Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02568 and CCNA_02569 are separated by 322 nucleotides CCNA_02569 and CCNA_02570 are separated by 107 nucleotides
CCNA_02568: CCNA_02568 - LAO/AO transport system kinase, at 2,719,265 to 2,720,245
_02568
CCNA_02569: CCNA_02569 - glutathione S-transferase, at 2,720,568 to 2,721,197
_02569
CCNA_02570: CCNA_02570 - major facilitator superfamily transporter, at 2,721,305 to 2,722,639
_02570
Position (kb)
2720
2721
2722 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2719.568 kb on - strand, within CCNA_02568 at 2719.597 kb on - strand, within CCNA_02568 at 2719.597 kb on - strand, within CCNA_02568 at 2719.597 kb on - strand, within CCNA_02568 at 2719.602 kb on - strand, within CCNA_02568 at 2719.602 kb on - strand, within CCNA_02568 at 2719.607 kb on - strand, within CCNA_02568 at 2719.624 kb on + strand, within CCNA_02568 at 2719.651 kb on - strand, within CCNA_02568 at 2719.656 kb on - strand, within CCNA_02568 at 2719.674 kb on + strand, within CCNA_02568 at 2719.717 kb on + strand, within CCNA_02568 at 2719.749 kb on - strand, within CCNA_02568 at 2719.781 kb on + strand, within CCNA_02568 at 2719.794 kb on - strand, within CCNA_02568 at 2719.810 kb on + strand, within CCNA_02568 at 2719.824 kb on + strand, within CCNA_02568 at 2719.832 kb on - strand, within CCNA_02568 at 2719.875 kb on - strand, within CCNA_02568 at 2719.882 kb on + strand, within CCNA_02568 at 2719.890 kb on - strand, within CCNA_02568 at 2719.890 kb on - strand, within CCNA_02568 at 2719.922 kb on + strand, within CCNA_02568 at 2719.924 kb on + strand, within CCNA_02568 at 2719.959 kb on + strand, within CCNA_02568 at 2719.961 kb on - strand, within CCNA_02568 at 2719.988 kb on + strand, within CCNA_02568 at 2720.001 kb on - strand, within CCNA_02568 at 2720.013 kb on + strand, within CCNA_02568 at 2720.075 kb on + strand, within CCNA_02568 at 2720.136 kb on - strand, within CCNA_02568 at 2720.246 kb on + strand at 2720.254 kb on - strand at 2720.256 kb on - strand at 2720.258 kb on + strand at 2720.259 kb on - strand at 2720.267 kb on - strand at 2720.271 kb on + strand at 2720.309 kb on - strand at 2720.346 kb on - strand at 2720.360 kb on + strand at 2720.383 kb on - strand at 2720.394 kb on + strand at 2720.407 kb on - strand at 2720.407 kb on - strand at 2720.428 kb on + strand at 2720.428 kb on + strand at 2720.430 kb on + strand at 2720.436 kb on - strand at 2720.436 kb on - strand at 2720.438 kb on - strand at 2720.438 kb on - strand at 2720.438 kb on - strand at 2720.453 kb on + strand at 2720.492 kb on - strand at 2720.495 kb on + strand at 2720.501 kb on + strand at 2720.546 kb on + strand at 2720.611 kb on - strand at 2720.629 kb on + strand at 2720.634 kb on + strand, within CCNA_02569 at 2720.634 kb on + strand, within CCNA_02569 at 2720.637 kb on - strand, within CCNA_02569 at 2720.642 kb on - strand, within CCNA_02569 at 2720.642 kb on - strand, within CCNA_02569 at 2720.642 kb on - strand, within CCNA_02569 at 2720.675 kb on + strand, within CCNA_02569 at 2720.683 kb on + strand, within CCNA_02569 at 2720.683 kb on - strand, within CCNA_02569 at 2720.685 kb on - strand, within CCNA_02569 at 2720.691 kb on - strand, within CCNA_02569 at 2720.691 kb on - strand, within