10135 at 2218.587 kb on + strand, within AO353_10135 at 2218.587 kb on + strand, within AO353_10135 at 2218.588 kb on - strand, within AO353_10135 at 2218.588 kb on - strand, within AO353_10135 at 2218.588 kb on - strand, within AO353_10135 at 2218.588 kb on - strand, within AO353_10135 at 2218.590 kb on + strand, within AO353_10135 at 2218.590 kb on + strand, within AO353_10135 at 2218.590 kb on + strand, within AO353_10135 at 2218.590 kb on + strand, within AO353_10135 at 2218.590 kb on + strand, within AO353_10135 at 2218.591 kb on - strand, within AO353_10135 at 2218.591 kb on - strand, within AO353_10135 at 2218.591 kb on - strand, within AO353_10135 at 2218.591 kb on - strand, within AO353_10135 at 2218.591 kb on - strand, within AO353_10135 at 2218.625 kb on - strand at 2218.638 kb on + strand at 2218.638 kb on + strand at 2218.638 kb on + strand at 2218.638 kb on + strand at 2218.639 kb on - strand at 2218.639 kb on - strand at 2218.639 kb on - strand at 2218.639 kb on - strand at 2218.639 kb on - strand at 2218.639 kb on - strand at 2218.639 kb on - strand at 2218.731 kb on + strand at 2218.731 kb on + strand at 2218.731 kb on + strand at 2218.731 kb on + strand at 2218.731 kb on + strand at 2218.732 kb on - strand at 2218.732 kb on - strand at 2218.732 kb on - strand at 2218.732 kb on - strand at 2218.732 kb on - strand at 2218.732 kb on - strand at 2218.732 kb on - strand at 2218.732 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 2,216,195 + -0.7 2,216,195 + -1.0 2,216,196 - +1.6 2,216,221 + -0.3 2,216,222 - -0.5 2,216,222 - +0.4 2,216,222 - -0.2 2,216,259 + -0.6 2,216,379 + AO353_10125 0.11 -1.3 2,216,379 + AO353_10125 0.11 +0.2 2,216,379 + AO353_10125 0.11 +0.8 2,216,379 + AO353_10125 0.11 +0.3 2,216,379 + AO353_10125 0.11 +0.5 2,216,380 - AO353_10125 0.11 -0.6 2,216,380 - AO353_10125 0.11 +0.0 2,216,380 - AO353_10125 0.11 +0.3 2,216,397 + AO353_10125 0.13 +0.1 2,216,455 + AO353_10125 0.19 -0.0 2,216,455 + AO353_10125 0.19 -0.8 2,216,455 + AO353_10125 0.19 +0.0 2,216,455 + AO353_10125 0.19 +0.3 2,216,455 + AO353_10125 0.19 +1.4 2,216,455 + AO353_10125 0.19 +0.3 2,216,456 - AO353_10125 0.19 +1.0 2,216,456 - AO353_10125 0.19 -0.1 2,216,456 - AO353_10125 0.19 -0.3 2,216,456 - AO353_10125 0.19 -1.1 2,216,456 - AO353_10125 0.19 +0.2 2,216,456 - AO353_10125 0.19 +0.9 2,216,456 - AO353_10125 0.19 -1.8 2,216,456 - AO353_10125 0.19 -0.6 2,216,456 - AO353_10125 0.19 -0.4 2,216,468 + AO353_10125 0.21 +0.7 2,216,468 + AO353_10125 0.21 -0.2 2,216,468 + AO353_10125 0.21 -0.6 2,216,468 + AO353_10125 0.21 -0.6 2,216,468 + AO353_10125 0.21 +0.9 2,216,469 - AO353_10125 0.21 -0.5 2,216,469 - AO353_10125 0.21 +0.5 2,216,469 - AO353_10125 0.21 -1.7 2,216,469 - AO353_10125 0.21 +0.4 2,216,573 + AO353_10125 0.32 +0.9 2,216,573 + AO353_10125 0.32 -0.0 2,216,573 + AO353_10125 0.32 -1.5 2,216,574 - AO353_10125 0.33 +0.2 2,216,574 - AO353_10125 0.33 -0.6 2,216,574 - AO353_10125 0.33 +1.0 2,216,574 - AO353_10125 0.33 -0.4 2,216,595 + AO353_10125 0.35 +1.1 2,216,595 + AO353_10125 0.35 -0.2 2,216,595 + AO353_10125 0.35 +0.3 2,216,595 + AO353_10125 0.35 -2.3 2,216,596 - AO353_10125 0.35 +1.3 2,216,596 - +1.3 2,216,596 - AO353_10125 0.35 -1.1 2,216,596 - AO353_10125 0.35 -0.5 2,216,596 - AO353_10125 0.35 -0.1 2,216,596 - AO353_10125 0.35 -0.8 2,216,714 + AO353_10125 0.48 -0.9 2,216,714 + AO353_10125 0.48 +0.5 2,216,714 + AO353_10125 0.48 -1.5 2,216,715 - AO353_10125 0.48 -1.3 2,216,715 - AO353_10125 0.48 +0.0 2,216,715 - AO353_10125 0.48 -0.3 2,216,715 - AO353_10125 0.48 +0.6 2,216,715 - AO353_10125 0.48 -0.2 2,216,715 - AO353_10125 0.48 -0.3 2,216,758 + AO353_10125 0.53 +0.8 2,216,758 + AO353_10125 0.53 -0.5 2,216,758 + AO353_10125 0.53 -0.7 2,216,758 + AO353_10125 0.53 -0.2 2,216,758 + AO353_10125 0.53 -0.3 2,216,758 + AO353_10125 0.53 +0.2 2,216,759 - AO353_10125 0.53 +0.3 2,216,759 - AO353_10125 0.53 -0.3 2,216,759 - AO353_10125 0.53 +0.0 2,216,759 - AO353_10125 0.53 -0.2 2,216,759 - AO353_10125 0.53 -0.1 2,216,759 - AO353_10125 0.53 +0.5 2,216,759 - AO353_10125 0.53 +0.1 2,216,759 - AO353_10125 0.53 +0.2 2,216,759 - AO353_10125 0.53 +1.5 2,216,903 + AO353_10125 0.69 +0.7 2,216,903 + AO353_10125 0.69 -0.2 2,216,903 + AO353_10125 0.69 +1.2 2,216,903 + AO353_10125 0.69 +1.8 2,216,903 + AO353_10125 0.69 -0.6 2,216,903 + AO353_10125 0.69 -0.0 2,216,903 + AO353_10125 0.69 +0.8 2,216,904 - AO353_10125 0.69 -0.5 2,216,904 - AO353_10125 0.69 +1.3 2,216,904 - AO353_10125 0.69 -0.5 2,216,904 - AO353_10125 0.69 +0.3 2,216,904 - AO353_10125 0.69 +0.3 2,216,904 - AO353_10125 0.69 +0.5 2,216,979 + AO353_10125 0.78 -0.5 2,216,979 + AO353_10125 0.78 +1.0 2,216,980 - AO353_10125 0.78 -0.5 2,217,245 + AO353_10130 0.10 -0.2 2,217,828 + -1.6 2,217,828 + -1.0 2,217,828 + +0.1 2,217,828 + +0.3 2,217,828 + -1.4 2,217,828 + -0.4 2,217,828 + -0.3 2,217,828 + +0.2 2,217,828 + +0.1 2,217,828 + -1.3 2,217,828 + +0.0 2,217,828 + -1.6 2,217,828 + +0.6 2,217,828 + -0.3 2,217,828 + +0.5 2,217,828 + +0.4 2,217,828 + -2.1 2,217,828 + +1.1 2,217,828 + +0.4 2,217,829 - -0.7 2,217,829 - -1.8 2,217,829 - +0.0 2,217,829 - -0.3 2,217,829 - -0.1 2,217,829 - -0.7 2,217,829 - +0.7 2,217,829 - +0.3 2,217,829 - -0.4 2,217,829 - +0.2 2,217,829 - +0.7 2,217,829 - -0.5 2,217,841 + -1.1 2,217,841 + -1.3 2,217,841 + -0.0 2,217,841 + +0.4 2,217,904 + -0.3 2,217,904 + -1.2 2,217,919 + +0.5 2,218,158 + AO353_10135 0.36 +0.3 2,218,159 - AO353_10135 0.36 +1.4 2,218,159 - AO353_10135 0.36 +0.4 2,218,320 + AO353_10135 0.55 +0.3 2,218,321 - AO353_10135 0.55 -0.7 2,218,321 - AO353_10135 0.55 +1.3 2,218,587 + AO353_10135 0.86 -1.6 2,218,587 + AO353_10135 0.86 +0.1 2,218,587 + AO353_10135 0.86 -0.3 2,218,587 + AO353_10135 0.86 -1.2 2,218,588 - AO353_10135 0.86 -0.9 2,218,588 - AO353_10135 0.86 -1.4 2,218,588 - AO353_10135 0.86 +1.0 2,218,588 - AO353_10135 0.86 +0.1 2,218,590 + AO353_10135 0.86 +0.2 2,218,590 + AO353_10135 0.86 +0.2 2,218,590 + AO353_10135 0.86 -0.9 2,218,590 + AO353_10135 0.86 +0.4 2,218,590 + AO353_10135 0.86 -0.1 2,218,591 - AO353_10135 0.86 -1.2 2,218,591 - AO353_10135 0.86 -0.7 2,218,591 - AO353_10135 0.86 -0.5 2,218,591 - AO353_10135 0.86 +0.2 2,218,591 - AO353_10135 0.86 -0.8 2,218,625 - +0.3 2,218,638 + +0.0 2,218,638 + +1.6 2,218,638 + +0.4 2,218,638 + -0.3 2,218,639 - -0.9 2,218,639 - -0.7 2,218,639 - -0.3 2,218,639 - -0.5 2,218,639 - +0.2 2,218,639 - -0.8 2,218,639 - +0.6 2,218,731 + +0.1 2,218,731 + +0.7 2,218,731 + +0.4 2,218,731 + -1.9 2,218,731 + -0.6 2,218,732 - +1.0 2,218,732 - +1.4 2,218,732 - +0.5 2,218,732 - -1.8 2,218,732 - -0.7 2,218,732 - +0.1 2,218,732 - -0.4 2,218,732 - +0.2
Or see this region's nucleotide sequence