Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02209 and CCNA_02210 are separated by 101 nucleotides CCNA_02210 and CCNA_02211 are separated by 91 nucleotides
CCNA_02209: CCNA_02209 - quinone oxidoreductase, at 2,356,825 to 2,357,847
_02209
CCNA_02210: CCNA_02210 - dihydrofolate reductase, at 2,357,949 to 2,358,464
_02210
CCNA_02211: CCNA_02211 - zinc ribbon domain protein, at 2,358,556 to 2,359,698
_02211
Position (kb)
2357
2358
2359 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2356.956 kb on - strand, within CCNA_02209 at 2356.978 kb on + strand, within CCNA_02209 at 2356.987 kb on - strand, within CCNA_02209 at 2356.996 kb on + strand, within CCNA_02209 at 2357.004 kb on + strand, within CCNA_02209 at 2357.011 kb on + strand, within CCNA_02209 at 2357.019 kb on - strand, within CCNA_02209 at 2357.025 kb on + strand, within CCNA_02209 at 2357.036 kb on + strand, within CCNA_02209 at 2357.036 kb on + strand, within CCNA_02209 at 2357.036 kb on + strand, within CCNA_02209 at 2357.044 kb on + strand, within CCNA_02209 at 2357.044 kb on - strand, within CCNA_02209 at 2357.044 kb on - strand, within CCNA_02209 at 2357.063 kb on - strand, within CCNA_02209 at 2357.171 kb on + strand, within CCNA_02209 at 2357.180 kb on + strand, within CCNA_02209 at 2357.180 kb on + strand, within CCNA_02209 at 2357.180 kb on + strand, within CCNA_02209 at 2357.180 kb on + strand, within CCNA_02209 at 2357.180 kb on + strand, within CCNA_02209 at 2357.188 kb on - strand, within CCNA_02209 at 2357.188 kb on - strand, within CCNA_02209 at 2357.188 kb on - strand, within CCNA_02209 at 2357.188 kb on - strand, within CCNA_02209 at 2357.291 kb on + strand, within CCNA_02209 at 2357.297 kb on + strand, within CCNA_02209 at 2357.303 kb on + strand, within CCNA_02209 at 2357.305 kb on - strand, within CCNA_02209 at 2357.320 kb on + strand, within CCNA_02209 at 2357.328 kb on - strand, within CCNA_02209 at 2357.462 kb on - strand, within CCNA_02209 at 2357.478 kb on - strand, within CCNA_02209 at 2357.485 kb on + strand, within CCNA_02209 at 2357.491 kb on + strand, within CCNA_02209 at 2357.492 kb on + strand, within CCNA_02209 at 2357.493 kb on - strand, within CCNA_02209 at 2357.540 kb on + strand, within CCNA_02209 at 2357.571 kb on + strand, within CCNA_02209 at 2357.598 kb on + strand, within CCNA_02209 at 2357.606 kb on - strand, within CCNA_02209 at 2357.606 kb on - strand, within CCNA_02209 at 2357.628 kb on - strand, within CCNA_02209 at 2357.706 kb on - strand, within CCNA_02209 at 2357.786 kb on + strand at 2357.796 kb on + strand at 2357.804 kb on - strand at 2357.804 kb on - strand at 2357.804 kb on - strand at 2357.823 kb on - strand at 2357.828 kb on - strand at 2357.837 kb on + strand at 2357.837 kb on + strand at 2357.845 kb on - strand at 2357.918 kb on + strand at 2357.918 kb on + strand at 2357.918 kb on + strand at 2357.918 kb on + strand at 2357.923 kb on - strand at 2357.923 kb on - strand at 2357.938 kb on + strand at 2358.458 kb on + strand at 2358.497 kb on + strand at 2358.534 kb on + strand at 2358.664 kb on + strand at 2358.734 kb on + strand, within CCNA_02211 at 2358.739 kb on - strand, within CCNA_02211 at 2358.741 kb on - strand, within CCNA_02211 at 2358.742 kb on - strand, within CCNA_02211 at 2358.764 kb on + strand, within CCNA_02211 at 2358.766 kb on + strand, within CCNA_02211 at 2358.766 kb on + strand, within CCNA_02211 at 2358.766 kb on + strand, within CCNA_02211 at 2358.766 kb on + strand, within CCNA_02211 at 2358.772 kb on - strand, within CCNA_02211 at 2358.772 kb on - strand, within CCNA_02211 at 2358.794 kb on - strand, within CCNA_02211 at 2358.833 kb on + strand, within CCNA_02211 