Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02690 and CCNA_02691 overlap by 4 nucleotides CCNA_02691 and CCNA_02692 overlap by 4 nucleotides CCNA_02692 and CCNA_02693 are separated by 127 nucleotides
CCNA_02690: CCNA_02690 - cytochrome c domain membrane protein, at 2,843,370 to 2,844,557
_02690
CCNA_02691: CCNA_02691 - TetR-family transcriptional regulator, at 2,844,554 to 2,845,246
_02691
CCNA_02692: CCNA_02692 - YceI-like domain protein, at 2,845,243 to 2,845,935
_02692
CCNA_02693: CCNA_02693 - M10 peptidase-related protein, at 2,846,063 to 2,848,015
_02693
Position (kb)
2844
2845
2846 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2843.595 kb on - strand, within CCNA_02690 at 2843.595 kb on - strand, within CCNA_02690 at 2843.611 kb on + strand, within CCNA_02690 at 2843.613 kb on - strand, within CCNA_02690 at 2843.618 kb on + strand, within CCNA_02690 at 2843.634 kb on - strand, within CCNA_02690 at 2843.663 kb on + strand, within CCNA_02690 at 2843.675 kb on + strand, within CCNA_02690 at 2843.688 kb on - strand, within CCNA_02690 at 2843.710 kb on + strand, within CCNA_02690 at 2843.734 kb on + strand, within CCNA_02690 at 2843.753 kb on - strand, within CCNA_02690 at 2843.753 kb on - strand, within CCNA_02690 at 2843.753 kb on - strand, within CCNA_02690 at 2843.776 kb on - strand, within CCNA_02690 at 2843.798 kb on + strand, within CCNA_02690 at 2843.816 kb on + strand, within CCNA_02690 at 2843.847 kb on + strand, within CCNA_02690 at 2843.873 kb on + strand, within CCNA_02690 at 2843.878 kb on - strand, within CCNA_02690 at 2843.935 kb on - strand, within CCNA_02690 at 2843.953 kb on + strand, within CCNA_02690 at 2843.953 kb on + strand, within CCNA_02690 at 2843.953 kb on + strand, within CCNA_02690 at 2844.039 kb on + strand, within CCNA_02690 at 2844.039 kb on + strand, within CCNA_02690 at 2844.046 kb on + strand, within CCNA_02690 at 2844.047 kb on - strand, within CCNA_02690 at 2844.075 kb on + strand, within CCNA_02690 at 2844.102 kb on + strand, within CCNA_02690 at 2844.113 kb on + strand, within CCNA_02690 at 2844.113 kb on + strand, within CCNA_02690 at 2844.119 kb on + strand, within CCNA_02690 at 2844.127 kb on - strand, within CCNA_02690 at 2844.127 kb on - strand, within CCNA_02690 at 2844.140 kb on + strand, within CCNA_02690 at 2844.143 kb on - strand, within CCNA_02690 at 2844.209 kb on + strand, within CCNA_02690 at 2844.215 kb on + strand at 2844.228 kb on + strand, within CCNA_02690 at 2844.279 kb on + strand, within CCNA_02690 at 2844.297 kb on + strand, within CCNA_02690 at 2844.320 kb on - strand, within CCNA_02690 at 2844.320 kb on - strand, within CCNA_02690 at 2844.325 kb on - strand, within CCNA_02690 at 2844.374 kb on - strand, within CCNA_02690 at 2844.384 kb on - strand, within CCNA_02690 at 2844.394 kb on - strand, within CCNA_02690 at 2844.399 kb on + strand, within CCNA_02690 at 2844.409 kb on + strand, within CCNA_02690 at 2844.417 kb on - strand, within CCNA_02690 at 2844.417 kb on - strand, within CCNA_02690 at 2844.417 kb on - strand, within CCNA_02690 at 2844.468 kb on + strand at 2844.477 