CCNA_02569 at 2720.714 kb on - strand, within CCNA_02569 at 2720.744 kb on + strand, within CCNA_02569 at 2720.776 kb on + strand, within CCNA_02569 at 2720.800 kb on + strand, within CCNA_02569 at 2720.813 kb on - strand, within CCNA_02569 at 2720.815 kb on + strand, within CCNA_02569 at 2720.825 kb on + strand, within CCNA_02569 at 2720.833 kb on - strand, within CCNA_02569 at 2720.855 kb on - strand, within CCNA_02569 at 2720.895 kb on - strand, within CCNA_02569 at 2720.944 kb on + strand, within CCNA_02569 at 2720.944 kb on + strand, within CCNA_02569 at 2720.990 kb on + strand, within CCNA_02569 at 2721.108 kb on - strand, within CCNA_02569 at 2721.214 kb on - strand at 2721.285 kb on - strand at 2721.354 kb on - strand at 2721.363 kb on + strand at 2721.379 kb on - strand at 2721.431 kb on - strand at 2721.465 kb on - strand, within CCNA_02570 at 2721.491 kb on + strand, within CCNA_02570 at 2721.499 kb on - strand, within CCNA_02570 at 2721.499 kb on - strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.508 kb on + strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.516 kb on - strand, within CCNA_02570 at 2721.518 kb on + strand, within CCNA_02570 at 2721.526 kb on - strand, within CCNA_02570 at 2721.526 kb on - strand, within CCNA_02570 at 2721.526 kb on - strand, within CCNA_02570 at 2721.600 kb on + strand, within CCNA_02570 at 2721.600 kb on + strand, within CCNA_02570 at 2721.608 kb on - strand, within CCNA_02570 at 2721.608 kb on - strand, within CCNA_02570 at 2721.608 kb on - strand, within CCNA_02570 at 2721.610 kb on + strand, within CCNA_02570 at 2721.668 kb on - strand, within CCNA_02570 at 2721.697 kb on - strand, within CCNA_02570 at 2721.711 kb on + strand, within CCNA_02570 at 2721.719 kb on - strand, within CCNA_02570 at 2721.778 kb on - strand, within CCNA_02570 at 2721.788 kb on - strand, within CCNA_02570 at 2721.816 kb on - strand, within CCNA_02570 at 2721.868 kb on - strand, within CCNA_02570 at 2721.949 kb on + strand, within CCNA_02570 at 2722.028 kb on + strand, within CCNA_02570 at 2722.044 kb on + strand, within CCNA_02570 at 2722.086 kb on + strand, within CCNA_02570 at 2722.170 kb on + strand, within CCNA_02570 at 2722.170 kb on + strand, within CCNA_02570 at 2722.197 kb on + strand, within CCNA_02570
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 2,719,568 - CCNA_02568 0.31 -1.1 2,719,597 - CCNA_02568 0.34 -0.6 2,719,597 - CCNA_02568 0.34 -1.0 2,719,597 - CCNA_02568 0.34 -1.8 2,719,602 - CCNA_02568 0.34 -0.9 2,719,602 - CCNA_02568 0.34 -1.4 2,719,607 - CCNA_02568 0.35 +0.9 2,719,624 + CCNA_02568 0.37 +0.7 2,719,651 - CCNA_02568 0.39 -0.3 2,719,656 - CCNA_02568 0.40 -0.1 2,719,674 + CCNA_02568 0.42 -1.1 2,719,717 + CCNA_02568 0.46 +0.9 2,719,749 - CCNA_02568 0.49 -0.3 2,719,781 + CCNA_02568 0.53 -0.1 2,719,794 - CCNA_02568 0.54 -0.4 2,719,810 + CCNA_02568 0.56 -2.4 2,719,824 + CCNA_02568 0.57 +1.6 2,719,832 - CCNA_02568 0.58 -0.3 2,719,875 - CCNA_02568 0.62 -1.1 2,719,882 + CCNA_02568 0.63 -2.4 2,719,890 - CCNA_02568 0.64 -1.3 2,719,890 - CCNA_02568 0.64 +0.4 2,719,922 + CCNA_02568 0.67 -1.4 2,719,924 + CCNA_02568 0.67 +0.6 2,719,959 + CCNA_02568 0.71 +0.5 2,719,961 - CCNA_02568 0.71 +0.6 2,719,988 + CCNA_02568 0.74 -0.1 2,720,001 - CCNA_02568 0.75 -0.7 