Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02569

Experiment: Adenosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02568 and CCNA_02569 are separated by 322 nucleotidesCCNA_02569 and CCNA_02570 are separated by 107 nucleotides CCNA_02568: CCNA_02568 - LAO/AO transport system kinase, at 2,719,265 to 2,720,245 _02568 CCNA_02569: CCNA_02569 - glutathione S-transferase, at 2,720,568 to 2,721,197 _02569 CCNA_02570: CCNA_02570 - major facilitator superfamily transporter, at 2,721,305 to 2,722,639 _02570 Position (kb) 2720 2721 2722Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2719.568 kb on - strand, within CCNA_02568at 2719.597 kb on - strand, within CCNA_02568at 2719.597 kb on - strand, within CCNA_02568at 2719.597 kb on - strand, within CCNA_02568at 2719.602 kb on - strand, within CCNA_02568at 2719.602 kb on - strand, within CCNA_02568at 2719.607 kb on - strand, within CCNA_02568at 2719.624 kb on + strand, within CCNA_02568at 2719.651 kb on - strand, within CCNA_02568at 2719.656 kb on - strand, within CCNA_02568at 2719.674 kb on + strand, within CCNA_02568at 2719.717 kb on + strand, within CCNA_02568at 2719.749 kb on - strand, within CCNA_02568at 2719.781 kb on + strand, within CCNA_02568at 2719.794 kb on - strand, within CCNA_02568at 2719.810 kb on + strand, within CCNA_02568at 2719.824 kb on + strand, within CCNA_02568at 2719.832 kb on - strand, within CCNA_02568at 2719.875 kb on - strand, within CCNA_02568at 2719.882 kb on + strand, within CCNA_02568at 2719.890 kb on - strand, within CCNA_02568at 2719.890 kb on - strand, within CCNA_02568at 2719.922 kb on + strand, within CCNA_02568at 2719.924 kb on + strand, within CCNA_02568at 2719.959 kb on + strand, within CCNA_02568at 2719.961 kb on - strand, within CCNA_02568at 2719.988 kb on + strand, within CCNA_02568at 2720.001 kb on - strand, within CCNA_02568at 2720.013 kb on + strand, within CCNA_02568at 2720.075 kb on + strand, within CCNA_02568at 2720.136 kb on - strand, within CCNA_02568at 2720.246 kb on + strandat 2720.254 kb on - strandat 2720.256 kb on - strandat 2720.258 kb on + strandat 2720.259 kb on - strandat 2720.267 kb on - strandat 2720.271 kb on + strandat 2720.309 kb on - strandat 2720.346 kb on - strandat 2720.360 kb on + strandat 2720.383 kb on - strandat 2720.394 kb on + strandat 2720.407 kb on - strandat 2720.407 kb on - strandat 2720.428 kb on + strandat 2720.428 kb on + strandat 2720.430 kb on + strandat 2720.436 kb on - strandat 2720.436 kb on - strandat 2720.438 kb on - strandat 2720.438 kb on - strandat 2720.438 kb on - strandat 2720.453 kb on + strandat 2720.492 kb on - strandat 2720.495 kb on + strandat 2720.501 kb on + strandat 2720.546 kb on + strandat 2720.611 kb on - strandat 2720.629 kb on + strandat 2720.634 kb on + strand, within CCNA_02569at 2720.634 kb on + strand, within CCNA_02569at 2720.637 kb on - strand, within CCNA_02569at 2720.642 kb on - strand, within CCNA_02569at 2720.642 kb on - strand, within CCNA_02569at 2720.642 kb on - strand, within CCNA_02569at 2720.675 kb on + strand, within CCNA_02569at 2720.683 kb on + strand, within CCNA_02569at 2720.683 kb on - strand, within CCNA_02569at 2720.685 kb on - strand, within CCNA_02569at 2720.691 kb on - strand, within CCNA_02569at 2720.691 kb on - strand, within