Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4133

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4132 and Ac3H11_4133 are separated by 167 nucleotidesAc3H11_4133 and Ac3H11_4134 are separated by 99 nucleotidesAc3H11_4134 and Ac3H11_4135 are separated by 216 nucleotides Ac3H11_4132 - Transcriptional regulator, LysR family, at 388,157 to 389,059 _4132 Ac3H11_4133 - Aldo-keto reductase, at 389,227 to 390,267 _4133 Ac3H11_4134 - hypothetical protein; putative signal peptide, at 390,367 to 390,993 _4134 Ac3H11_4135 - secreted protein, at 391,210 to 391,497 _4135 Position (kb) 389 390 391Strain fitness (log2 ratio) -2 -1 0 1 2at 388.227 kb on + strandat 388.227 kb on + strandat 388.227 kb on + strandat 388.227 kb on + strandat 388.227 kb on + strandat 388.227 kb on + strandat 388.227 kb on + strandat 388.228 kb on - strandat 388.228 kb on - strandat 388.228 kb on - strandat 388.228 kb on - strandat 388.228 kb on - strandat 388.228 kb on - strandat 388.228 kb on - strandat 388.317 kb on + strand, within Ac3H11_4132at 388.318 kb on - strand, within Ac3H11_4132at 388.318 kb on - strand, within Ac3H11_4132at 388.318 kb on - strand, within Ac3H11_4132at 388.318 kb on - strand, within Ac3H11_4132at 388.323 kb on + strand, within Ac3H11_4132at 388.323 kb on + strand, within Ac3H11_4132at 388.323 kb on + strand, within Ac3H11_4132at 388.323 kb on + strand, within Ac3H11_4132at 388.323 kb on + strand, within Ac3H11_4132at 388.323 kb on + strand, within Ac3H11_4132at 388.324 kb on - strand, within Ac3H11_4132at 388.324 kb on - strand, within Ac3H11_4132at 388.324 kb on - strand, within Ac3H11_4132at 388.324 kb on - strand, within Ac3H11_4132at 388.449 kb on + strand, within Ac3H11_4132at 389.227 kb on - strandat 389.335 kb on + strand, within Ac3H11_4133at 389.335 kb on + strand, within Ac3H11_4133at 389.336 kb on - strand, within Ac3H11_4133at 389.336 kb on - strand, within Ac3H11_4133at 389.336 kb on - strand, within Ac3H11_4133at 389.569 kb on + strand, within Ac3H11_4133at 389.569 kb on + strand, within Ac3H11_4133at 389.570 kb on - strand, within Ac3H11_4133at 389.597 kb on + strand, within Ac3H11_4133at 389.598 kb on - strand, within Ac3H11_4133at 389.598 kb on - strand, within Ac3H11_4133at 389.629 kb on + strand, within Ac3H11_4133at 389.629 kb on + strand, within Ac3H11_4133at 389.629 kb on + strand, within Ac3H11_4133at 389.630 kb on - strand, within Ac3H11_4133at 389.630 kb on - strand, within Ac3H11_4133at 389.630 kb on - strand, within Ac3H11_4133at 389.630 kb on - strand, within Ac3H11_4133at 389.630 kb on - strand, within Ac3H11_4133at 389.630 kb on - strand, within Ac3H11_4133at 389.630 kb on - strand, within Ac3H11_4133at 389.632 kb on + strand, within Ac3H11_4133at 389.632 kb on + strand, within Ac3H11_4133at 389.632 kb on + strand, within Ac3H11_4133at 389.632 kb on + strand, within Ac3H11_4133at 389.632 kb on + strand, within Ac3H11_4133at 389.632 kb on + strand, within Ac3H11_4133at 389.633 kb on - strand, within Ac3H11_4133at 389.633 kb on - strand, within Ac3H11_4133at 389.633 kb on - strand, within Ac3H11_4133at 389.633 kb