Strain Fitness in Pantoea sp. MT58 around IAI47_14950

Experiment: Cadmium acetate 8 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 8 uM, anaerobic
3,151,937	+				+1.7
3,151,938	-				+1.2
3,151,992	+				+0.5
3,152,010	+				+0.2
3,152,010	+				+2.5
3,152,010	+				-1.7
3,152,010	+				-0.5
3,152,010	+				-1.3
3,152,010	+				-1.0
3,152,010	+				-0.3
3,152,010	+				+0.2
3,152,011	-				-0.2
3,152,011	-				-0.2
3,152,011	-				+0.6
3,152,011	-				-0.7
3,152,011	-				+1.2
3,152,015	+				-0.1
3,152,015	+				-0.8
3,152,015	+				-2.2
3,152,015	+				+0.0
3,152,015	+				-0.1
3,152,016	-				-1.5
3,152,036	+				+0.5
3,152,036	+				+0.4
3,152,036	+				-2.3
3,152,036	+				+0.3
3,152,037	-				+0.1
3,152,037	-				-0.1
3,152,152	+		IAI47_14945	0.12	-0.8
3,152,204	+		IAI47_14945	0.18	-1.2
3,152,204	+		IAI47_14945	0.18	-1.8
3,152,299	-		IAI47_14945	0.30	-0.5
3,152,422	+		IAI47_14945	0.45	-1.3
3,152,423	-		IAI47_14945	0.45	-0.8
3,152,547	-		IAI47_14945	0.60	-0.8
3,152,591	+		IAI47_14945	0.66	-1.9
3,152,592	-		IAI47_14945	0.66	-1.4
3,152,592	-		IAI47_14945	0.66	-2.7
3,152,599	+		IAI47_14945	0.67	-1.1
3,152,599	+		IAI47_14945	0.67	-0.8
3,152,599	+		IAI47_14945	0.67	-2.1
3,152,599	+		IAI47_14945	0.67	-1.2
3,152,599	+		IAI47_14945	0.67	-1.1
3,152,926	-				+0.3
3,153,010	+				+1.8
3,153,010	+				+0.0
3,153,011	-				+0.4
3,153,011	-				-1.2
3,153,012	+				+0.6
3,153,012	+				-0.2
3,153,012	+				+0.6
3,153,012	+				+0.4
3,153,012	+				-0.6
3,153,012	+				+1.5
3,153,012	+				+0.8
3,153,012	+				-0.0
3,153,013	-				-0.5
3,153,013	-				+0.3
3,153,013	-				-1.6
3,153,013	-				-0.8
3,153,013	-				+1.5
3,153,013	-				-1.0
3,153,013	-				-0.2
3,153,013	-				-0.3
3,153,013	-				+0.6
3,153,013	-				-0.5
3,153,016	+				+0.2
3,153,016	+				+0.2
3,153,016	+				+0.6
3,153,016	+				+1.6
3,153,016	+				-0.5
3,153,017	-				+1.9
3,153,017	-				-0.7
3,153,017	-				+0.5
3,153,017	-				+0.9
3,153,057	+				-1.7
3,153,057	+				+0.7
3,153,058	-				+0.5
3,153,058	-				+0.9
3,153,076	+				+1.2
3,153,095	+		IAI47_14950	0.11	-0.1
3,153,095	+		IAI47_14950	0.11	-0.4
3,153,096	-		IAI47_14950	0.11	-0.3
3,153,132	+		IAI47_14950	0.14	-1.0
3,153,132	+		IAI47_14950	0.14	-1.0
3,153,132	+		IAI47_14950	0.14	-2.0
3,153,132	+		IAI47_14950	0.14	-1.7
3,153,132	+		IAI47_14950	0.14	+0.5
3,153,132	+		IAI47_14950	0.14	-1.0
3,153,132	+		IAI47_14950	0.14	-1.2
3,153,133	-		IAI47_14950	0.14	+0.9
3,153,133	-		IAI47_14950	0.14	-0.7
3,153,133	-		IAI47_14950	0.14	+0.3
3,153,133	-		IAI47_14950	0.14	+0.0
3,153,138	+		IAI47_14950	0.14	+0.6
3,153,138	+		IAI47_14950	0.14	-0.9
3,153,139	-		IAI47_14950	0.14	-0.8
3,153,151	-		IAI47_14950	0.15	+1.1
3,153,205	+		IAI47_14950	0.18	-0.6
3,153,205	+		IAI47_14950	0.18	+1.0
3,153,205	+		IAI47_14950	0.18	-0.7
3,153,205	+		IAI47_14950	0.18	-0.5
3,153,205	+		IAI47_14950	0.18	-0.2
3,153,205	+		IAI47_14950	0.18	+0.3
3,153,205	+		IAI47_14950	0.18	-0.7
3,153,205	+		IAI47_14950	0.18	-0.9
3,153,205	+		IAI47_14950	0.18	-1.0
