Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25450

Experiment: R2A with Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.05 mg/ml
6,177,896	+		CA265_RS25445	0.38	+0.4
6,177,962	-		CA265_RS25445	0.43	+0.5
6,177,985	-		CA265_RS25445	0.45	-0.4
6,178,036	-		CA265_RS25445	0.49	-1.2
6,178,085	+		CA265_RS25445	0.53	+0.9
6,178,085	+		CA265_RS25445	0.53	-0.1
6,178,086	-		CA265_RS25445	0.53	-0.3
6,178,116	-		CA265_RS25445	0.55	-0.5
6,178,220	-		CA265_RS25445	0.64	+0.3
6,178,274	+		CA265_RS25445	0.68	-0.5
6,178,318	-		CA265_RS25445	0.72	-0.0
6,178,387	+		CA265_RS25445	0.77	+0.7
6,178,439	-		CA265_RS25445	0.82	-0.6
6,178,453	+		CA265_RS25445	0.83	+1.3
6,178,480	+		CA265_RS25445	0.85	+0.0
6,178,529	+		CA265_RS25445	0.89	+0.1
6,178,583	-				+0.2
6,178,600	+				+0.1
6,178,600	+				-0.0
6,178,601	-				-0.2
6,178,604	-				+1.5
6,178,624	+				-0.1
6,178,657	-				-0.5
6,178,675	-				+1.0
6,178,694	-				+1.3
6,178,707	+				+0.2
6,178,726	+				-0.5
6,178,726	+				+0.9
6,178,728	+				+0.7
6,178,729	-				+0.3
6,178,729	-				+1.6
6,178,734	-				+0.5
6,178,735	+				-0.2
6,178,805	-				+1.1
6,178,806	+				-1.3
6,178,806	+				+0.1
6,178,807	-				+0.7
6,178,807	-				-0.2
6,178,812	-				+0.0
6,178,812	-				-0.9
6,178,817	-				+0.7
6,178,820	-				+0.1
6,178,824	+				+0.5
6,178,825	-				+0.1
6,179,065	-		CA265_RS25450	0.67	-1.6
6,179,111	+		CA265_RS25450	0.80	-2.0
6,179,111	+		CA265_RS25450	0.80	-1.7
6,179,213	+				-0.5
6,179,272	+				+0.8
6,179,292	+				-0.2
6,179,299	+				+0.1
6,179,299	+				-1.2
6,179,301	+				+0.5
6,179,301	+				-0.6
6,179,355	+		CA265_RS25455	0.15	-0.1
6,179,356	-		CA265_RS25455	0.16	-0.3
6,179,385	+		CA265_RS25455	0.21	+0.6
6,179,385	+		CA265_RS25455	0.21	-0.2
6,179,422	+		CA265_RS25455	0.28	-0.2
6,179,433	+		CA265_RS25455	0.30	-0.9
6,179,434	-		CA265_RS25455	0.30	-0.2
6,179,464	-		CA265_RS25455	0.36	-0.4
6,179,489	-		CA265_RS25455	0.41	-0.0
6,179,489	-		CA265_RS25455	0.41	+2.0
6,179,535	+		CA265_RS25455	0.49	+0.6
6,179,545	+		CA265_RS25455	0.51	+0.1
6,179,582	-		CA265_RS25455	0.58	+2.2
6,179,601	+		CA265_RS25455	0.62	+0.3
6,179,645	-		CA265_RS25455	0.70	+0.5
6,179,660	-		CA265_RS25455	0.73	+0.1
6,179,670	+		CA265_RS25455	0.75	-0.8
6,179,773	+				+0.8
6,179,791	+				-1.8
6,179,792	-				-1.3
6,179,792	-				-0.9
6,179,891	+				+1.1
6,179,941	+				+0.2
6,179,942	-				+1.2
6,179,958	-				-0.8
6,179,958	-				+0.7
6,179,962	+				+0.9
6,180,085	+				-0.3
6,180,086	-				-0.7
6,180,089	+				-1.0
6,180,090	-				-0.4
6,180,119	+				+1.4
6,180,119	+				+0.9
6,180,165	-		CA265_RS25460	0.13	-0.4
6,180,165	-		CA265_RS25460	0.13	+0.4
6,180,169	-		CA265_RS25460	0.13	+0.1