Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02301

Experiment: Adenosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02299 and CCNA_02300 overlap by 4 nucleotidesCCNA_02300 and CCNA_02301 overlap by 4 nucleotidesCCNA_02301 and CCNA_02302 overlap by 4 nucleotidesCCNA_02302 and CCNA_02303 overlap by 4 nucleotides CCNA_02299: CCNA_02299 - cell division ATP-binding protein FtsE, at 2,445,821 to 2,446,528 _02299 CCNA_02300: CCNA_02300 - cell division protein FtsX, at 2,446,525 to 2,447,418 _02300 CCNA_02301: CCNA_02301 - YdcF-like family protein, at 2,447,415 to 2,448,032 _02301 CCNA_02302: CCNA_02302 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,448,029 to 2,448,739 _02302 CCNA_02303: CCNA_02303 - cation transport protein chaC, at 2,448,736 to 2,449,281 _02303 Position (kb) 2447 2448 2449Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2446.422 kb on + strand, within CCNA_02299at 2446.422 kb on + strand, within CCNA_02299at 2446.461 kb on - strandat 2446.511 kb on - strandat 2446.688 kb on - strand, within CCNA_02300at 2446.864 kb on + strand, within CCNA_02300at 2447.140 kb on + strand, within CCNA_02300at 2447.174 kb on + strand, within CCNA_02300at 2447.318 kb on - strand, within CCNA_02300at 2447.415 kb on + strandat 2447.457 kb on + strandat 2447.538 kb on - strand, within CCNA_02301at 2447.551 kb on + strand, within CCNA_02301at 2447.559 kb on - strand, within CCNA_02301at 2447.594 kb on + strand, within CCNA_02301at 2447.601 kb on + strand, within CCNA_02301at 2447.601 kb on + strand, within CCNA_02301at 2447.601 kb on + strand, within CCNA_02301at 2447.609 kb on - strand, within CCNA_02301at 2447.645 kb on + strand, within CCNA_02301at 2447.647 kb on - strand, within CCNA_02301at 2447.682 kb on + strand, within CCNA_02301at 2447.695 kb on + strand, within CCNA_02301at 2447.700 kb on + strand, within CCNA_02301at 2447.700 kb on + strand, within CCNA_02301at 2447.724 kb on + strand, within CCNA_02301at 2447.757 kb on + strand, within CCNA_02301at 2447.759 kb on - strand, within CCNA_02301at 2447.762 kb on + strand, within CCNA_02301at 2447.762 kb on + strand, within CCNA_02301at 2447.769 kb on + strand, within CCNA_02301at 2447.769 kb on + strand, within CCNA_02301at 2447.770 kb on - strand, within CCNA_02301at 2447.777 kb on - strand, within CCNA_02301at 2447.781 kb on - strand, within CCNA_02301at 2447.846 kb on - strand, within CCNA_02301at 2447.856 kb on - strand, within CCNA_02301at 2447.870 kb on + strand, within CCNA_02301at 2447.940 kb on - strand, within CCNA_02301at 2447.941 kb on + strand, within CCNA_02301at 2448.733 kb on + strandat 2448.741 kb on - strandat 2448.790 kb on - strandat 2448.797 kb on - strand, within CCNA_02303at 2448.797 kb on - strand, within CCNA_02303at 2448.859 kb on - strand, within CCNA_02303at 2449.029 kb on + strand, within CCNA_02303

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (N)
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2,446,422 + CCNA_02299 0.85 +1.0
2,446,422 + CCNA_02299 0.85 -0.7
2,446,461 - +0.4
2,446,511 - -0.4
2,446,688 - CCNA_02300 0.18 -0.0
2,446,864 + CCNA_02300 0.38 -0.7
2,447,140 + CCNA_02300 0.69 +1.0
2,447,174 + CCNA_02300 0.73 -1.9
2,447,318 - CCNA_02300 0.89 -0.3
2,447,415 + -1.4
2,447,457 + -1.6
2,447,538 - CCNA_02301 0.20 +0.3
2,447,551 + CCNA_02301 0.22 -0.0
2,447,559 - CCNA_02301 0.23 -0.8
2,447,594 + CCNA_02301 0.29 -0.6
2,447,601 + CCNA_02301 0.30 -0.6
2,447,601 + CCNA_02301 0.30 +0.3
2,447,601 + CCNA_02301 0.30 +1.1
2,447,609 - CCNA_02301 0.31 -0.2
2,447,645 + CCNA_02301 0.37 +0.2
2,447,647 - CCNA_02301 0.38 -0.0
2,447,682 + CCNA_02301 0.43 -3.1
2,447,695 + CCNA_02301 0.45 -2.8
2,447,700 + CCNA_02301 0.46 -1.9
2,447,700 + CCNA_02301 0.46 -1.3
2,447,724 + CCNA_02301 0.50 -1.7
2,447,757 + CCNA_02301 0.55 -1.9
2,447,759 - CCNA_02301 0.56 -0.9
2,447,762 + CCNA_02301 0.56 -0.7
2,447,762 + CCNA_02301 0.56 -1.4
2,447,769 + CCNA_02301 0.57 -0.3
2,447,769 + CCNA_02301 0.57 -2.1
2,447,770 - CCNA_02301 0.57 -0.2
2,447,777 - CCNA_02301 0.59 -0.3
2,447,781 - CCNA_02301 0.59 -1.9
2,447,846 - CCNA_02301 0.70 -2.9
2,447,856 - CCNA_02301 0.71 -1.0
2,447,870 + CCNA_02301 0.74 -1.1
2,447,940 - CCNA_02301 0.85 -0.4
2,447,941 + CCNA_02301 0.85 +0.3
2,448,733 + -0.4
2,448,741 - +2.0
2,448,790 - -1.3
2,448,797 - CCNA_02303 0.11 +1.3
2,448,797 - CCNA_02303 0.11 +0.1
2,448,859 - CCNA_02303 0.23 +0.8
2,449,029 + CCNA_02303 0.54 +1.0

Or see this region's nucleotide sequence