at 2358.868 kb on + strand, within CCNA_02211 at 2358.870 kb on - strand, within CCNA_02211 at 2358.936 kb on + strand, within CCNA_02211 at 2358.943 kb on + strand, within CCNA_02211 at 2358.982 kb on + strand, within CCNA_02211 at 2359.014 kb on - strand, within CCNA_02211 at 2359.029 kb on + strand, within CCNA_02211 at 2359.084 kb on + strand, within CCNA_02211 at 2359.114 kb on - strand, within CCNA_02211 at 2359.126 kb on + strand, within CCNA_02211 at 2359.143 kb on + strand, within CCNA_02211 at 2359.143 kb on + strand, within CCNA_02211 at 2359.145 kb on - strand, within CCNA_02211 at 2359.161 kb on + strand, within CCNA_02211 at 2359.174 kb on + strand, within CCNA_02211 at 2359.200 kb on + strand, within CCNA_02211 at 2359.438 kb on + strand, within CCNA_02211
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 2,356,956 - CCNA_02209 0.13 -0.0 2,356,978 + CCNA_02209 0.15 -0.5 2,356,987 - CCNA_02209 0.16 -1.1 2,356,996 + CCNA_02209 0.17 -1.1 2,357,004 + CCNA_02209 0.17 +1.0 2,357,011 + CCNA_02209 0.18 +1.0 2,357,019 - CCNA_02209 0.19 -1.1 2,357,025 + CCNA_02209 0.20 +1.2 2,357,036 + CCNA_02209 0.21 -0.4 2,357,036 + CCNA_02209 0.21 +0.0 2,357,036 + CCNA_02209 0.21 -0.1 2,357,044 + CCNA_02209 0.21 -0.9 2,357,044 - CCNA_02209 0.21 +0.5 2,357,044 - CCNA_02209 0.21 +0.3 2,357,063 - CCNA_02209 0.23 -0.5 2,357,171 + CCNA_02209 0.34 +0.3 2,357,180 + CCNA_02209 0.35 +0.7 2,357,180 + CCNA_02209 0.35 +1.1 2,357,180 + CCNA_02209 0.35 -1.4 2,357,180 + CCNA_02209 0.35 -1.4 2,357,180 + CCNA_02209 0.35 +0.8 2,357,188 - CCNA_02209 0.35 -1.0 2,357,188 - CCNA_02209 0.35 +1.1 2,357,188 - CCNA_02209 0.35 +0.2 2,357,188 - CCNA_02209 0.35 -0.2 2,357,291 + CCNA_02209 0.46 +0.2 2,357,297 + CCNA_02209 0.46 +1.0 2,357,303 + CCNA_02209 0.47 +0.5 2,357,305 - CCNA_02209 0.47 +1.3 2,357,320 + CCNA_02209 0.48 -0.7 2,357,328 - CCNA_02209 0.49 -1.2 2,357,462 - CCNA_02209 0.62 -2.0 2,357,478 - CCNA_02209 0.64 -1.1 2,357,485 + CCNA_02209 0.65 +0.7 2,357,491 + CCNA_02209 0.65 -0.6 2,357,492 + CCNA_02209 0.65 +0.9 2,357,493 - CCNA_02209 0.65 +0.5 2,357,540 + CCNA_02209 0.70 -0.2 2,357,571 + CCNA_02209 0.73 -1.8 2,357,598 + CCNA_02209 0.76 +3.3 2,357,606 - CCNA_02209 0.76 -1.8 2,357,606 - CCNA_02209 0.76 -1.6 2,357,628 - CCNA_02209 0.78 +1.7 2,357,706 - CCNA_02209 0.86 +1.5 2,357,786 + -1.7 2,357,796 + -0.5 2,357,804 - +0.9 2,357,804 - -0.9 2,357,804 - -1.7 2,357,823 - -1.3 2,357,828 - -1.9 2,357,837 + -1.1 2,357,837 + -0.6 2,357,845 - +0.9 2,357,918 + +0.7 2,357,918 + +0.8 2,357,918 + +1.6 2,357,918 + +0.6 2,357,923 - -2.6 2,357,923 - -0.8 2,357,938 + -2.2 2,358,458 + -1.4 2,358,497 + -0.7 2,358,534 + -1.2 2,358,664 + +0.4 2,358,734 + CCNA_02211 0.16 +0.4 2,358,739 - CCNA_02211 0.16 +0.2 2,358,741 - CCNA_02211 0.16 +0.9 2,358,742 - CCNA_02211 0.16 -1.2 2,358,764 + CCNA_02211 0.18 +1.7 2,358,766 + CCNA_02211 0.18 +1.6 2,358,766 + CCNA_02211 0.18 -0.4 2,358,766 + CCNA_02211 0.18 +1.6 2,358,766 + CCNA_02211 0.18 -0.4 2,358,772 - CCNA_02211 0.19 -0.1 2,358,772 - CCNA_02211 0.19 -0.5 2,358,794 - CCNA_02211 0.21 +0.3 2,358,833 + CCNA_02211 0.24 -1.7 2,358,868 + CCNA_02211 0.27 -0.7 2,358,870 - CCNA_02211 0.27 +0.7 2,358,936 + CCNA_02211 0.33 +0.4 2,358,943 + CCNA_02211 0.34 -1.3 2,358,982 + CCNA_02211 0.37 +0.5 2,359,014 - CCNA_02211 0.40 -3.0 2,359,029 + CCNA_02211 0.41 -0.6 2,359,084 + CCNA_02211 0.46 +1.5 2,359,114 - CCNA_02211 0.49 -1.2 2,359,126 + CCNA_02211 0.50 +0.1 2,359,143 + CCNA_02211 0.51 +1.7 2,359,143 + CCNA_02211 0.51 +0.3 2,359,145 - CCNA_02211 0.52 +0.6 2,359,161 + CCNA_02211 0.53 +1.8 2,359,174 + CCNA_02211 0.54 +2.0 2,359,200 + CCNA_02211 0.56 +0.7 2,359,438 + CCNA_02211 0.77 +1.1
Or see this region's nucleotide sequence