2,720,013 + CCNA_02568 0.76 +0.7 2,720,075 + CCNA_02568 0.83 +0.8 2,720,136 - CCNA_02568 0.89 +1.1 2,720,246 + +0.1 2,720,254 - -0.8 2,720,256 - +1.0 2,720,258 + +0.4 2,720,259 - -0.3 2,720,267 - -0.4 2,720,271 + -2.7 2,720,309 - -0.1 2,720,346 - -0.4 2,720,360 + +0.4 2,720,383 - +0.3 2,720,394 + +1.9 2,720,407 - -0.3 2,720,407 - +1.6 2,720,428 + -0.0 2,720,428 + +0.5 2,720,430 + -0.8 2,720,436 - +0.1 2,720,436 - +1.1 2,720,438 - +2.1 2,720,438 - +0.3 2,720,438 - -0.5 2,720,453 + +1.5 2,720,492 - +0.1 2,720,495 + +2.8 2,720,501 + +0.0 2,720,546 + +1.9 2,720,611 - -1.4 2,720,629 + +0.0 2,720,634 + CCNA_02569 0.10 -0.6 2,720,634 + CCNA_02569 0.10 +1.9 2,720,637 - CCNA_02569 0.11 -2.6 2,720,642 - CCNA_02569 0.12 -3.4 2,720,642 - CCNA_02569 0.12 -2.0 2,720,642 - CCNA_02569 0.12 -2.7 2,720,675 + CCNA_02569 0.17 -0.5 2,720,683 + CCNA_02569 0.18 +0.5 2,720,683 - CCNA_02569 0.18 +1.1 2,720,685 - CCNA_02569 0.19 -0.5 2,720,691 - CCNA_02569 0.20 -1.6 2,720,691 - CCNA_02569 0.20 -1.0 2,720,714 - CCNA_02569 0.23 -2.3 2,720,744 + CCNA_02569 0.28 -1.1 2,720,776 + CCNA_02569 0.33 -0.9 2,720,800 + CCNA_02569 0.37 -1.4 2,720,813 - CCNA_02569 0.39 -0.8 2,720,815 + CCNA_02569 0.39 -2.0 2,720,825 + CCNA_02569 0.41 +0.4 2,720,833 - CCNA_02569 0.42 -2.1 2,720,855 - CCNA_02569 0.46 -0.8 2,720,895 - CCNA_02569 0.52 -0.3 2,720,944 + CCNA_02569 0.60 -1.1 2,720,944 + CCNA_02569 0.60 -1.6 2,720,990 + CCNA_02569 0.67 -0.1 2,721,108 - CCNA_02569 0.86 +1.9 2,721,214 - +0.3 2,721,285 - -0.9 2,721,354 - -0.5 2,721,363 + +0.6 2,721,379 - +1.4 2,721,431 - -1.0 2,721,465 - CCNA_02570 0.12 -0.7 2,721,491 + CCNA_02570 0.14 +0.6 2,721,499 - CCNA_02570 0.15 -0.4 2,721,499 - CCNA_02570 0.15 -0.1 2,721,508 + CCNA_02570 0.15 -0.4 2,721,508 + CCNA_02570 0.15 +0.6 2,721,508 + CCNA_02570 0.15 -0.3 2,721,508 + CCNA_02570 0.15 -1.0 2,721,508 + CCNA_02570 0.15 +0.8 2,721,508 + CCNA_02570 0.15 -1.1 2,721,508 + CCNA_02570 0.15 -0.5 2,721,508 + CCNA_02570 0.15 +0.1 2,721,508 + CCNA_02570 0.15 +1.1 2,721,508 + CCNA_02570 0.15 +0.2 2,721,508 + CCNA_02570 0.15 +2.0 2,721,508 + CCNA_02570 0.15 +1.2 2,721,508 + CCNA_02570 0.15 -1.7 2,721,516 - CCNA_02570 0.16 -0.6 2,721,516 - CCNA_02570 0.16 -0.4 2,721,516 - CCNA_02570 0.16 -0.8 2,721,516 - CCNA_02570 0.16 -0.2 2,721,516 - CCNA_02570 0.16 +0.9 2,721,516 - CCNA_02570 0.16 -0.4 2,721,516 - CCNA_02570 0.16 +0.7 2,721,516 - CCNA_02570 0.16 +0.3 2,721,516 - CCNA_02570 0.16 -1.6 2,721,518 + CCNA_02570 0.16 -0.1 2,721,526 - CCNA_02570 0.17 -1.9 2,721,526 - CCNA_02570 0.17 -0.6 2,721,526 - CCNA_02570 0.17 +2.7 2,721,600 + CCNA_02570 0.22 +1.3 2,721,600 + CCNA_02570 0.22 -0.1 2,721,608 - CCNA_02570 0.23 -0.3 2,721,608 - CCNA_02570 0.23 -0.1 2,721,608 - CCNA_02570 0.23 -1.5 2,721,610 + CCNA_02570 0.23 -1.8 2,721,668 - CCNA_02570 0.27 +0.3 2,721,697 - CCNA_02570 0.29 -0.0 2,721,711 + CCNA_02570 0.30 -1.0 2,721,719 - CCNA_02570 0.31 -0.6 2,721,778 - CCNA_02570 0.35 -1.8 2,721,788 - CCNA_02570 0.36 +0.7 2,721,816 - CCNA_02570 0.38 +1.2 2,721,868 - CCNA_02570 0.42 +0.5 2,721,949 + CCNA_02570 0.48 -0.8 2,722,028 + CCNA_02570 0.54 -2.1 2,722,044 + CCNA_02570 0.55 +0.5 2,722,086 + CCNA_02570 0.59 -1.2 2,722,170 + CCNA_02570 0.65 -0.1 2,722,170 + CCNA_02570 0.65 +0.6 2,722,197 + CCNA_02570 0.67 +2.0
Or see this region's nucleotide sequence