Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02994 and CCNA_02995 are separated by 502 nucleotides CCNA_02995 and CCNA_02996 overlap by 32 nucleotides
CCNA_02994: CCNA_02994 - carbamoyl-phosphate synthase large chain, at 3,146,857 to 3,150,156
_02994
CCNA_02995: CCNA_02995 - glutathione S-transferase, at 3,150,659 to 3,151,312
_02995
CCNA_02996: CCNA_02996 - patatin family phospholipase domain protein, at 3,151,281 to 3,152,474
_02996
Position (kb)
3150
3151
3152 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3150.164 kb on - strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.276 kb on + strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.284 kb on - strand at 3150.290 kb on + strand at 3150.290 kb on + strand at 3150.298 kb on - strand at 3150.312 kb on + strand at 3150.331 kb on - strand at 3150.353 kb on + strand at 3150.361 kb on - strand at 3150.364 kb on - strand at 3150.370 kb on + strand at 3150.379 kb on + strand at 3150.381 kb on + strand at 3150.383 kb on + strand at 3150.393 kb on + strand at 3150.393 kb on + strand at 3150.393 kb on + strand at 3150.393 kb on + strand at 3150.393 kb on + strand at 3150.393 kb on + strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.401 kb on - strand at 3150.403 kb on - strand at 3150.406 kb on + strand at 3150.406 kb on + strand at 3150.406 kb on + strand at 3150.414 kb on - strand at 3150.414 kb on - strand at 3150.414 kb on - strand at 3150.414 kb on - strand at 3150.471 kb on - strand at 3150.488 kb on + strand at 3150.540 kb on + strand at 3150.546 kb on - strand at 3150.573 kb on - strand at 3150.574 kb on - strand at 3150.575 kb on + strand at 3150.583 kb on - strand at 3150.583 kb on - strand at 3150.583 kb on - strand at 3150.583 kb on - strand at 3150.583 kb on - strand at 3150.583 kb on - strand at 3150.585 kb on + strand at 3150.593 kb on - strand at 3150.593 kb on - strand at 3150.593 kb on - strand at 3150.620 kb on + strand at 3150.644 kb on + strand at 3150.650 kb on - strand at 3150.652 kb on - strand at 3150.678 kb on + strand at 3150.682 kb on + strand at 3150.685 kb on - strand at 3150.685 kb on - strand at 3150.685 kb on - strand at 3150.690 kb on - strand at 3150.737 kb on + strand, within CCNA_02995 at 3150.749 kb on - strand, within CCNA_02995 at 3150.754 kb on - strand, within CCNA_02995 at 3150.754 kb on - strand at 3150.757 kb on + strand, within CCNA_02995 at 3150.757 kb on + strand, within CCNA_02995 at 3150.765 kb on - strand, within CCNA_02995 at 3150.765 kb on - strand, within CCNA_02995 at 3150.767 kb on + strand, within CCNA_02995 at 3150.776 kb on + strand, within CCNA_02995 at 3150.779 kb on - strand, within CCNA_02995 at 3150.787 kb on + strand, within CCNA_02995 at 3150.795 kb on - strand, within