Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05705

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
1,259,452	+		AO353_05700	0.61	-4.2
1,259,452	+		AO353_05700	0.61	-0.3
1,259,452	+		AO353_05700	0.61	-3.2
1,259,452	+		AO353_05700	0.61	-2.6
1,259,452	+		AO353_05700	0.61	-2.1
1,259,452	+		AO353_05700	0.61	-3.0
1,259,452	+		AO353_05700	0.61	-0.9
1,259,452	+		AO353_05700	0.61	+0.7
1,259,453	-		AO353_05700	0.61	-2.9
1,259,453	-		AO353_05700	0.61	-3.2
1,259,453	-		AO353_05700	0.61	-2.2
1,259,453	-		AO353_05700	0.61	-2.3
1,259,453	-		AO353_05700	0.61	-2.6
1,259,453	-		AO353_05700	0.61	-1.1
1,259,453	-		AO353_05700	0.61	-2.4
1,259,453	-		AO353_05700	0.61	-2.0
1,259,453	-		AO353_05700	0.61	-4.1
1,259,453	-		AO353_05700	0.61	-2.1
1,259,519	+		AO353_05700	0.65	-3.0
1,259,643	+		AO353_05700	0.72	-1.1
1,259,682	+		AO353_05700	0.74	-2.0
1,259,682	+		AO353_05700	0.74	-1.8
1,259,728	+		AO353_05700	0.77	-2.8
1,259,728	+		AO353_05700	0.77	-0.1
1,259,729	-		AO353_05700	0.77	-1.5
1,259,729	-		AO353_05700	0.77	-2.0
1,259,729	-				-0.1
1,259,729	-		AO353_05700	0.77	-1.7
1,259,729	-		AO353_05700	0.77	-2.2
1,259,729	-		AO353_05700	0.77	-2.7
1,259,729	-		AO353_05700	0.77	-0.8
1,259,759	+		AO353_05700	0.79	-1.3
1,259,759	+		AO353_05700	0.79	-1.5
1,259,759	+		AO353_05700	0.79	-3.0
1,259,760	-		AO353_05700	0.79	-1.2
1,260,044	+				-1.7
1,260,044	+				-2.5
1,260,045	-				-2.8
1,260,045	-				-0.6
1,260,045	-				-2.8
1,260,045	-				-4.0
1,260,045	-				-2.0
1,260,045	-				-2.0
1,260,088	+				-1.6
1,260,089	-				-0.3
1,260,089	-				-1.9
1,260,115	+				-1.3
1,260,115	+				+0.4
1,260,115	+				+1.2
1,260,115	+				+0.2
1,260,116	-				-1.5
1,260,116	-				-2.5
1,260,116	-				-1.1
1,260,116	-				-2.8
1,260,116	-				-1.3
1,260,116	-				-2.1
1,260,121	+				-0.5
1,260,121	+				-1.8
1,260,121	+				-0.0
1,260,121	+				-0.6
1,260,122	-				-0.9
1,260,122	-				-1.1
1,260,155	+				-1.6
1,260,156	-				-2.2
1,260,214	+				-1.8
1,260,214	+				-2.9
1,260,215	-				-0.6
1,260,215	-				-2.3
1,260,215	-				-3.0
1,260,216	+				-0.1
1,260,216	+				-2.8
1,260,216	+				-3.4
1,260,216	+				-2.7
1,260,216	+				-2.4
1,260,216	+				-4.4
1,260,216	+				-3.3
1,260,216	+				-1.5
1,260,216	+				-2.1
1,260,216	+				-2.2
1,260,217	-				-1.7
1,260,217	-				-1.9
1,260,217	-				-1.5
1,260,217	-				-2.6
1,260,283	+				-2.2
1,260,283	+				-0.9
1,260,284	-				+0.4
1,260,341	-				-1.8