3,153,205	+		IAI47_14950	0.18	-0.5
3,153,206	-		IAI47_14950	0.18	-1.0
3,153,206	-		IAI47_14950	0.18	+0.7
3,153,246	+		IAI47_14950	0.21	-1.5
3,153,246	+		IAI47_14950	0.21	+0.4
3,153,256	+		IAI47_14950	0.22	+0.5
3,153,282	+		IAI47_14950	0.23	+0.5
3,153,283	-		IAI47_14950	0.24	-0.1
3,153,283	-		IAI47_14950	0.24	-0.2
3,153,283	-		IAI47_14950	0.24	+0.3
3,153,310	+		IAI47_14950	0.25	-0.6
3,153,310	+		IAI47_14950	0.25	+0.4
3,153,310	+		IAI47_14950	0.25	-0.7
3,153,310	+		IAI47_14950	0.25	+0.3
3,153,310	+		IAI47_14950	0.25	-0.6
3,153,311	-		IAI47_14950	0.25	+0.3
3,153,311	-		IAI47_14950	0.25	-0.3
3,153,311	-		IAI47_14950	0.25	+0.0
3,153,311	-		IAI47_14950	0.25	-1.5
3,153,311	-		IAI47_14950	0.25	+0.1
3,153,311	-		IAI47_14950	0.25	-2.8
3,153,313	+		IAI47_14950	0.25	+1.9
3,153,313	+		IAI47_14950	0.25	+0.0
3,153,313	+		IAI47_14950	0.25	+0.5
3,153,313	+		IAI47_14950	0.25	+1.1
3,153,314	-		IAI47_14950	0.26	+0.4
3,153,314	-		IAI47_14950	0.26	-0.1
3,153,379	+		IAI47_14950	0.30	-1.1
3,153,380	-		IAI47_14950	0.30	+0.7
3,153,380	-		IAI47_14950	0.30	+0.2
3,153,380	-		IAI47_14950	0.30	+1.3
3,153,380	-		IAI47_14950	0.30	-1.0
3,153,424	+		IAI47_14950	0.33	+0.2
3,153,464	+		IAI47_14950	0.35	-0.2
3,153,464	+		IAI47_14950	0.35	-0.2
3,153,464	+		IAI47_14950	0.35	+0.1
3,153,465	-		IAI47_14950	0.35	+0.0
3,153,465	-		IAI47_14950	0.35	-0.3
3,153,537	+		IAI47_14950	0.40	+0.1
3,153,543	+		IAI47_14950	0.41	+0.1
3,153,544	-		IAI47_14950	0.41	+1.2
3,153,544	-		IAI47_14950	0.41	+1.1
3,153,613	+		IAI47_14950	0.45	+0.8
3,153,613	+		IAI47_14950	0.45	-1.5
3,153,614	-		IAI47_14950	0.45	+0.1
3,153,680	-		IAI47_14950	0.50	-0.2
3,153,823	+		IAI47_14950	0.59	+0.1
3,153,877	+		IAI47_14950	0.62	-0.7
3,153,877	+		IAI47_14950	0.62	+0.7
3,153,877	+		IAI47_14950	0.62	+0.0
3,153,878	-		IAI47_14950	0.62	-1.4
3,153,937	+		IAI47_14950	0.66	+0.2
3,153,938	-		IAI47_14950	0.66	+0.4
3,153,940	+		IAI47_14950	0.67	+0.4
3,153,941	-		IAI47_14950	0.67	-0.1
3,153,987	+		IAI47_14950	0.70	+0.7
3,153,987	+		IAI47_14950	0.70	-0.6
3,153,987	+		IAI47_14950	0.70	-1.5
3,153,988	-		IAI47_14950	0.70	-0.4
3,153,988	-		IAI47_14950	0.70	-0.1
3,153,988	-		IAI47_14950	0.70	+0.7
3,153,988	-		IAI47_14950	0.70	+1.1
3,154,016	+		IAI47_14950	0.72	-1.1
3,154,030	+		IAI47_14950	0.72	+0.5
3,154,031	-		IAI47_14950	0.72	+0.2
3,154,055	+		IAI47_14950	0.74	-0.1
3,154,085	+		IAI47_14950	0.76	+0.1
3,154,085	+		IAI47_14950	0.76	-0.9
3,154,085	+		IAI47_14950	0.76	+0.3
3,154,085	+		IAI47_14950	0.76	-0.7
3,154,085	+		IAI47_14950	0.76	+0.2
3,154,085	+		IAI47_14950	0.76	+2.0
3,154,085	+		IAI47_14950	0.76	+1.6
3,154,085	+		IAI47_14950	0.76	+0.7
3,154,086	-		IAI47_14950	0.76	+0.1
3,154,086	-		IAI47_14950	0.76	-1.3
3,154,086	-		IAI47_14950	0.76	-0.9
3,154,086	-		IAI47_14950	0.76	+0.6
3,154,086	-		IAI47_14950	0.76	+0.7
3,154,086	-		IAI47_14950	0.76	+1.1
3,154,086	-		IAI47_14950	0.76	+0.2
3,154,086	-		IAI47_14950	0.76	-0.9
3,154,086	-		IAI47_14950	0.76	-1.8
