Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_00013 and CCNA_00014 overlap by 4 nucleotides CCNA_00014 and CCNA_00015 overlap by 4 nucleotides CCNA_00015 and CCNA_00016 are separated by 0 nucleotides CCNA_00016 and CCNA_00017 overlap by 4 nucleotides
CCNA_00013: CCNA_00013 - protein-PII uridylyltransferase, at 14,199 to 17,021
_00013
CCNA_00014: CCNA_00014 - molybdenum cofactor biosynthesis protein C, at 17,018 to 17,494
_00014
CCNA_00015: CCNA_00015 - molybdenum cofactor biosynthesis protein B, at 17,491 to 18,042
_00015
CCNA_00016: CCNA_00016 - molybdopterin converting factor, large subunit, at 18,043 to 18,495
_00016
CCNA_00017: CCNA_00017 - molybdopterin converting factor, small subunit, at 18,492 to 18,731
_00017
Position (kb)
17
18 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 16.039 kb on - strand, within CCNA_00013 at 16.063 kb on - strand, within CCNA_00013 at 16.081 kb on - strand, within CCNA_00013 at 16.087 kb on + strand, within CCNA_00013 at 16.095 kb on - strand, within CCNA_00013 at 16.141 kb on - strand, within CCNA_00013 at 16.246 kb on - strand, within CCNA_00013 at 16.281 kb on + strand, within CCNA_00013 at 16.336 kb on - strand, within CCNA_00013 at 16.420 kb on - strand, within CCNA_00013 at 16.492 kb on + strand, within CCNA_00013 at 16.492 kb on + strand, within CCNA_00013 at 16.500 kb on - strand, within CCNA_00013 at 16.500 kb on - strand, within CCNA_00013 at 16.510 kb on - strand, within CCNA_00013 at 16.571 kb on - strand, within CCNA_00013 at 16.660 kb on + strand, within CCNA_00013 at 16.660 kb on + strand, within CCNA_00013 at 16.668 kb on - strand, within CCNA_00013 at 16.668 kb on - strand, within CCNA_00013 at 16.757 kb on - strand at 16.787 kb on + strand at 16.787 kb on + strand at 16.787 kb on + strand at 16.787 kb on + strand at 16.787 kb on + strand at 16.795 kb on - strand at 16.795 kb on - strand at 16.872 kb on - strand at 16.922 kb on + strand at 16.955 kb on + strand at 16.964 kb on - strand at 16.994 kb on - strand at 17.011 kb on - strand at 17.016 kb on + strand at 17.016 kb on + strand at 17.024 kb on - strand at 17.087 kb on - strand, within CCNA_00014 at 17.106 kb on + strand, within CCNA_00014 at 17.114 kb on - strand, within CCNA_00014 at 17.114 kb on - strand, within CCNA_00014 at 17.117 kb on + strand, within CCNA_00014 at 17.143 kb on - strand, within CCNA_00014 at 17.187 kb on + strand, within CCNA_00014 at 17.187 kb on + strand, within CCNA_00014 at 17.187 kb on + strand, within CCNA_00014 at 17.187 kb on + strand, within CCNA_00014 at 17.195 kb on - strand, within CCNA_00014 at 17.195 kb on - strand, within CCNA_00014 at 17.195 kb on - strand, within CCNA_00014 at 17.195 kb on - strand, within CCNA_00014 at 17.195 kb on - strand at 17.244 kb on + strand, within CCNA_00014 at 17.244 kb on + strand, within CCNA_00014 at 17.244 kb on + strand, within CCNA_00014 at 17.244 kb on + strand, within CCNA_00014 at 17.244 kb on + strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.252 kb on - strand, within CCNA_00014 at 17.263 kb on - strand, within CCNA_00014 at 17.270 kb on - strand, within CCNA_00014 at 17.281 kb on + strand, within CCNA_00014 at 17.289 kb on - strand, within CCNA_00014 at 17.328 kb on + strand, within CCNA_00014 at 17.377 kb on - strand, within CCNA_00014 at 17.413 kb on + strand, within CCNA_00014 at 17.424 kb on + strand, within CCNA_00014 at 17.449 kb on - strand at 17.462 kb on + strand at 17.525 kb on + strand at 17.567 kb on + strand, within CCNA_00015 at 17.569 kb on - strand, within CCNA_00015 at 17.580 kb on - strand, within CCNA_00015 at 17.584 kb on - strand, within CCNA_00015 at 17.694 kb on + strand, within CCNA_00015 at 17.760 kb on + strand, within CCNA_00015 at 17.760 kb on + strand, within CCNA_00015 at 17.830 kb on - strand, within CCNA_00015 at 17.840 kb on + strand, within CCNA_00015 at 17.840 kb on + strand, within CCNA_00015 at 17.843 kb on - strand, within CCNA_00015 at 17.848 kb on - strand, within CCNA_00015 at 17.848 kb on - strand, within CCNA_00015 at 17.848 kb on - strand, within CCNA_00015 at 17.886 kb on + strand, within CCNA_00015 at 17.886 kb on + strand, within CCNA_00015 at 17.886 kb on + strand, within CCNA_00015 at 17.900 kb on + strand, within CCNA_00015 at 17.900 kb on + strand, within CCNA_00015 at 17.908 kb on - strand, within CCNA_00015 at 17.908 kb on - strand, within CCNA_00015 at 17.908 kb on - strand, within CCNA_00015 at 17.923 kb on - strand, within CCNA_00015 at 17.923 kb on - strand, within CCNA_00015 at 17.923 kb on - strand, within CCNA_00015 at 17.931 kb on + strand, within CCNA_00015 at 17.966 kb on - strand, within CCNA_00015 at 17.973 kb on - strand, within CCNA_00015 at 17.981 kb on - strand, within CCNA_00015 at 17.987 kb on + strand at 17.987 kb on + strand at 17.995 kb on - strand at 18.000 kb on + strand at 18.009 kb on - strand at 18.013 kb on - strand at 18.023 kb on + strand at 18.031 kb on - strand at 18.048 kb on - strand at 18.059 kb on - strand at 18.082 kb on - strand at 18.082 kb on - strand at 18.087 kb on - strand at 18.101 kb on - strand, within CCNA_00016 at 18.110 kb on - strand, within CCNA_00016 at 18.148 kb on + strand, within CCNA_00016 at 18.148 kb on + strand, within CCNA_00016 at 18.150 kb on + strand, within CCNA_00016 at 18.150 kb on + strand, within CCNA_00016 at 18.178 kb on + strand, within CCNA_00016 at 18.188 kb on - strand, within CCNA_00016 at 18.290 kb on - strand, within CCNA_00016 at 18.367 kb on + strand, within CCNA_00016 at 18.378 kb on + strand, within CCNA_00016 at 18.381 kb on - strand, within CCNA_00016 at 18.383 kb on + strand, within CCNA_00016 at 18.443 kb on + strand, within CCNA_00016 at 18.461 kb on + strand at 18.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 16,039 - CCNA_00013 0.65 -1.0 16,063 - CCNA_00013 0.66 -0.1 16,081 - CCNA_00013 0.67 -0.7 16,087 + CCNA_00013 0.67 +2.4 16,095 - CCNA_00013 0.67 +3.6 16,141 - CCNA_00013 0.69 -1.0 16,246 - CCNA_00013 0.73 -0.9 16,281 + CCNA_00013 0.74 -0.5 16,336 - CCNA_00013 0.76 +0.6 16,420 - CCNA_00013 0.79 +0.3 16,492 + CCNA_00013 0.81 -0.9 16,492 + CCNA_00013 0.81 -0.3 16,500 - CCNA_00013 0.82 -0.9 16,500 - CCNA_00013 0.82 +0.8 16,510 - CCNA_00013 