1,260,367	+		AO353_05705	0.12	-2.2
1,260,367	+		AO353_05705	0.12	-3.3
1,260,367	+		AO353_05705	0.12	-1.3
1,260,367	+		AO353_05705	0.12	-2.5
1,260,367	+		AO353_05705	0.12	-2.4
1,260,367	+		AO353_05705	0.12	-1.8
1,260,461	-		AO353_05705	0.23	-4.3
1,260,496	+		AO353_05705	0.28	-2.9
1,260,496	+		AO353_05705	0.28	-0.9
1,260,496	+		AO353_05705	0.28	-3.0
1,260,497	-		AO353_05705	0.28	-1.6
1,260,497	-		AO353_05705	0.28	-3.5
1,260,497	-		AO353_05705	0.28	-3.2
1,260,497	-		AO353_05705	0.28	-3.6
1,260,509	-		AO353_05705	0.29	-3.0
1,260,616	+		AO353_05705	0.42	-2.0
1,260,616	+		AO353_05705	0.42	-2.2
1,260,616	+		AO353_05705	0.42	-4.6
1,260,682	+		AO353_05705	0.50	-3.3
1,260,682	+		AO353_05705	0.50	-2.0
1,260,682	+		AO353_05705	0.50	-1.3
1,260,682	+		AO353_05705	0.50	-3.3
1,260,682	+		AO353_05705	0.50	-2.7
1,260,682	+		AO353_05705	0.50	-2.0
1,260,682	+		AO353_05705	0.50	-2.5
1,260,682	+		AO353_05705	0.50	-2.3
1,260,682	+		AO353_05705	0.50	-0.5
1,260,683	-		AO353_05705	0.50	-0.9
1,260,683	-		AO353_05705	0.50	-0.8
1,260,683	-		AO353_05705	0.50	-0.8
1,260,683	-		AO353_05705	0.50	-1.5
1,261,258	+		AO353_05710	0.12	-3.7
1,261,258	+		AO353_05710	0.12	-1.2
1,261,258	+		AO353_05710	0.12	-2.4
1,261,258	+		AO353_05710	0.12	-1.8
1,261,258	+		AO353_05710	0.12	-2.8
1,261,258	+		AO353_05710	0.12	-2.5
1,261,258	+		AO353_05710	0.12	-1.1
1,261,258	+		AO353_05710	0.12	-2.6
1,261,259	-		AO353_05710	0.12	-2.4
1,261,259	-		AO353_05710	0.12	-3.4
1,261,259	-		AO353_05710	0.12	+0.2
1,261,259	-		AO353_05710	0.12	-2.6
1,261,259	-		AO353_05710	0.12	-4.1
1,261,259	-		AO353_05710	0.12	-2.7
1,261,259	-		AO353_05710	0.12	-1.3
1,261,277	+		AO353_05710	0.13	-2.1
1,261,277	+		AO353_05710	0.13	-0.8
1,261,277	+		AO353_05710	0.13	-1.7
1,261,277	+		AO353_05710	0.13	-1.3
1,261,277	+		AO353_05710	0.13	-2.5
1,261,277	+		AO353_05710	0.13	-2.5
1,261,277	+		AO353_05710	0.13	-4.2
1,261,277	+		AO353_05710	0.13	-1.1
1,261,277	+		AO353_05710	0.13	-0.6
1,261,278	-		AO353_05710	0.13	-0.8
1,261,565	+		AO353_05710	0.33	-3.5
1,261,565	+		AO353_05710	0.33	-3.9
1,261,565	+		AO353_05710	0.33	-1.8
1,261,565	+		AO353_05710	0.33	-1.1
1,261,565	+		AO353_05710	0.33	+0.8
1,261,565	+		AO353_05710	0.33	-2.7
1,261,565	+		AO353_05710	0.33	-1.0
1,261,565	+		AO353_05710	0.33	-1.9
1,261,565	+		AO353_05710	0.33	-3.6
1,261,565	+		AO353_05710	0.33	-1.8
1,261,565	+		AO353_05710	0.33	-3.2
