Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02694 and CCNA_02695 are separated by 218 nucleotides CCNA_02695 and CCNA_02696 overlap by 4 nucleotides
CCNA_02694: CCNA_02694 - acetamidase/formamidase family protein, at 2,848,273 to 2,849,238
_02694
CCNA_02695: CCNA_02695 - hypothetical protein, at 2,849,457 to 2,849,675
_02695
CCNA_02696: CCNA_02696 - AtzE family amidohydrolase, at 2,849,672 to 2,851,066
_02696
Position (kb)
2849
2850 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2848.468 kb on + strand, within CCNA_02694 at 2848.476 kb on - strand, within CCNA_02694 at 2848.511 kb on - strand, within CCNA_02694 at 2848.551 kb on + strand, within CCNA_02694 at 2848.564 kb on + strand, within CCNA_02694 at 2848.566 kb on - strand, within CCNA_02694 at 2848.573 kb on - strand, within CCNA_02694 at 2848.583 kb on - strand, within CCNA_02694 at 2848.589 kb on - strand, within CCNA_02694 at 2848.590 kb on + strand, within CCNA_02694 at 2848.695 kb on + strand, within CCNA_02694 at 2848.703 kb on - strand, within CCNA_02694 at 2848.736 kb on + strand, within CCNA_02694 at 2848.739 kb on - strand, within CCNA_02694 at 2848.756 kb on - strand, within CCNA_02694 at 2848.756 kb on - strand, within CCNA_02694 at 2848.768 kb on - strand, within CCNA_02694 at 2848.775 kb on - strand, within CCNA_02694 at 2848.775 kb on - strand, within CCNA_02694 at 2848.806 kb on + strand, within CCNA_02694 at 2848.868 kb on - strand, within CCNA_02694 at 2848.883 kb on + strand, within CCNA_02694 at 2848.891 kb on - strand, within CCNA_02694 at 2848.891 kb on - strand, within CCNA_02694 at 2848.895 kb on + strand, within CCNA_02694 at 2848.895 kb on + strand, within CCNA_02694 at 2848.895 kb on + strand, within CCNA_02694 at 2848.903 kb on - strand, within CCNA_02694 at 2848.924 kb on - strand, within CCNA_02694 at 2848.970 kb on - strand, within CCNA_02694 at 2848.993 kb on - strand, within CCNA_02694 at 2849.022 kb on + strand, within CCNA_02694 at 2849.022 kb on + strand, within CCNA_02694 at 2849.030 kb on - strand, within CCNA_02694 at 2849.030 kb on - strand, within CCNA_02694 at 2849.052 kb on - strand, within CCNA_02694 at 2849.052 kb on - strand, within CCNA_02694 at 2849.097 kb on + strand, within CCNA_02694 at 2849.110 kb on - strand, within CCNA_02694 at 2849.185 kb on - strand at 2849.260 kb on + strand at 2849.268 kb on - strand at 2849.268 kb on - strand at 2849.284 kb on + strand at 2849.292 kb on - strand at 2849.292 kb on - strand at 2849.317 kb on + strand at 2849.320 kb on - strand at 2849.330 kb on - strand at 2849.372 kb on - strand at 2849.372 kb on - strand at 2849.372 kb on - strand at 2849.383 kb on + strand at 2849.391 kb on - strand at 2849.392 kb on + strand at 2849.396 kb on + strand at 2849.441 kb on + strand at 2849.508 kb on - strand, within CCNA_02695 at 2849.545 kb on + strand, within CCNA_02695 at 2849.545 kb on + strand, within CCNA_02695 at 2849.545 kb on + strand, within CCNA_02695 at 2849.553 kb on - strand, within