Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17870

Experiment: R2A with Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.05 mg/ml
4,468,173	-		CA265_RS17860	0.53	+0.6
4,468,202	+		CA265_RS17860	0.63	+0.2
4,468,203	-		CA265_RS17860	0.63	+0.6
4,468,203	-		CA265_RS17860	0.63	+0.0
4,468,214	-		CA265_RS17860	0.67	+0.9
4,468,254	+		CA265_RS17860	0.82	+0.3
4,468,254	+		CA265_RS17860	0.82	+0.7
4,468,265	+		CA265_RS17860	0.86	+0.9
4,468,293	-				-0.9
4,468,335	-				+0.4
4,468,376	+				-0.2
4,468,380	+				+0.4
4,468,381	-				+0.5
4,468,387	+				+0.5
4,468,514	-		CA265_RS17865	0.26	+0.1
4,468,552	+		CA265_RS17865	0.32	+0.1
4,468,553	-		CA265_RS17865	0.32	-0.0
4,468,630	+		CA265_RS17865	0.42	-0.2
4,468,631	-		CA265_RS17865	0.42	+0.4
4,468,638	-		CA265_RS17865	0.43	+0.6
4,468,685	-		CA265_RS17865	0.50	-0.0
4,468,688	+		CA265_RS17865	0.50	+0.2
4,468,698	+		CA265_RS17865	0.51	+0.9
4,468,730	+		CA265_RS17865	0.56	-0.0
4,468,731	-		CA265_RS17865	0.56	-0.1
4,468,731	-		CA265_RS17865	0.56	-0.0
4,468,740	-		CA265_RS17865	0.57	+0.7
4,468,745	+		CA265_RS17865	0.58	-0.3
4,468,801	+		CA265_RS17865	0.65	-0.4
4,468,802	-		CA265_RS17865	0.65	+0.6
4,468,842	-		CA265_RS17865	0.71	-0.6
4,468,852	+		CA265_RS17865	0.72	-0.1
4,468,907	-		CA265_RS17865	0.80	+1.1
4,468,960	+		CA265_RS17865	0.87	+0.2
4,468,970	+		CA265_RS17865	0.88	-0.1
4,468,990	+				+1.4
4,469,037	-				+1.2
4,469,050	+				+0.5
4,469,051	-				+0.2
4,469,053	-				+0.5
4,469,053	-				+0.5
4,469,061	-				+0.3
4,469,126	+				+0.3
4,469,165	+				+0.1
4,469,166	-				-0.9
4,469,192	-				+0.3
4,469,274	+		CA265_RS17870	0.11	-1.2
4,469,295	-		CA265_RS17870	0.13	-1.4
4,469,345	+		CA265_RS17870	0.17	+0.2
4,469,435	-		CA265_RS17870	0.25	-0.7
4,469,461	+		CA265_RS17870	0.27	-0.3
4,469,461	+		CA265_RS17870	0.27	+0.1
4,469,462	-		CA265_RS17870	0.27	-1.6
4,469,492	-		CA265_RS17870	0.30	-1.5
4,469,551	+		CA265_RS17870	0.35	-0.7
4,469,615	+		CA265_RS17870	0.41	+0.2
4,469,615	+		CA265_RS17870	0.41	-1.0
4,469,616	-		CA265_RS17870	0.41	-0.2
4,469,618	-		CA265_RS17870	0.41	-0.4
4,469,618	-		CA265_RS17870	0.41	-0.4
4,469,625	+		CA265_RS17870	0.42	-0.9
4,469,646	-		CA265_RS17870	0.44	+0.8
4,469,655	+		CA265_RS17870	0.44	-0.5
4,469,655	+		CA265_RS17870	0.44	-0.2
4,469,655	+		CA265_RS17870	0.44	-1.4
4,469,659	+		CA265_RS17870	0.45	-0.9
4,469,678	+		CA265_RS17870	0.46	+0.9
4,469,747	+		CA265_RS17870	0.53	+0.2
4,469,759	-		CA265_RS17870	0.54	-1.5
4,469,810	+		CA265_RS17870	0.58	+1.6
4,469,810	+		CA265_RS17870	0.58	-0.9
4,469,938	+		CA265_RS17870	0.69	-0.4
4,469,944	+		CA265_RS17870	0.70	-0.6
4,469,944	+		CA265_RS17870	0.70	-0.2
4,470,082	-		CA265_RS17870	0.82	+0.1
4,470,106	-		CA265_RS17870	0.84	-1.2
4,470,193	-				-0.7
4,470,205	-				-0.0
4,470,258	-				-2.0
4,470,267	+				-0.7
4,470,291	-				-0.5
4,470,291	-				+0.5
4,470,291	-				+1.1
4,470,297	+				+0.2
4,470,298	-				+0.4
4,470,321	+				+0.2
4,470,323	+				+0.5
4,470,323	+				+0.4
4,470,325	+				-0.6
4,470,419	-				+0.9
4,470,437	+				-0.1
4,470,448	+				+0.0
4,470,448	+				+1.5
4,470,610	+				+0.6
4,470,687	+		CA265_RS17875	0.13	-0.0
4,470,687	+		CA265_RS17875	0.13	+0.2
4,470,687	+		CA265_RS17875	0.13	+0.7
4,470,687	+		CA265_RS17875	0.13	+0.2
4,470,687	+		CA265_RS17875	0.13	+0.6
4,470,691	+		CA265_RS17875	0.13	+0.0
4,470,696	-		CA265_RS17875	0.13	+0.1
4,470,746	-		CA265_RS17875	0.16	+0.3
4,470,798	-		CA265_RS17875	0.18	-1.2
4,470,798	-		CA265_RS17875	0.18	+1.0
4,470,819	-		CA265_RS17875	0.19	+0.1
4,470,821	+		CA265_RS17875	0.19	+0.4
4,470,865	+		CA265_RS17875	0.21	+0.4
4,470,907	+		CA265_RS17875	0.23	+0.1
4,470,969	+		CA265_RS17875	0.26	+0.1
4,471,098	+		CA265_RS17875	0.32	+0.4
4,471,098	+		CA265_RS17875	0.32	-0.4
4,471,099	-		CA265_RS17875	0.32	-1.0
4,471,142	+		CA265_RS17875	0.34	+0.7
4,471,142	+		CA265_RS17875	0.34	+0.4
4,471,143	-		CA265_RS17875	0.34	-1.2
4,471,160	-				+0.6
4,471,204	+		CA265_RS17875	0.37	+0.4
4,471,208	-		CA265_RS17875	0.37	+0.1
4,471,224	-		CA265_RS17875	0.38	+0.6
4,471,246	+		CA265_RS17875	0.39	+1.0