kb on - strand at 2844.499 kb on + strand at 2844.531 kb on + strand at 2844.538 kb on - strand at 2844.588 kb on - strand at 2844.588 kb on - strand at 2844.598 kb on - strand at 2844.622 kb on + strand at 2844.736 kb on + strand, within CCNA_02691 at 2844.738 kb on - strand, within CCNA_02691 at 2844.773 kb on + strand, within CCNA_02691 at 2844.773 kb on + strand, within CCNA_02691 at 2844.773 kb on + strand, within CCNA_02691 at 2844.773 kb on + strand, within CCNA_02691 at 2844.773 kb on + strand, within CCNA_02691 at 2844.778 kb on + strand, within CCNA_02691 at 2844.778 kb on + strand, within CCNA_02691 at 2844.778 kb on + strand, within CCNA_02691 at 2844.778 kb on + strand, within CCNA_02691 at 2844.778 kb on + strand, within CCNA_02691 at 2844.778 kb on + strand, within CCNA_02691 at 2844.778 kb on + strand, within CCNA_02691 at 2844.786 kb on - strand, within CCNA_02691 at 2844.786 kb on - strand, within CCNA_02691 at 2844.786 kb on - strand, within CCNA_02691 at 2844.786 kb on - strand, within CCNA_02691 at 2844.786 kb on - strand, within CCNA_02691 at 2844.786 kb on - strand, within CCNA_02691 at 2844.786 kb on - strand, within CCNA_02691 at 2844.804 kb on + strand, within CCNA_02691 at 2844.887 kb on + strand, within CCNA_02691 at 2844.926 kb on + strand, within CCNA_02691 at 2845.032 kb on - strand, within CCNA_02691 at 2845.070 kb on - strand, within CCNA_02691 at 2845.073 kb on + strand, within CCNA_02691 at 2845.073 kb on + strand, within CCNA_02691 at 2845.073 kb on + strand, within CCNA_02691 at 2845.081 kb on - strand, within CCNA_02691 at 2845.081 kb on - strand, within CCNA_02691 at 2845.097 kb on + strand, within CCNA_02691 at 2845.107 kb on + strand, within CCNA_02691 at 2845.107 kb on + strand, within CCNA_02691 at 2845.115 kb on - strand, within CCNA_02691 at 2845.115 kb on - strand, within CCNA_02691 at 2845.125 kb on + strand, within CCNA_02691 at 2845.164 kb on + strand, within CCNA_02691 at 2845.172 kb on - strand, within CCNA_02691 at 2845.207 kb on + strand at 2845.282 kb on - strand at 2845.292 kb on + strand at 2845.352 kb on - strand, within CCNA_02692 at 2845.381 kb on + strand, within CCNA_02692 at 2845.452 kb on + strand, within CCNA_02692 at 2845.460 kb on - strand, within CCNA_02692 at 2845.460 kb on - strand, within CCNA_02692 at 2845.483 kb on - strand, within CCNA_02692 at 2845.485 kb on + strand, within CCNA_02692 at 2845.485 kb on + strand, within CCNA_02692 at 2845.485 kb on + strand, within CCNA_02692 at 2845.485 kb on + strand, within CCNA_02692 at 2845.485 kb on + strand, within CCNA_02692 at 2845.493 kb on - strand, within CCNA_02692 at 2845.493 kb on - strand, within CCNA_02692 at 2845.504 kb on - strand, within CCNA_02692 at 2845.542 kb on + strand, within CCNA_02692 at 2845.542 kb on + strand, within CCNA_02692 at 2845.571 kb on + strand, within CCNA_02692 at 2845.573 kb on - strand, within CCNA_02692 at 2845.582 kb on + strand, within CCNA_02692 at 2845.629 kb on + strand, within CCNA_02692 at 2845.643 kb on + strand, within CCNA_02692 at 2845.676 kb on + strand, within CCNA_02692 at 2845.684 kb on - strand, within CCNA_02692 at 2845.684 kb on - strand, within CCNA_02692 at 2845.684 kb on - strand, within CCNA_02692 at 2845.691 kb on + strand, within CCNA_02692 at 2845.732 kb on - strand, within CCNA_02692 at 2845.754 kb on + strand, within CCNA_02692 at 2845.754 kb on + strand, within CCNA_02692 at 2845.754 kb on + strand, within CCNA_02692 at 2845.762 kb on - strand, within CCNA_02692 at 2845.778 kb on + strand, within CCNA_02692 at 2845.778 kb on + strand, within CCNA_02692 at 2845.778 kb on + strand, within CCNA_02692 at 2845.786 kb on - strand, within CCNA_02692 at 2845.786 kb on - strand, within CCNA_02692 at 2845.786 kb on - strand, within CCNA_02692 at 2845.786 kb on - strand, within CCNA_02692 at 2845.814 kb on + strand, within CCNA_02692 at 2845.814 kb on + strand, within CCNA_02692 at 2845.946 kb on + strand at 2845.952 kb on + strand at 2845.952 kb on + strand at 2845.952 kb on + strand at 2845.952 kb on + strand at 2845.960 kb on - strand at 2845.960 kb on - strand at 2846.056 kb on + strand at 2846.131 kb on - strand at 2846.131 kb on - strand at 2846.155 kb on - strand at 2846.178 kb on - strand at 2846.180 kb on + strand at 2846.190 kb on - strand at 2846.193 kb on + strand at 2846.193 kb on + strand at 2846.201 kb on - strand at 2846.233 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 2,843,595 - CCNA_02690 0.19 +0.4 2,843,595 - CCNA_02690 0.19 +0.3 2,843,611 + CCNA_02690 0.20 +0.0 2,843,613 - CCNA_02690 0.20 +0.1 2,843,618 + CCNA_02690 0.21 +0.7 2,843,634 - CCNA_02690 0.22 +2.5 2,843,663 + CCNA_02690 0.25 -0.6 2,843,675 + CCNA_02690 0.26 -1.9 2,843,688 - CCNA_02690 0.27 +0.4 2,843,710 + CCNA_02690 0.29 +1.2 2,843,734 + CCNA_02690 0.31 -0.6 2,843,753 - CCNA_02690 0.32 -0.6 2,843,753 - CCNA_02690 0.32 -2.8 2,843,753 - CCNA_02690 0.32 -1.2 2,843,776 - CCNA_02690 0.34 -1.2 2,843,798 + CCNA_02690 0.36 +0.5 2,843,816 + CCNA_02690 0.38 -1.0 2,843,847 + CCNA_02690 0.40 -2.2 2,843,873 + CCNA_02690 0.42 -0.6 2,843,878 - CCNA_02690 0.43 +0.2 2,843,935 - CCNA_02690 0.48 -0.4 2,843,953 + CCNA_02690 0.49 -0.4 2,843,953 + CCNA_02690 0.49 -1.2 2,843,953 + CCNA_02690 0.49 -1.7 2,844,039 + CCNA_02690 0.56 +0.0 2,844,039 + CCNA_02690 0.56 -0.8 2,844,046 + CCNA_02690 0.57 -1.9 2,844,047 - CCNA_02690 0.57 -0.6 2,844,075 + CCNA_02690 0.59 -0.4 2,844,102 + CCNA_02690 0.62 -2.4 2,844,113 + CCNA_02690 0.63 -1.5 2,844,113 + CCNA_02690 0.63 +0.7 2,844,119 + CCNA_02690 0.63 -0.1 2,844,127 - CCNA_02690 0.64 -1.1 2,844,127 - CCNA_02690 0.64 -1.8 2,844,140 + CCNA_02690 0.65 -2.5 2,844,143 - CCNA_02690 0.65 -0.2 2,844,209 + CCNA_02690 0.71 -3.7 2,844,215 + +1.5 2,844,228 + CCNA_02690 0.72 -0.8 2,844,279 + CCNA_02690 0.77 -1.4 2,844,297 + CCNA_02690 0.78 -1.5 2,844,320 - CCNA_02690 0.80 +0.5 2,844,320 - CCNA_02690 0.80 -0.6 2,844,325 - CCNA_02690 0.80 -2.9 2,844,374 - CCNA_02690 0.85 -0.2 2,844,384 - CCNA_02690 0.85 +0.8 2,844,394 - CCNA_02690 0.86 -1.6 2,844,399 + CCNA_02690 0.87 +0.2 2,844,409 + CCNA_02690 0.87 -0.9 2,844,417 - CCNA_02690 0.88 -0.3 2,844,417 - CCNA_02690 0.88 +0.3 2,844,417 - CCNA_02690 0.88 -0.7 2,844,468 + -2.4 2,844,477 - -1.0 2,844,499 + -0.7 2,844,531 + +2.5 2,844,538 - -0.6 2,844,588 - +0.4 2,844,588 - +0.2 2,844,598 - -1.2 2,844,622 + +0.6 2,844,736 + CCNA_02691 0.26 +2.1 2,844,738 - CCNA_02691 0.27 -0.9 2,844,773 + CCNA_02691 0.32 +1.8 2,844,773 + CCNA_02691 0.32 +1.5 2,844,773 + CCNA_02691 0.32 +2.0 2,844,773 + CCNA_02691 0.32 +1.5 2,844,773 + CCNA_02691 0.32 +2.0 2,844,778 + CCNA_02691 0.32 +2.1 2,844,778 + CCNA_02691 0.32 +2.0 2,844,778 + CCNA_02691 0.32 +0.1 2,844,778 + CCNA_02691 0.32 +3.7 2,844,778 + CCNA_02691 0.32 +1.6 2,844,778 + CCNA_02691 0.32 +3.1 2,844,778 + CCNA_02691 0.32 +1.6 2,844,786 - CCNA_02691 0.33 +1.5 2,844,786 - CCNA_02691 0.33 -0.1 2,844,786 - CCNA_02691 0.33 +0.1 2,844,786 - CCNA_02691 0.33 +2.5 2,844,786 - CCNA_02691 0.33 +0.5 2,844,786 - CCNA_02691 0.33 +1.2 2,844,786 - CCNA_02691 0.33 +2.8 2,844,804 + CCNA_02691 0.36 -1.3 2,844,887 + CCNA_02691 0.48 +2.7 2,844,926 + CCNA_02691 0.54 +1.8 2,845,032 - CCNA_02691 0.69 -0.4 2,845,070 - CCNA_02691 0.74 +0.7 2,845,073 + CCNA_02691 0.75 +2.7 2,845,073 + CCNA_02691 0.75 +1.5 2,845,073 + CCNA_02691 0.75 +1.8 2,845,081 - CCNA_02691 0.76 +0.1 2,845,081 - CCNA_02691 0.76 -0.5 2,845,097 + CCNA_02691 0.78 +0.1 2,845,107 + CCNA_02691 0.80 +3.7 2,845,107 + CCNA_02691 0.80 +1.5 2,845,115 - CCNA_02691 0.81 -0.2 2,845,115 - CCNA_02691 0.81 +1.3 2,845,125 + CCNA_02691 0.82 +2.1 2,845,164 + CCNA_02691 0.88 +1.9 2,845,172 - CCNA_02691 0.89 +1.7 2,845,207 + +0.6 2,845,282 - -0.1 2,845,292 + +1.0 2,845,352 - CCNA_02692 0.16 -0.6 2,845,381 + CCNA_02692 0.20 +0.2 2,845,452 + CCNA_02692 0.30 +2.4 2,845,460 - CCNA_02692 0.31 +1.5 2,845,460 - CCNA_02692 0.31 +0.7 2,845,483 - CCNA_02692 0.35 -0.9 2,845,485 + CCNA_02692 0.35 +1.5 2,845,485 + CCNA_02692 0.35 +0.4 2,845,485 + CCNA_02692 0.35 -0.2 2,845,485 + CCNA_02692 0.35 -0.4 2,845,485 + CCNA_02692 0.35 +0.0 2,845,493 - CCNA_02692 0.36 +0.1 2,845,493 - CCNA_02692 0.36 -1.4 2,845,504 - CCNA_02692 0.38 +0.2 2,845,542 + CCNA_02692 0.43 -0.4 2,845,542 + CCNA_02692 0.43 -0.9 2,845,571 + CCNA_02692 0.47 -0.5 2,845,573 - CCNA_02692 0.48 -1.7 2,845,582 + CCNA_02692 0.49 +0.3 2,845,629 + CCNA_02692 0.56 -2.0 2,845,643 + CCNA_02692 0.58 +1.2 2,845,676 + CCNA_02692 0.62 +0.5 2,845,684 - CCNA_02692 0.64 -0.1 2,845,684 - CCNA_02692 0.64 +0.3 2,845,684 - CCNA_02692 0.64 +1.0 2,845,691 + CCNA_02692 0.65 +1.4 2,845,732 - CCNA_02692 0.71 +0.4 2,845,754 + CCNA_02692 0.74 +0.3 2,845,754 + CCNA_02692 0.74 +0.5 2,845,754 + CCNA_02692 0.74 -0.3 2,845,762 - CCNA_02692 0.75 +1.0 2,845,778 + CCNA_02692 0.77 +1.2 2,845,778 + CCNA_02692 0.77 -1.9 2,845,778 + CCNA_02692 0.77 -0.2 2,845,786 - CCNA_02692 0.78 +0.1 2,845,786 - CCNA_02692 0.78 -0.1 2,845,786 - CCNA_02692 0.78 +0.0 2,845,786 - CCNA_02692 0.78 -0.3 2,845,814 + CCNA_02692 0.82 -0.6 2,845,814 + CCNA_02692 0.82 +0.2 2,845,946 + -1.9 2,845,952 + +1.1 2,845,952 + -0.6 2,845,952 + +0.5 2,845,952 + -1.5 2,845,960 - -1.1 2,845,960 - +0.6 2,846,056 + +0.2 2,846,131 - -0.2 2,846,131 - -0.2 2,846,155 - +0.7 2,846,178 - +2.5 2,846,180 + +1.1 2,846,190 - -1.9 2,846,193 + +0.1 2,846,193 + +1.3 2,846,201 - +0.7 2,846,233 + -1.3
Or see this region's nucleotide sequence