1,261,565	+		AO353_05710	0.33	-3.9
1,261,565	+		AO353_05710	0.33	-3.7
1,261,566	-		AO353_05710	0.33	-2.1
1,261,566	-		AO353_05710	0.33	-2.9
1,261,566	-		AO353_05710	0.33	-1.8
1,261,566	-		AO353_05710	0.33	-0.6
1,261,566	-		AO353_05710	0.33	-2.9
1,261,566	-		AO353_05710	0.33	-0.3
1,261,566	-		AO353_05710	0.33	-1.3
1,261,566	-		AO353_05710	0.33	-2.8
1,261,566	-		AO353_05710	0.33	-1.8
1,261,566	-		AO353_05710	0.33	-4.5
1,261,566	-		AO353_05710	0.33	-1.5
1,261,566	-		AO353_05710	0.33	-1.8
1,261,566	-		AO353_05710	0.33	-0.6
1,261,568	+		AO353_05710	0.33	-1.7
1,261,568	+		AO353_05710	0.33	-0.8
1,261,568	+		AO353_05710	0.33	-0.6
1,261,568	+		AO353_05710	0.33	-2.8
1,261,568	+		AO353_05710	0.33	-2.8
1,261,568	+		AO353_05710	0.33	-0.9
1,261,568	+		AO353_05710	0.33	-0.8
1,261,569	-		AO353_05710	0.33	-3.4
1,261,569	-		AO353_05710	0.33	-3.1
1,261,569	-		AO353_05710	0.33	-0.9
1,261,569	-		AO353_05710	0.33	-2.2
1,261,569	-		AO353_05710	0.33	-0.7
1,261,569	-		AO353_05710	0.33	-2.5
1,261,569	-		AO353_05710	0.33	-3.3
1,261,635	+		AO353_05710	0.38	-1.8
1,261,635	+		AO353_05710	0.38	-2.5
1,261,635	+		AO353_05710	0.38	-1.5
1,261,635	+		AO353_05710	0.38	-2.6
1,261,635	+		AO353_05710	0.38	-2.2
1,261,635	+		AO353_05710	0.38	-1.1
1,261,635	+		AO353_05710	0.38	-1.1
1,261,635	+		AO353_05710	0.38	-2.8
1,261,635	+		AO353_05710	0.38	-2.6
1,261,636	-		AO353_05710	0.38	-1.1
1,261,636	-		AO353_05710	0.38	-1.8
1,261,636	-		AO353_05710	0.38	-3.3
1,261,636	-		AO353_05710	0.38	-2.2
1,261,861	+		AO353_05710	0.53	-2.4
1,261,861	+		AO353_05710	0.53	-1.6
1,261,862	-		AO353_05710	0.53	-1.1
1,261,862	-		AO353_05710	0.53	-2.1
1,261,862	-		AO353_05710	0.53	-0.6
1,261,914	+		AO353_05710	0.57	-0.8
1,261,914	+		AO353_05710	0.57	+0.2
1,261,914	+		AO353_05710	0.57	-2.8
1,261,914	+		AO353_05710	0.57	-1.2
1,261,914	+		AO353_05710	0.57	-1.0
1,261,914	+		AO353_05710	0.57	-0.8
1,261,914	+		AO353_05710	0.57	-0.9
1,261,914	+		AO353_05710	0.57	-1.8
1,261,915	-		AO353_05710	0.57	+0.2
1,261,915	-		AO353_05710	0.57	-0.1
1,261,915	-		AO353_05710	0.57	-1.8
1,261,915	-		AO353_05710	0.57	-2.4
1,261,915	-		AO353_05710	0.57	-1.2
1,261,915	-		AO353_05710	0.57	-0.9
1,261,915	-		AO353_05710	0.57	-2.2
1,261,915	-		AO353_05710	0.57	-0.9
1,261,915	-		AO353_05710	0.57	-2.7
1,261,915	-		AO353_05710	0.57	-1.8
1,262,082	+		AO353_05710	0.68	+0.5
1,262,082	+		AO353_05710	0.68	-1.2
1,262,083	-		AO353_05710	0.68	-3.3