CCNA_02695 at 2849.560 kb on + strand, within CCNA_02695 at 2849.560 kb on + strand, within CCNA_02695 at 2849.583 kb on - strand, within CCNA_02695 at 2849.589 kb on + strand, within CCNA_02695 at 2849.595 kb on - strand, within CCNA_02695 at 2849.608 kb on + strand, within CCNA_02695 at 2849.626 kb on - strand, within CCNA_02695 at 2849.666 kb on - strand at 2849.670 kb on - strand at 2849.677 kb on + strand at 2849.707 kb on + strand at 2849.742 kb on - strand at 2849.768 kb on + strand at 2849.882 kb on + strand, within CCNA_02696 at 2849.897 kb on + strand, within CCNA_02696 at 2849.905 kb on - strand, within CCNA_02696 at 2849.933 kb on - strand, within CCNA_02696 at 2849.958 kb on + strand, within CCNA_02696 at 2850.017 kb on + strand, within CCNA_02696 at 2850.017 kb on + strand, within CCNA_02696 at 2850.020 kb on - strand, within CCNA_02696 at 2850.025 kb on - strand, within CCNA_02696 at 2850.025 kb on - strand, within CCNA_02696 at 2850.025 kb on - strand, within CCNA_02696 at 2850.025 kb on - strand, within CCNA_02696 at 2850.042 kb on - strand, within CCNA_02696 at 2850.079 kb on + strand, within CCNA_02696 at 2850.079 kb on + strand, within CCNA_02696 at 2850.138 kb on + strand, within CCNA_02696 at 2850.146 kb on - strand, within CCNA_02696 at 2850.287 kb on + strand, within CCNA_02696 at 2850.302 kb on - strand, within CCNA_02696 at 2850.326 kb on + strand, within CCNA_02696 at 2850.332 kb on + strand, within CCNA_02696 at 2850.332 kb on + strand, within CCNA_02696 at 2850.343 kb on + strand, within CCNA_02696 at 2850.348 kb on + strand, within CCNA_02696 at 2850.351 kb on - strand, within CCNA_02696 at 2850.363 kb on + strand, within CCNA_02696 at 2850.363 kb on + strand, within CCNA_02696 at 2850.363 kb on + strand, within CCNA_02696 at 2850.371 kb on - strand, within CCNA_02696 at 2850.378 kb on - strand, within CCNA_02696 at 2850.442 kb on + strand, within CCNA_02696 at 2850.450 kb on - strand, within CCNA_02696 at 2850.450 kb on - strand, within CCNA_02696 at 2850.460 kb on + strand, within CCNA_02696 at 2850.479 kb on - strand, within CCNA_02696 at 2850.514 kb on - strand, within CCNA_02696 at 2850.629 kb on + strand, within CCNA_02696 at 2850.637 kb on - strand, within CCNA_02696 at 2850.642 kb on - strand, within CCNA_02696 at 2850.649 kb on + strand, within CCNA_02696 at 2850.657 kb on + strand, within CCNA_02696 at 2850.665 kb on + strand, within CCNA_02696
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 2,848,468 + CCNA_02694 0.20 +0.2 2,848,476 - CCNA_02694 0.21 +1.5 2,848,511 - CCNA_02694 0.25 -0.6 2,848,551 + CCNA_02694 0.29 +0.6 2,848,564 + CCNA_02694 0.30 -1.5 2,848,566 - CCNA_02694 0.30 +0.7 2,848,573 - CCNA_02694 0.31 +0.9 2,848,583 - CCNA_02694 0.32 -0.6 2,848,589 - CCNA_02694 0.33 +0.5 2,848,590 + CCNA_02694 0.33 -0.8 2,848,695 + CCNA_02694 0.44 +0.2 2,848,703 - CCNA_02694 0.45 +0.4 2,848,736 + CCNA_02694 0.48 -0.4 2,848,739 - CCNA_02694 0.48 +1.8 2,848,756 - CCNA_02694 0.50 +1.0 2,848,756 - CCNA_02694 