Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24630

Experiment: R2A with Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.05 mg/ml
6,002,279	+		CA265_RS24625	0.48	-0.2
6,002,289	+		CA265_RS24625	0.49	+0.2
6,002,291	+		CA265_RS24625	0.49	-1.1
6,002,309	+		CA265_RS24625	0.50	-0.6
6,002,320	+		CA265_RS24625	0.52	-0.6
6,002,321	-		CA265_RS24625	0.52	+0.5
6,002,401	-		CA265_RS24625	0.60	-0.2
6,002,402	+		CA265_RS24625	0.60	-0.4
6,002,402	+		CA265_RS24625	0.60	-1.5
6,002,469	+		CA265_RS24625	0.66	-0.4
6,002,470	-		CA265_RS24625	0.66	+0.6
6,002,470	-		CA265_RS24625	0.66	-0.4
6,002,563	-		CA265_RS24625	0.76	+0.3
6,002,563	-		CA265_RS24625	0.76	-0.9
6,002,605	+		CA265_RS24625	0.80	-1.2
6,002,689	+		CA265_RS24625	0.88	-1.8
6,002,690	-		CA265_RS24625	0.88	-0.7
6,002,710	+				-1.7
6,002,821	+				-0.7
6,002,995	-				-0.2
6,003,064	+				-1.9
6,003,137	-				+1.0
6,003,176	+				-2.3
6,003,187	+				-1.9
6,003,228	+				+0.9
6,003,243	+				+0.7
6,003,252	-				+0.2
6,003,257	-				+0.2
6,003,380	+				+0.6
6,003,387	-				+0.4
6,003,467	+				+0.1
6,003,467	+				+0.6
6,003,468	-				+0.4
6,003,535	-				+0.6
6,003,624	+		CA265_RS24630	0.13	+0.5
6,003,625	-		CA265_RS24630	0.13	+0.6
6,003,698	+		CA265_RS24630	0.15	+1.0
6,003,740	+		CA265_RS24630	0.17	+0.3
6,003,741	-		CA265_RS24630	0.17	-0.1
6,003,752	+		CA265_RS24630	0.17	-0.2
6,003,828	+		CA265_RS24630	0.20	-0.1
6,003,882	-		CA265_RS24630	0.21	+0.5
6,003,891	+		CA265_RS24630	0.22	+0.0
6,003,926	-		CA265_RS24630	0.23	+0.3
6,003,993	-		CA265_RS24630	0.25	+1.1
6,003,993	-		CA265_RS24630	0.25	-0.0
6,004,002	+		CA265_RS24630	0.25	-0.3
6,004,002	+		CA265_RS24630	0.25	+0.5
6,004,005	+		CA265_RS24630	0.26	+0.5
6,004,011	+		CA265_RS24630	0.26	+0.7
6,004,012	-		CA265_RS24630	0.26	+0.0
6,004,046	+		CA265_RS24630	0.27	+0.2
6,004,047	-		CA265_RS24630	0.27	+0.5
6,004,148	-		CA265_RS24630	0.30	+0.0
6,004,170	+		CA265_RS24630	0.31	+0.1
6,004,170	+		CA265_RS24630	0.31	+1.6
6,004,229	-		CA265_RS24630	0.33	-0.1
6,004,232	+		CA265_RS24630	0.33	+0.1
6,004,287	+		CA265_RS24630	0.35	+2.8
6,004,308	+		CA265_RS24630	0.36	-0.4
6,004,319	+		CA265_RS24630	0.36	-0.2
6,004,320	-		CA265_RS24630	0.36	+0.6
6,004,337	+		CA265_RS24630	0.37	+1.0
6,004,435	+		CA265_RS24630	0.40	+0.1
6,004,441	-		CA265_RS24630	0.40	+0.5
6,004,465	-		CA265_RS24630	0.41	+0.3
6,004,504	-		CA265_RS24630	0.42	-0.7
6,004,504	-		CA265_RS24630	0.42	+0.1
6,004,526	+		CA265_RS24630	0.43	-0.1
6,004,560	-		CA265_RS24630	0.44	-0.2
6,004,580	-		CA265_RS24630	0.45	+0.3
6,004,580	-		CA265_RS24630	0.45	+0.2
6,004,604	+		CA265_RS24630	0.46	+2.2
6,004,635	-		CA265_RS24630	0.47	+1.1
6,004,650	+		CA265_RS24630	0.47	+0.1
6,004,651	-		CA265_RS24630	0.47	+0.1
6,004,669	+		CA265_RS24630	0.48	+0.6
6,004,669	+		CA265_RS24630	0.48	+0.4
6,004,670	-		CA265_RS24630	0.48	+0.6
6,004,747	+		CA265_RS24630	0.51	+0.6
6,004,748	-		CA265_RS24630	0.51	-0.2
6,004,770	-		CA265_RS24630	0.51	+0.2
6,004,813	+		CA265_RS24630	0.53	+0.5
6,004,816	+		CA265_RS24630	0.53	-0.1
6,004,845	+		CA265_RS24630	0.54	+1.6
6,004,863	-		CA265_RS24630	0.54	+0.6
6,004,909	-		CA265_RS24630	0.56	-0.6
6,004,911	+		CA265_RS24630	0.56	-0.2
6,004,924	+		CA265_RS24630	0.57	-2.5
6,004,938	+		CA265_RS24630	0.57	+0.9