CCNA_02569at 2720.714 kb on - strand, within CCNA_02569at 2720.744 kb on + strand, within CCNA_02569at 2720.776 kb on + strand, within CCNA_02569at 2720.800 kb on + strand, within CCNA_02569at 2720.813 kb on - strand, within CCNA_02569at 2720.815 kb on + strand, within CCNA_02569at 2720.825 kb on + strand, within CCNA_02569at 2720.833 kb on - strand, within CCNA_02569at 2720.855 kb on - strand, within CCNA_02569at 2720.895 kb on - strand, within CCNA_02569at 2720.944 kb on + strand, within CCNA_02569at 2720.944 kb on + strand, within CCNA_02569at 2720.990 kb on + strand, within CCNA_02569at 2721.108 kb on - strand, within CCNA_02569at 2721.214 kb on - strandat 2721.285 kb on - strandat 2721.354 kb on - strandat 2721.363 kb on + strandat 2721.379 kb on - strandat 2721.431 kb on - strandat 2721.465 kb on - strand, within CCNA_02570at 2721.491 kb on + strand, within CCNA_02570at 2721.499 kb on - strand, within CCNA_02570at 2721.499 kb on - strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.508 kb on + strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.516 kb on - strand, within CCNA_02570at 2721.518 kb on + strand, within CCNA_02570at 2721.526 kb on - strand, within CCNA_02570at 2721.526 kb on - strand, within CCNA_02570at 2721.526 kb on - strand, within CCNA_02570at 2721.600 kb on + strand, within CCNA_02570at 2721.600 kb on + strand, within CCNA_02570at 2721.608 kb on - strand, within CCNA_02570at 2721.608 kb on - strand, within CCNA_02570at 2721.608 kb on - strand, within CCNA_02570at 2721.610 kb on + strand, within CCNA_02570at 2721.668 kb on - strand, within CCNA_02570at 2721.697 kb on - strand, within CCNA_02570at 2721.711 kb on + strand, within CCNA_02570at 2721.719 kb on - strand, within CCNA_02570at 2721.778 kb on - strand, within CCNA_02570at 2721.788 kb on - strand, within CCNA_02570at 2721.816 kb on - strand, within CCNA_02570at 2721.868 kb on - strand, within CCNA_02570at 2721.949 kb on + strand, within CCNA_02570at 2722.028 kb on + strand, within CCNA_02570at 2722.044 kb on + strand, within CCNA_02570at 2722.086 kb on + strand, within CCNA_02570at 2722.170 kb on + strand, within CCNA_02570at 2722.170 kb on + strand, within CCNA_02570at 2722.197 kb on + strand, within CCNA_02570

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (N)
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2,719,568 - CCNA_02568 0.31 -1.1
2,719,597 - CCNA_02568 0.34 -0.6
2,719,597 - CCNA_02568 0.34 -1.0
2,719,597 - CCNA_02568 0.34 -1.8
2,719,602 - CCNA_02568 0.34 -0.9
2,719,602 - CCNA_02568 0.34 -1.4
2,719,607 - CCNA_02568 0.35 +0.9
2,719,624 + CCNA_02568 0.37 +0.7
2,719,651 - CCNA_02568 0.39 -0.3
2,719,656 - CCNA_02568 0.40 -0.1
2,719,674 + CCNA_02568 0.42 -1.1
2,719,717 + CCNA_02568 0.46 +0.9
2,719,749 - CCNA_02568 0.49 -0.3
2,719,781 + CCNA_02568 0.53 -0.1
2,719,794 - CCNA_02568 0.54 -0.4
2,719,810 + CCNA_02568 0.56 -2.4
2,719,824 + CCNA_02568 0.57 +1.6
2,719,832 - CCNA_02568 0.58 -0.3
2,719,875 - CCNA_02568 0.62 -1.1
2,719,882 + CCNA_02568 0.63 -2.4
2,719,890 - CCNA_02568 0.64 -1.3
2,719,890 - CCNA_02568 0.64 +0.4
2,719,922 + CCNA_02568 0.67 -1.4
2,719,924 + CCNA_02568 0.67 +0.6
2,719,959 + CCNA_02568 0.71 +0.5
2,719,961 - CCNA_02568 0.71 +0.6
2,719,988 + CCNA_02568 0.74 -0.1
2,720,001 - CCNA_02568 0.75 -0.7