3,154,086	-		IAI47_14950	0.76	-0.6
3,154,088	+		IAI47_14950	0.76	+0.9
3,154,088	+		IAI47_14950	0.76	-0.8
3,154,088	+		IAI47_14950	0.76	+0.7
3,154,088	+		IAI47_14950	0.76	+0.3
3,154,089	-		IAI47_14950	0.76	+0.5
3,154,089	-		IAI47_14950	0.76	+1.4
3,154,089	-		IAI47_14950	0.76	-0.2
3,154,095	+		IAI47_14950	0.77	-0.0
3,154,095	+		IAI47_14950	0.77	+2.0
3,154,095	+		IAI47_14950	0.77	+0.1
3,154,095	+		IAI47_14950	0.77	-0.2
3,154,095	+		IAI47_14950	0.77	+0.1
3,154,096	-		IAI47_14950	0.77	+3.8
3,154,096	-		IAI47_14950	0.77	+1.2
3,154,096	-		IAI47_14950	0.77	-0.9
3,154,096	-		IAI47_14950	0.77	+0.7
3,154,154	+		IAI47_14950	0.81	-0.6
3,154,155	-		IAI47_14950	0.81	+0.9
3,154,188	+		IAI47_14950	0.83	-0.2
3,154,205	+		IAI47_14950	0.84	-0.7
3,154,255	+		IAI47_14950	0.87	+0.0
3,154,255	+		IAI47_14950	0.87	+1.4
3,154,256	-		IAI47_14950	0.87	+0.7
3,154,368	-				-0.4
3,154,368	-				+0.3
3,154,370	+				-0.1
3,154,370	+				+1.2
3,154,370	+				+0.1
3,154,370	+				+0.6
3,154,370	+				-0.4
3,154,371	-				+0.1
3,154,371	-				-0.7
3,154,371	-				+0.9
3,154,371	-				+1.6
3,154,371	-				-0.3
3,154,371	-				+1.2
3,154,371	-				-0.0
3,154,397	-				+0.3
3,154,443	+				-0.9
3,154,443	+				+0.5
3,154,444	-				+1.8
3,154,480	+				+1.0
3,154,480	+				+0.5
3,154,480	+				+0.7
3,154,480	+				-0.1
3,154,480	+				+0.8
3,154,480	+				+0.4
3,154,481	-				-0.4
3,154,481	-				+0.3
3,154,481	-				-0.2
3,154,481	-				+1.2
3,154,481	-				+0.8
3,154,481	-				-0.2
3,154,517	+				+0.3
3,154,518	-				-0.4
3,154,518	-				+0.1
3,154,526	+				+0.2
3,154,526	+				+0.2
3,154,526	+				+0.7
3,154,527	-				+0.2
3,154,527	-				-0.1
3,154,527	-				+1.7
3,154,527	-				+1.2
3,154,578	+				+0.4
3,154,599	-				+0.8
3,154,599	-				+0.5
3,154,604	-				-1.3
3,154,604	-				-0.7
3,154,604	-				-0.1
3,154,706	-				-0.3
3,154,715	-		IAI47_14955	0.12	+0.3
3,154,828	+		IAI47_14955	0.49	+0.4
3,154,828	+		IAI47_14955	0.49	+0.1
3,154,829	-		IAI47_14955	0.50	+0.0
3,154,968	-				+0.4
3,154,968	-				+2.1
3,154,987	+				-0.1
3,154,987	+				+1.0
3,154,987	+				+0.0
3,154,988	-				-1.2
3,154,988	-				-1.9
3,155,010	+				-0.1
3,155,011	-				+0.1
3,155,011	-				+0.4
3,155,011	-				+0.2
3,155,011	-				+0.3
3,155,013	+				+2.0
3,155,013	+				-0.4
3,155,013	+				-0.2
3,155,014	-				+0.4
3,155,014	-				+1.0
3,155,028	+				+0.2
3,155,029	-				-0.2
3,155,098	+				+0.9
3,155,098	+				-1.5
3,155,099	-				-0.6
3,155,131	+		IAI47_14960	0.15	+0.2
3,155,131	+		IAI47_14960	0.15	+1.5
3,155,131	+		IAI47_14960	0.15	-0.8
3,155,132	-		IAI47_14960	0.15	+0.0
3,155,132	-		IAI47_14960	0.15	+0.6
3,155,132	-		IAI47_14960	0.15	+0.2
3,155,132	-		IAI47_14960	0.15	-0.0
3,155,183	+		IAI47_14960	0.35	+0.4
3,155,183	+		IAI47_14960	0.35	-0.1
3,155,319	+		IAI47_14960	0.88	+0.6
3,155,320	-		IAI47_14960	0.89	+0.6
3,155,320	-		IAI47_14960	0.89	-0.0
3,155,325	+				+1.4
3,155,326	-				+0.0
3,155,382	+		IAI47_14965	0.18	-0.1
3,155,435	+		IAI47_14965	0.46	+0.6
3,155,446	+		IAI47_14965	0.52	+0.3