0.50 -0.1 2,848,768 - CCNA_02694 0.51 -0.4 2,848,775 - CCNA_02694 0.52 +1.1 2,848,775 - CCNA_02694 0.52 +0.8 2,848,806 + CCNA_02694 0.55 +0.9 2,848,868 - CCNA_02694 0.62 -1.0 2,848,883 + CCNA_02694 0.63 +0.5 2,848,891 - CCNA_02694 0.64 +0.5 2,848,891 - CCNA_02694 0.64 -0.4 2,848,895 + CCNA_02694 0.64 +2.0 2,848,895 + CCNA_02694 0.64 -0.1 2,848,895 + CCNA_02694 0.64 -1.3 2,848,903 - CCNA_02694 0.65 -0.9 2,848,924 - CCNA_02694 0.67 +0.2 2,848,970 - CCNA_02694 0.72 -1.2 2,848,993 - CCNA_02694 0.75 -0.4 2,849,022 + CCNA_02694 0.78 -1.0 2,849,022 + CCNA_02694 0.78 -1.5 2,849,030 - CCNA_02694 0.78 -1.0 2,849,030 - CCNA_02694 0.78 +3.3 2,849,052 - CCNA_02694 0.81 +0.5 2,849,052 - CCNA_02694 0.81 -0.5 2,849,097 + CCNA_02694 0.85 -0.3 2,849,110 - CCNA_02694 0.87 +0.7 2,849,185 - +0.7 2,849,260 + -0.5 2,849,268 - -0.8 2,849,268 - +1.5 2,849,284 + -0.1 2,849,292 - -0.2 2,849,292 - +2.9 2,849,317 + +1.7 2,849,320 - +1.1 2,849,330 - +0.9 2,849,372 - +1.6 2,849,372 - +2.5 2,849,372 - +0.3 2,849,383 + +0.6 2,849,391 - -0.4 2,849,392 + +0.9 2,849,396 + -1.0 2,849,441 + -1.9 2,849,508 - CCNA_02695 0.23 +0.0 2,849,545 + CCNA_02695 0.40 -0.9 2,849,545 + CCNA_02695 0.40 -1.0 2,849,545 + CCNA_02695 0.40 -0.5 2,849,553 - CCNA_02695 0.44 +0.0 2,849,560 + CCNA_02695 0.47 -0.8 2,849,560 + CCNA_02695 0.47 -0.0 2,849,583 - CCNA_02695 0.58 -1.6 2,849,589 + CCNA_02695 0.60 -0.3 2,849,595 - CCNA_02695 0.63 -0.1 2,849,608 + CCNA_02695 0.69 -0.6 2,849,626 - CCNA_02695 0.77 -2.6 2,849,666 - +0.9 2,849,670 - -1.6 2,849,677 + +0.0 2,849,707 + -1.8 2,849,742 - -1.4 2,849,768 + +0.7 2,849,882 + CCNA_02696 0.15 +0.5 2,849,897 + CCNA_02696 0.16 -1.8 2,849,905 - CCNA_02696 0.17 +1.2 2,849,933 - CCNA_02696 0.19 -1.1 2,849,958 + CCNA_02696 0.21 -0.3 2,850,017 + CCNA_02696 0.25 -1.5 2,850,017 + CCNA_02696 0.25 -1.1 2,850,020 - CCNA_02696 0.25 -0.4 2,850,025 - CCNA_02696 0.25 -1.3 2,850,025 - CCNA_02696 0.25 -2.4 2,850,025 - CCNA_02696 0.25 +0.0 2,850,025 - CCNA_02696 0.25 +1.2 2,850,042 - CCNA_02696 0.27 -1.6 2,850,079 + CCNA_02696 0.29 -0.1 2,850,079 + CCNA_02696 0.29 -1.6 2,850,138 + CCNA_02696 0.33 -0.8 2,850,146 - CCNA_02696 0.34 -2.9 2,850,287 + CCNA_02696 0.44 -1.7 2,850,302 - CCNA_02696 0.45 +0.7 2,850,326 + CCNA_02696 0.47 -0.7 2,850,332 + CCNA_02696 0.47 +0.2 2,850,332 + CCNA_02696 0.47 -2.0 2,850,343 + CCNA_02696 0.48 -0.6 2,850,348 + CCNA_02696 0.48 -1.8 2,850,351 - CCNA_02696 0.49 -1.1 2,850,363 + CCNA_02696 0.50 -1.5 2,850,363 + CCNA_02696 0.50 -1.1 2,850,363 + CCNA_02696 0.50 -2.7 2,850,371 - CCNA_02696 0.50 -1.7 2,850,378 - CCNA_02696 0.51 -1.6 2,850,442 + CCNA_02696 0.55 -2.2 2,850,450 - CCNA_02696 0.56 -1.4 2,850,450 - CCNA_02696 0.56 -1.2 2,850,460 + CCNA_02696 0.56 -1.8 2,850,479 - CCNA_02696 0.58 -1.7 2,850,514 - CCNA_02696 0.60 -1.1 2,850,629 + CCNA_02696 0.69 -1.9 2,850,637 - CCNA_02696 0.69 -1.0 2,850,642 - CCNA_02696 0.70 -0.5 2,850,649 + CCNA_02696 0.70 -2.7 2,850,657 + CCNA_02696 0.71 -2.2 2,850,665 + CCNA_02696 0.71 -2.6
Or see this region's nucleotide sequence