CCNA_02995 at 3150.849 kb on + strand, within CCNA_02995 at 3150.851 kb on + strand, within CCNA_02995 at 3150.867 kb on - strand, within CCNA_02995 at 3150.878 kb on + strand, within CCNA_02995 at 3150.883 kb on + strand, within CCNA_02995 at 3150.888 kb on + strand, within CCNA_02995 at 3150.898 kb on + strand, within CCNA_02995 at 3150.937 kb on - strand, within CCNA_02995 at 3150.946 kb on + strand, within CCNA_02995 at 3150.970 kb on - strand, within CCNA_02995 at 3150.980 kb on - strand, within CCNA_02995 at 3150.986 kb on + strand, within CCNA_02995 at 3150.994 kb on - strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.027 kb on + strand, within CCNA_02995 at 3151.030 kb on - strand, within CCNA_02995 at 3151.035 kb on - strand, within CCNA_02995 at 3151.035 kb on - strand, within CCNA_02995 at 3151.035 kb on - strand, within CCNA_02995 at 3151.035 kb on - strand, within CCNA_02995 at 3151.035 kb on - strand, within CCNA_02995 at 3151.035 kb on - strand, within CCNA_02995 at 3151.035 kb on - strand, within CCNA_02995 at 3151.040 kb on - strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.048 kb on + strand, within CCNA_02995 at 3151.056 kb on - strand, within CCNA_02995 at 3151.056 kb on - strand, within CCNA_02995 at 3151.056 kb on - strand, within CCNA_02995 at 3151.056 kb on - strand, within CCNA_02995 at 3151.056 kb on - strand, within CCNA_02995 at 3151.067 kb on - strand, within CCNA_02995 at 3151.087 kb on + strand, within CCNA_02995 at 3151.113 kb on + strand, within CCNA_02995 at 3151.118 kb on - strand, within CCNA_02995 at 3151.176 kb on - strand, within CCNA_02995 at 3151.183 kb on + strand, within CCNA_02995 at 3151.200 kb on + strand, within CCNA_02995 at 3151.208 kb on - strand, within CCNA_02995 at 3151.264 kb on - strand at 3151.279 kb on + strand at 3151.306 kb on + strand at 3151.321 kb on + strand at 3151.321 kb on + strand at 3151.321 kb on + strand at 3151.329 kb on - strand at 3151.329 kb on - strand at 3151.329 kb on - strand at 3151.329 kb on - strand at 3151.329 kb on - strand at 3151.329 kb on - strand at 3151.339 kb on - strand at 3151.371 kb on - strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.379 kb on + strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.387 kb on - strand at 3151.389 kb on - strand at 3151.390 kb on + strand at 3151.420 kb on - strand, within CCNA_02996 at 3151.425 kb on + strand, within CCNA_02996 at 3151.433 kb on - strand, within CCNA_02996 at 3151.433 kb on - strand, within CCNA_02996 at 3151.444 kb on + strand, within CCNA_02996 at 3151.463 kb on + strand, within CCNA_02996 at 3151.473 kb on + strand, within CCNA_02996 at 3151.487 kb on - strand, within CCNA_02996 at 3151.489 kb on - strand, within CCNA_02996 at 3151.496 kb on + strand, within CCNA_02996 at 3151.497 kb on + strand, within CCNA_02996 at 3151.563 kb on + strand, within CCNA_02996 at 3151.563 kb on + strand, within CCNA_02996 at 3151.571 kb on - strand, within CCNA_02996 at 3151.571 kb on - strand, within CCNA_02996 at 3151.593 kb on - strand, within CCNA_02996 at 3151.593 kb on - strand, within CCNA_02996 at 3151.596 kb on + strand, within CCNA_02996 at 3151.596 kb on + strand, within CCNA_02996 at 3151.597 kb on - strand, within CCNA_02996 at 3151.637 kb on - strand, within CCNA_02996 at 3151.648 kb on - strand, within CCNA_02996 at 3151.655 kb on + strand, within CCNA_02996 at 3151.659 kb on - strand, within CCNA_02996 at 3151.686 kb on + strand, within CCNA_02996 at 3151.694 kb on - strand, within CCNA_02996 at 3151.694 kb on - strand, within CCNA_02996 at 3151.707 kb on - strand, within CCNA_02996 at 3151.814 kb on + strand, within CCNA_02996 at 3151.875 kb on + strand, within CCNA_02996 at 3151.920 kb on + strand, within CCNA_02996 at 3151.933 kb on + strand, within CCNA_02996 at 3151.941 kb on - strand, within CCNA_02996 at 3151.957 kb on + strand, within CCNA_02996 at 3151.965 kb on - strand, within CCNA_02996 at 3152.039 kb on + strand, within CCNA_02996 at 3152.039 kb on + strand, within CCNA_02996 at 3152.039 kb on + strand, within CCNA_02996 at 3152.047 kb on - strand, within CCNA_02996 at 3152.083 kb on + strand, within CCNA_02996 at 3152.090 kb on - strand, within CCNA_02996 at 3152.091 kb on - strand, within CCNA_02996 at 3152.091 kb on - strand, within CCNA_02996 at 3152.091 kb on - strand, within CCNA_02996 at 3152.114 kb on - strand, within CCNA_02996 at 3152.115 kb on - strand, within CCNA_02996 at 3152.135 kb on - strand, within CCNA_02996 at 3152.195 kb on + strand, within CCNA_02996 at 3152.234 kb on + strand, within CCNA_02996 at 3152.242 kb on - strand, within CCNA_02996 at 3152.264 kb on - strand, within CCNA_02996 at 3152.297 kb on - strand, within CCNA_02996 at 3152.297 kb on - strand, within CCNA_02996 at 3152.297 kb on - strand, within CCNA_02996 at 3152.310 kb on + strand, within CCNA_02996
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 3,150,164 - +0.8 3,150,276 + +0.8 3,150,276 + +0.5 3,150,276 + +0.6 3,150,276 + +1.5 3,150,276 + +2.1 3,150,276 + -0.5 3,150,276 + +0.5 3,150,276 + +0.8 3,150,276 + +0.7 3,150,276 + +0.5 3,150,276 + -0.4 3,150,284 - +0.5 3,150,284 - -1.3 3,150,284 - -1.4 3,150,284 - -0.2 3,150,284 - -0.8 3,150,284 - -0.7 3,150,284 - +1.0 3,150,284 - +0.1 3,150,284 - +0.6 3,150,290 + +0.2 3,150,290 + -1.7 3,150,298 - -1.9 3,150,312 + +0.8 3,150,331 - -1.7 3,150,353 + +0.5 3,150,361 - -0.3 3,150,364 - -1.7 3,150,370 + -2.0 3,150,379 + +0.1 3,150,381 + -0.3 3,150,383 + +1.1 3,150,393 + +0.7 3,150,393 + -0.9 3,150,393 + +1.5 3,150,393 + -0.2 3,150,393 + +3.1 3,150,393 + +0.7 3,150,401 - -2.4 3,150,401 - -0.5 3,150,401 - +0.3 3,150,401 - -0.5 3,150,401 - -0.7 3,150,401 - +1.2 3,150,401 - -1.2 3,150,401 - +1.8 3,150,401 - +0.5 3,150,401 - -1.1 3,150,401 - +0.0 3,150,401 - +0.7 3,150,401 - +1.3 3,150,401 - -1.0 3,150,403 - +1.5 3,150,406 + -0.2 3,150,406 + -1.4 3,150,406 + +0.1 3,150,414 - +2.5 3,150,414 - -0.6 3,150,414 - +1.0 3,150,414 - -0.7 3,150,471 - -0.9 3,150,488 + +0.7 3,150,540 + +0.5 3,150,546 - -1.6 3,150,573 - +0.8 3,150,574 - +0.4 3,150,575 + -1.8 3,150,583 - -0.2 3,150,583 - -0.1 3,150,583 - +0.3 3,150,583 - +0.1 3,150,583 - +0.9 3,150,583 - -0.1 3,150,585 + +0.4 3,150,593 - -1.0 3,150,593 - -0.8 3,150,593 - -0.2 3,150,620 + -0.5 3,150,644 + -0.6 3,150,650 - -0.6 3,150,652 - +1.1 3,150,678 + -1.0 3,150,682 + -0.9 3,150,685 - -0.8 3,150,685 - -1.4 3,150,685 - +0.1 3,150,690 - +0.9 3,150,737 + CCNA_02995 0.12 -0.8 3,150,749 - CCNA_02995 0.14 -1.2 3,150,754 - CCNA_02995 0.15 +0.2 3,150,754 - +1.1 3,150,757 + CCNA_02995 0.15 -1.1 3,150,757 + CCNA_02995 0.15 +1.9 3,150,765 - CCNA_02995 0.16 +1.6 3,150,765 - CCNA_02995 0.16 -1.7 3,150,767 + CCNA_02995 0.17 -0.4 3,150,776 + CCNA_02995 0.18 +0.1 3,150,779 - CCNA_02995 0.18 -0.9 3,150,787 + CCNA_02995 0.20 +1.3 3,150,795 - CCNA_02995 0.21 -0.4 3,150,849 + CCNA_02995 0.29 +1.0 3,150,851 + CCNA_02995 0.29 +1.7 3,150,867 - CCNA_02995 0.32 -0.7 3,150,878 + CCNA_02995 0.33 +1.5 3,150,883 + CCNA_02995 0.34 +0.0 3,150,888 + CCNA_02995 0.35 +1.3 3,150,898 + CCNA_02995 0.37 -1.4 3,150,937 - CCNA_02995 0.43 -1.9 3,150,946 + CCNA_02995 0.44 +1.0 3,150,970 - CCNA_02995 0.48 -1.6 3,150,980 - CCNA_02995 0.49 -0.6 3,150,986 + CCNA_02995 0.50 +0.1 3,150,994 - CCNA_02995 0.51 +2.1 3,151,027 + CCNA_02995 0.56 -1.9 3,151,027 + CCNA_02995 0.56 +0.4 3,151,027 + CCNA_02995 0.56 -1.1 3,151,027 + CCNA_02995 0.56 -0.7 3,151,027 + CCNA_02995 0.56 -0.6 3,151,027 + CCNA_02995 0.56 +1.1 3,151,027 + CCNA_02995 0.56 +0.6 3,151,027 + CCNA_02995 0.56 +1.4 3,151,030 - CCNA_02995 0.57 -0.4 3,151,035 - CCNA_02995 0.57 +0.9 3,151,035 - CCNA_02995 0.57 +0.6 3,151,035 - CCNA_02995 0.57 +1.0 3,151,035 - CCNA_02995 0.57 +1.0 3,151,035 - CCNA_02995 0.57 -1.3 3,151,035 - CCNA_02995 0.57 +0.8 3,151,035 - CCNA_02995 0.57 +0.2 3,151,040 - CCNA_02995 0.58 -0.2 3,151,048 + CCNA_02995 0.59 -1.2 3,151,048 + CCNA_02995 0.59 +1.5 3,151,048 + CCNA_02995 0.59 +0.3 3,151,048 + CCNA_02995 0.59 +2.1 3,151,048 + CCNA_02995 0.59 -1.0 3,151,048 + CCNA_02995 0.59 +1.3 3,151,048 + CCNA_02995 0.59 -0.7 3,151,048 + CCNA_02995 0.59 -0.1 3,151,048 + CCNA_02995 0.59 -1.1 3,151,056 - CCNA_02995 0.61 +1.4 3,151,056 - CCNA_02995 0.61 +0.6 3,151,056 - CCNA_02995 0.61 +1.9 3,151,056 - CCNA_02995 0.61 -0.5 3,151,056 - CCNA_02995 0.61 -0.6 3,151,067 - CCNA_02995 0.62 -0.7 3,151,087 + CCNA_02995 0.65 +1.5 3,151,113 + CCNA_02995 0.69 -2.3 3,151,118 - CCNA_02995 0.70 -1.9 3,151,176 - CCNA_02995 0.79 +0.0 3,151,183 + CCNA_02995 0.80 -0.8 3,151,200 + CCNA_02995 0.83 -0.8 3,151,208 - CCNA_02995 0.84 -2.0 3,151,264 - -2.3 3,151,279 + +0.3 3,151,306 + +0.2 3,151,321 + -0.1 3,151,321 + +0.7 3,151,321 + +0.8 3,151,329 - -0.4 3,151,329 - -0.4 3,151,329 - -0.9 3,151,329 - -0.1 3,151,329 - -0.1 3,151,329 - +1.1 3,151,339 - +0.9 3,151,371 - -0.1 3,151,379 + +2.5 3,151,379 + +1.0 3,151,379 + +1.4 3,151,379 + +0.0 3,151,379 + -0.2 3,151,379 + -0.6 3,151,379 + +0.3 3,151,379 + +0.4 3,151,379 + +1.7 3,151,379 + -0.4 3,151,387 - -0.6 3,151,387 - -0.2 3,151,387 - -0.7 3,151,387 - -1.3 3,151,387 - +0.6 3,151,387 - -0.0 3,151,387 - -0.4 3,151,387 - +1.2 3,151,387 - -0.9 3,151,387 - -0.3 3,151,387 - -0.0 3,151,387 - -0.9 3,151,389 - -0.1 3,151,390 + -1.5 3,151,420 - CCNA_02996 0.12 +1.5 3,151,425 + CCNA_02996 0.12 -1.2 3,151,433 - CCNA_02996 0.13 -0.0 3,151,433 - CCNA_02996 0.13 +0.0 3,151,444 + CCNA_02996 0.14 -1.5 3,151,463 + CCNA_02996 0.15 -1.6 3,151,473 + CCNA_02996 0.16 +0.8 3,151,487 - CCNA_02996 0.17 -0.3 3,151,489 - CCNA_02996 0.17 -1.1 3,151,496 + CCNA_02996 0.18 -1.1 3,151,497 + CCNA_02996 0.18 -0.7 3,151,563 + CCNA_02996 0.24 -0.5 3,151,563 + CCNA_02996 0.24 -1.0 3,151,571 - CCNA_02996 0.24 -0.5 3,151,571 - CCNA_02996 0.24 -0.6 3,151,593 - CCNA_02996 0.26 +0.5 3,151,593 - CCNA_02996 0.26 +1.4 3,151,596 + CCNA_02996 0.26 -0.9 3,151,596 + CCNA_02996 0.26 +1.2 3,151,597 - CCNA_02996 0.26 +1.1 3,151,637 - CCNA_02996 0.30 -1.4 3,151,648 - CCNA_02996 0.31 -1.3 3,151,655 + CCNA_02996 0.31 -0.9 3,151,659 - CCNA_02996 0.32 +0.3 3,151,686 + CCNA_02996 0.34 +0.5 3,151,694 - CCNA_02996 0.35 +1.7 3,151,694 - CCNA_02996 0.35 -0.6 3,151,707 - CCNA_02996 0.36 +0.8 3,151,814 + CCNA_02996 0.45 -2.0 3,151,875 + CCNA_02996 0.50 +3.5 3,151,920 + CCNA_02996 0.54 -0.6 3,151,933 + CCNA_02996 0.55 +0.1 3,151,941 - CCNA_02996 0.55 +0.1 3,151,957 + CCNA_02996 0.57 -0.2 3,151,965 - CCNA_02996 0.57 +0.9 3,152,039 + CCNA_02996 0.63 -1.3 3,152,039 + CCNA_02996 0.63 +0.0 3,152,039 + CCNA_02996 0.63 -1.6 3,152,047 - CCNA_02996 0.64 -0.1 3,152,083 + CCNA_02996 0.67 +0.6 3,152,090 - CCNA_02996 0.68 -0.5 3,152,091 - CCNA_02996 0.68 +1.4 3,152,091 - CCNA_02996 0.68 -0.2 3,152,091 - CCNA_02996 0.68 -0.3 3,152,114 - CCNA_02996 0.70 +0.3 3,152,115 - CCNA_02996 0.70 -1.3 3,152,135 - CCNA_02996 0.72 -0.1 3,152,195 + CCNA_02996 0.77 +1.1 3,152,234 + CCNA_02996 0.80 +0.2 3,152,242 - CCNA_02996 0.80 -0.3 3,152,264 - CCNA_02996 0.82 -0.3 3,152,297 - CCNA_02996 0.85 -0.2 3,152,297 - CCNA_02996 0.85 +2.8 3,152,297 - CCNA_02996 0.85 -3.3 3,152,310 + CCNA_02996 0.86 -0.5
Or see this region's nucleotide sequence