Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18315

Experiment: R2A with Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.05 mg/ml
4,561,679	-		CA265_RS18310	0.18	-0.9
4,561,767	-		CA265_RS18310	0.33	+0.9
4,561,821	-		CA265_RS18310	0.42	+0.1
4,561,841	-		CA265_RS18310	0.45	-1.1
4,561,891	+		CA265_RS18310	0.53	-0.6
4,561,954	-		CA265_RS18310	0.64	+0.4
4,562,050	-		CA265_RS18310	0.80	-0.0
4,562,061	+		CA265_RS18310	0.82	+1.3
4,562,066	+		CA265_RS18310	0.82	-0.6
4,562,127	+				-0.2
4,562,128	-				+0.8
4,562,128	-				+0.1
4,562,128	-				-0.6
4,562,133	-				+0.4
4,562,253	-				-0.2
4,562,253	-				-0.2
4,562,316	+				+1.0
4,562,317	-				+0.6
4,562,352	+				+1.1
4,562,460	-				-0.5
4,562,462	-				+0.7
4,562,597	+				-0.4
4,562,597	+				-0.8
4,562,633	+				+0.7
4,562,659	-		CA265_RS18315	0.11	-1.4
4,562,659	-		CA265_RS18315	0.11	-0.8
4,562,662	+		CA265_RS18315	0.11	+0.1
4,562,662	+		CA265_RS18315	0.11	-0.4
4,562,663	-		CA265_RS18315	0.11	-0.2
4,562,663	-		CA265_RS18315	0.11	-1.0
4,562,840	-		CA265_RS18315	0.34	+0.6
4,562,840	-		CA265_RS18315	0.34	-1.2
4,562,840	-		CA265_RS18315	0.34	+0.1
4,562,881	-		CA265_RS18315	0.39	-0.5
4,562,883	+		CA265_RS18315	0.39	-1.6
4,562,884	-		CA265_RS18315	0.39	+0.5
4,562,982	-		CA265_RS18315	0.52	-0.2
4,562,998	+		CA265_RS18315	0.54	-1.7
4,563,036	+		CA265_RS18315	0.59	-1.0
4,563,192	-		CA265_RS18315	0.78	+0.0
4,563,222	-		CA265_RS18315	0.82	-1.3
4,563,242	+		CA265_RS18315	0.85	-1.3
4,563,261	+		CA265_RS18315	0.87	-1.9
4,563,261	+		CA265_RS18315	0.87	-0.4
4,563,266	-		CA265_RS18315	0.88	+0.2
4,563,333	-				-0.6
4,563,417	-				-0.0
4,563,419	+				+0.6
4,563,443	+				+1.1