2,720,013 + CCNA_02568 0.76 +0.7
2,720,075 + CCNA_02568 0.83 +0.8
2,720,136 - CCNA_02568 0.89 +1.1
2,720,246 + +0.1
2,720,254 - -0.8
2,720,256 - +1.0
2,720,258 + +0.4
2,720,259 - -0.3
2,720,267 - -0.4
2,720,271 + -2.7
2,720,309 - -0.1
2,720,346 - -0.4
2,720,360 + +0.4
2,720,383 - +0.3
2,720,394 + +1.9
2,720,407 - -0.3
2,720,407 - +1.6
2,720,428 + -0.0
2,720,428 + +0.5
2,720,430 + -0.8
2,720,436 - +0.1
2,720,436 - +1.1
2,720,438 - +2.1
2,720,438 - +0.3
2,720,438 - -0.5
2,720,453 + +1.5
2,720,492 - +0.1
2,720,495 + +2.8
2,720,501 + +0.0
2,720,546 + +1.9
2,720,611 - -1.4
2,720,629 + +0.0
2,720,634 + CCNA_02569 0.10 -0.6
2,720,634 + CCNA_02569 0.10 +1.9
2,720,637 - CCNA_02569 0.11 -2.6
2,720,642 - CCNA_02569 0.12 -3.4
2,720,642 - CCNA_02569 0.12 -2.0
2,720,642 - CCNA_02569 0.12 -2.7
2,720,675 + CCNA_02569 0.17 -0.5
2,720,683 + CCNA_02569 0.18 +0.5
2,720,683 - CCNA_02569 0.18 +1.1
2,720,685 - CCNA_02569 0.19 -0.5
2,720,691 - CCNA_02569 0.20 -1.6
2,720,691 - CCNA_02569 0.20 -1.0
2,720,714 - CCNA_02569 0.23 -2.3
2,720,744 + CCNA_02569 0.28 -1.1
2,720,776 + CCNA_02569 0.33 -0.9
2,720,800 + CCNA_02569 0.37 -1.4
2,720,813 - CCNA_02569 0.39 -0.8
2,720,815 + CCNA_02569 0.39 -2.0
2,720,825 + CCNA_02569 0.41 +0.4
2,720,833 - CCNA_02569 0.42 -2.1
2,720,855 - CCNA_02569 0.46 -0.8
2,720,895 - CCNA_02569 0.52 -0.3
2,720,944 + CCNA_02569 0.60 -1.1
2,720,944 + CCNA_02569 0.60 -1.6
2,720,990 + CCNA_02569 0.67 -0.1
2,721,108 - CCNA_02569 0.86 +1.9
2,721,214 - +0.3
2,721,285 - -0.9
2,721,354 - -0.5
2,721,363 + +0.6
2,721,379 - +1.4
2,721,431 - -1.0
2,721,465 - CCNA_02570 0.12 -0.7
2,721,491 + CCNA_02570 0.14 +0.6
2,721,499 - CCNA_02570 0.15 -0.4
2,721,499 - CCNA_02570 0.15 -0.1
2,721,508 + CCNA_02570 0.15 -0.4
2,721,508 + CCNA_02570 0.15 +0.6
2,721,508 + CCNA_02570 0.15 -0.3
2,721,508 + CCNA_02570 0.15 -1.0
2,721,508 + CCNA_02570 0.15 +0.8
2,721,508 + CCNA_02570 0.15 -1.1
2,721,508 + CCNA_02570 0.15 -0.5
2,721,508 + CCNA_02570 0.15 +0.1
2,721,508 + CCNA_02570 0.15 +1.1
2,721,508 + CCNA_02570 0.15 +0.2
2,721,508 + CCNA_02570 0.15 +2.0
2,721,508 + CCNA_02570 0.15 +1.2
2,721,508 + CCNA_02570 0.15 -1.7
2,721,516 - CCNA_02570 0.16 -0.6
2,721,516 - CCNA_02570 0.16 -0.4
2,721,516 - CCNA_02570 0.16 -0.8
2,721,516 - CCNA_02570 0.16 -0.2
2,721,516 - CCNA_02570 0.16 +0.9
2,721,516 - CCNA_02570 0.16 -0.4
2,721,516 - CCNA_02570 0.16 +0.7
2,721,516 - CCNA_02570 0.16 +0.3
2,721,516 - CCNA_02570 0.16 -1.6
2,721,518 + CCNA_02570 0.16 -0.1
2,721,526 - CCNA_02570 0.17 -1.9
2,721,526 - CCNA_02570 0.17 -0.6
2,721,526 - CCNA_02570 0.17 +2.7
2,721,600 + CCNA_02570 0.22 +1.3
2,721,600 + CCNA_02570 0.22 -0.1
2,721,608 - CCNA_02570 0.23 -0.3
2,721,608 - CCNA_02570 0.23 -0.1
2,721,608 - CCNA_02570 0.23 -1.5
2,721,610 + CCNA_02570 0.23 -1.8
2,721,668 - CCNA_02570 0.27 +0.3
2,721,697 - CCNA_02570 0.29 -0.0
2,721,711 + CCNA_02570 0.30 -1.0
2,721,719 - CCNA_02570 0.31 -0.6
2,721,778 - CCNA_02570 0.35 -1.8
2,721,788 - CCNA_02570 0.36 +0.7
2,721,816 - CCNA_02570 0.38 +1.2
2,721,868 - CCNA_02570 0.42 +0.5
2,721,949 + CCNA_02570 0.48 -0.8
2,722,028 + CCNA_02570 0.54 -2.1
2,722,044 + CCNA_02570 0.55 +0.5
2,722,086 + CCNA_02570 0.59 -1.2
2,722,170 + CCNA_02570 0.65 -0.1
2,722,170 + CCNA_02570 0.65 +0.6
2,722,197 + CCNA_02570 0.67 +2.0

Or see this region's nucleotide sequence