0.82 +0.9 16,571 - CCNA_00013 0.84 -0.0 16,660 + CCNA_00013 0.87 +0.7 16,660 + CCNA_00013 0.87 +0.3 16,668 - CCNA_00013 0.87 -0.1 16,668 - CCNA_00013 0.87 -0.1 16,757 - -1.1 16,787 + -0.1 16,787 + -0.4 16,787 + +0.9 16,787 + -0.5 16,787 + +1.1 16,795 - -1.1 16,795 - +0.7 16,872 - -1.0 16,922 + +1.7 16,955 + +2.0 16,964 - +1.1 16,994 - +3.7 17,011 - +1.7 17,016 + -0.9 17,016 + -0.3 17,024 - -0.4 17,087 - CCNA_00014 0.14 -0.6 17,106 + CCNA_00014 0.18 -1.1 17,114 - CCNA_00014 0.20 -2.9 17,114 - CCNA_00014 0.20 -0.8 17,117 + CCNA_00014 0.21 -0.8 17,143 - CCNA_00014 0.26 +0.4 17,187 + CCNA_00014 0.35 +2.4 17,187 + CCNA_00014 0.35 -1.1 17,187 + CCNA_00014 0.35 +0.6 17,187 + CCNA_00014 0.35 -2.9 17,195 - CCNA_00014 0.37 -2.3 17,195 - CCNA_00014 0.37 -1.2 17,195 - CCNA_00014 0.37 -3.8 17,195 - CCNA_00014 0.37 -2.0 17,195 - +1.4 17,244 + CCNA_00014 0.47 +0.1 17,244 + CCNA_00014 0.47 -0.9 17,244 + CCNA_00014 0.47 +0.2 17,244 + CCNA_00014 0.47 -0.4 17,244 + CCNA_00014 0.47 -0.1 17,252 - CCNA_00014 0.49 -1.2 17,252 - CCNA_00014 0.49 -0.7 17,252 - CCNA_00014 0.49 -0.8 17,252 - CCNA_00014 0.49 -0.9 17,252 - CCNA_00014 0.49 -0.7 17,252 - CCNA_00014 0.49 -1.8 17,252 - CCNA_00014 0.49 -3.3 17,252 - CCNA_00014 0.49 -2.0 17,252 - CCNA_00014 0.49 -0.7 17,252 - CCNA_00014 0.49 -1.6 17,263 - CCNA_00014 0.51 +0.2 17,270 - CCNA_00014 0.53 -0.9 17,281 + CCNA_00014 0.55 -1.1 17,289 - CCNA_00014 0.57 -2.2 17,328 + CCNA_00014 0.65 -1.5 17,377 - CCNA_00014 0.75 -3.0 17,413 + CCNA_00014 0.83 -2.1 17,424 + CCNA_00014 0.85 -2.6 17,449 - -2.6 17,462 + +1.1 17,525 + -1.1 17,567 + CCNA_00015 0.14 -0.0 17,569 - CCNA_00015 0.14 -2.8 17,580 - CCNA_00015 0.16 -0.4 17,584 - CCNA_00015 0.17 -1.7 17,694 + CCNA_00015 0.37 -1.0 17,760 + CCNA_00015 0.49 -0.1 17,760 + CCNA_00015 0.49 +0.1 17,830 - CCNA_00015 0.61 -1.1 17,840 + CCNA_00015 0.63 -2.4 17,840 + CCNA_00015 0.63 -1.6 17,843 - CCNA_00015 0.64 -3.3 17,848 - CCNA_00015 0.65 -2.5 17,848 - CCNA_00015 0.65 -2.5 17,848 - CCNA_00015 0.65 -2.7 17,886 + CCNA_00015 0.72 -0.8 17,886 + CCNA_00015 0.72 -1.4 17,886 + CCNA_00015 0.72 -0.4 17,900 + CCNA_00015 0.74 +0.2 17,900 + CCNA_00015 0.74 -1.1 17,908 - CCNA_00015 0.76 -1.8 17,908 - CCNA_00015 0.76 -2.3 17,908 - CCNA_00015 0.76 -1.8 17,923 - CCNA_00015 0.78 -2.0 17,923 - CCNA_00015 0.78 -0.8 17,923 - CCNA_00015 0.78 -2.1 17,931 + CCNA_00015 0.80 -3.5 17,966 - CCNA_00015 0.86 -2.0 17,973 - CCNA_00015 0.87 -1.8 17,981 - CCNA_00015 0.89 -1.7 17,987 + +0.0 17,987 + +0.0 17,995 - +0.2 18,000 + -1.8 18,009 - -1.3 18,013 - -1.0 18,023 + -2.7 18,031 - -1.4 18,048 - -1.8 18,059 - +0.1 18,082 - -0.8 18,082 - -2.1 18,087 - -2.1 18,101 - CCNA_00016 0.13 -1.1 18,110 - CCNA_00016 0.15 -1.6 18,148 + CCNA_00016 0.23 -1.8 18,148 + CCNA_00016 0.23 -1.2 18,150 + CCNA_00016 0.24 -1.6 18,150 + CCNA_00016 0.24 -2.2 18,178 + CCNA_00016 0.30 -3.4 18,188 - CCNA_00016 0.32 -0.6 18,290 - CCNA_00016 0.55 -0.7 18,367 + CCNA_00016 0.72 -1.4 18,378 + CCNA_00016 0.74 -0.7 18,381 - CCNA_00016 0.75 -1.6 18,383 + CCNA_00016 0.75 -2.6 18,443 + CCNA_00016 0.88 -0.2 18,461 + +0.2 18,479 - -3.4
Or see this region's nucleotide sequence