6,004,945	-		CA265_RS24630	0.57	+0.3
6,004,961	-		CA265_RS24630	0.58	+0.2
6,005,027	-		CA265_RS24630	0.60	+0.0
6,005,046	+		CA265_RS24630	0.61	+0.0
6,005,046	+		CA265_RS24630	0.61	+0.5
6,005,114	+		CA265_RS24630	0.63	+0.1
6,005,137	-		CA265_RS24630	0.64	+0.8
6,005,157	+		CA265_RS24630	0.64	-0.1
6,005,157	+		CA265_RS24630	0.64	+0.1
6,005,167	+		CA265_RS24630	0.65	-1.2
6,005,168	-		CA265_RS24630	0.65	-0.4
6,005,180	-		CA265_RS24630	0.65	+0.3
6,005,196	+		CA265_RS24630	0.66	-0.1
6,005,197	-		CA265_RS24630	0.66	+0.7
6,005,227	+		CA265_RS24630	0.67	+0.1
6,005,233	+		CA265_RS24630	0.67	+1.1
6,005,233	+		CA265_RS24630	0.67	+0.7
6,005,234	-		CA265_RS24630	0.67	+0.6
6,005,281	-		CA265_RS24630	0.69	+0.1
6,005,283	+		CA265_RS24630	0.69	+0.8
6,005,287	+		CA265_RS24630	0.69	+0.4
6,005,290	-		CA265_RS24630	0.69	-0.7
6,005,290	-		CA265_RS24630	0.69	+0.6
6,005,305	+		CA265_RS24630	0.69	+0.1
6,005,329	+		CA265_RS24630	0.70	-0.1
6,005,330	-		CA265_RS24630	0.70	+0.7
6,005,330	-		CA265_RS24630	0.70	+0.6
6,005,347	+		CA265_RS24630	0.71	-0.9
6,005,370	-		CA265_RS24630	0.72	+0.9
6,005,460	-		CA265_RS24630	0.75	+1.2
6,005,493	+		CA265_RS24630	0.76	+0.2
6,005,513	+		CA265_RS24630	0.76	+0.5
6,005,514	-		CA265_RS24630	0.76	+0.8
6,005,524	+		CA265_RS24630	0.77	+0.1
6,005,593	-		CA265_RS24630	0.79	+0.4
6,005,593	-		CA265_RS24630	0.79	+0.3
6,005,731	-		CA265_RS24630	0.84	+0.9
6,005,737	-		CA265_RS24630	0.84	+1.6
6,005,761	-		CA265_RS24630	0.85	+0.3
6,005,826	+		CA265_RS24630	0.87	+0.2
6,005,827	-		CA265_RS24630	0.87	+0.5
6,005,827	-		CA265_RS24630	0.87	+0.4
6,005,837	+		CA265_RS24630	0.87	-0.0
6,005,858	-		CA265_RS24630	0.88	+0.4
6,005,945	+				+0.6
6,005,945	+				-0.4
6,005,953	-				-0.3
6,005,986	+				-0.1
6,005,987	-				+0.6
6,005,989	+				+0.1
6,005,991	+				-0.3
6,006,027	-				+0.3
6,006,038	-				+0.2
6,006,038	-				+0.9
6,006,039	+				+0.3
6,006,040	-				+0.6
6,006,161	-				+1.3
6,006,161	-				+0.3
6,006,162	+				+0.6
6,006,163	-				+0.8
6,006,187	+				+0.7
6,006,188	-				+0.5
6,006,195	-				+0.8
6,006,253	+				-0.5
6,006,277	+				+0.0
6,006,277	+				+0.7
6,006,342	-				+0.1
6,006,367	-				+1.1
6,006,391	-				+0.5
6,006,406	+		CA265_RS24635	0.11	-0.4
6,006,406	+		CA265_RS24635	0.11	+0.3
6,006,407	-		CA265_RS24635	0.11	+0.1
6,006,428	+		CA265_RS24635	0.12	-0.4
6,006,429	-		CA265_RS24635	0.12	+1.0
6,006,448	+		CA265_RS24635	0.14	+0.5
6,006,449	-		CA265_RS24635	0.14	+0.4
6,006,521	+		CA265_RS24635	0.18	+0.4
6,006,608	+		CA265_RS24635	0.23	+0.6
6,006,640	+		CA265_RS24635	0.25	-1.5
6,006,675	-		CA265_RS24635	0.28	+1.0
6,006,675	-		CA265_RS24635	0.28	-0.4
6,006,761	-		CA265_RS24635	0.33	+0.3
6,006,852	+		CA265_RS24635	0.39	-0.3
6,006,961	-		CA265_RS24635	0.45	+1.0
6,006,978	+		CA265_RS24635	0.47	-1.9
6,006,987	-		CA265_RS24635	0.47	-0.5
6,007,014	+		CA265_RS24635	0.49	+0.2
6,007,015	-		CA265_RS24635	0.49	+0.4
6,007,015	-		CA265_RS24635	0.49	+0.4
6,007,022	+		CA265_RS24635	0.49	-0.1
6,007,029	-		CA265_RS24635	0.50	-2.2
6,007,049	-		CA265_RS24635	0.51	-0.9
6,007,119	-		CA265_RS24635	0.55	+0.6
6,007,147	-		CA265_RS24635	0.57	+0.3
6,007,154	+		CA265_RS24635	0.58	+0.1
6,007,182	+		CA265_RS24635	0.59	-0.1
6,007,206	-		CA265_RS24635	0.61	+1.0