on - strand, within Ac3H11_4133at 389.633 kb on - strand, within Ac3H11_4133at 389.797 kb on + strand, within Ac3H11_4133at 389.797 kb on + strand, within Ac3H11_4133at 389.797 kb on + strand, within Ac3H11_4133at 389.873 kb on - strand, within Ac3H11_4133at 390.070 kb on - strand, within Ac3H11_4133at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.613 kb on + strand, within Ac3H11_4134at 390.614 kb on - strand, within Ac3H11_4134at 390.614 kb on - strand, within Ac3H11_4134at 390.614 kb on - strand, within Ac3H11_4134at 390.614 kb on - strand, within Ac3H11_4134at 390.614 kb on - strand, within Ac3H11_4134at 390.614 kb on - strand, within Ac3H11_4134at 390.614 kb on - strand, within Ac3H11_4134at 390.692 kb on - strand, within Ac3H11_4134at 390.692 kb on - strand, within Ac3H11_4134at 390.727 kb on + strand, within Ac3H11_4134at 390.733 kb on + strand, within Ac3H11_4134at 390.756 kb on + strand, within Ac3H11_4134at 390.756 kb on + strand, within Ac3H11_4134at 390.756 kb on + strand, within Ac3H11_4134at 390.756 kb on + strand, within Ac3H11_4134at 390.757 kb on - strand, within Ac3H11_4134at 390.757 kb on - strand, within Ac3H11_4134at 391.042 kb on + strandat 391.046 kb on + strandat 391.046 kb on + strandat 391.047 kb on - strandat 391.047 kb on - strandat 391.047 kb on - strandat 391.047 kb on - strandat 391.047 kb on - strandat 391.234 kb on + strandat 391.234 kb on + strandat 391.234 kb on + strandat 391.234 kb on + strandat 391.235 kb on - strandat 391.235 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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388,227 + +0.3
388,227 + -1.0
388,227 + -0.8
388,227 + +0.8
388,227 + +0.7
388,227 + +0.0
388,227 + -0.1
388,228 - +0.6
388,228 - +0.1
388,228 - +1.3
388,228 - -0.3
388,228 - +0.6
388,228 - -0.8
388,228 - -0.2
388,317 + Ac3H11_4132 0.18 -0.7
388,318 - Ac3H11_4132 0.18 +0.4
388,318 - Ac3H11_4132 0.18 +0.7
388,318 - Ac3H11_4132 0.18 +0.9
388,318 - Ac3H11_4132 0.18 +1.0
388,323 + Ac3H11_4132 0.18 -1.6
388,323 + Ac3H11_4132 0.18 -0.3
388,323 + Ac3H11_4132 0.18 -0.2
388,323 + Ac3H11_4132 0.18 +0.5
388,323 + Ac3H11_4132 0.18 -1.7
388,323 + Ac3H11_4132 0.18 -0.3
388,324 - Ac3H11_4132 0.18 -0.2
388,324 - Ac3H11_4132 0.18 -0.8
388,324 - Ac3H11_4132 0.18 +0.0
388,324 - Ac3H11_4132 0.18 +0.7
388,449 + Ac3H11_4132 0.32 -0.6
389,227 - +0.8
389,335 + Ac3H11_4133 0.10 +0.4
389,335 + Ac3H11_4133 0.10 +2.1
389,336 - Ac3H11_4133 0.10 +1.3
389,336 - Ac3H11_4133 0.10 +1.3
389,336 - Ac3H11_4133 0.10 +0.7
389,569 + Ac3H11_4133 0.33 +0.6
389,569 + Ac3H11_4133 0.33 -1.2
389,570 - Ac3H11_4133 0.33 -0.2
389,597 + Ac3H11_4133 0.36 +1.0
389,598 - Ac3H11_4133 0.36 -0.5
389,598 - Ac3H11_4133 0.36 -0.4
389,629 + Ac3H11_4133 0.39 +0.5
389,629 + Ac3H11_4133 0.39 +0.7
389,629 + Ac3H11_4133 0.39 +0.7
389,630 - Ac3H11_4133 0.39 +0.3
389,630 - Ac3H11_4133 0.39 +1.1
389,630 - Ac3H11_4133 0.39 +0.1
389,630 - Ac3H11_4133 0.39 +0.1
389,630 - Ac3H11_4133 0.39 -0.1
389,630 - Ac3H11_4133 0.39 +0.5
389,630 - Ac3H11_4133 0.39 +1.7
389,632 + Ac3H11_4133 0.39 +0.3
389,632 + Ac3H11_4133 0.39 +0.4
389,632 + Ac3H11_4133 0.39 +0.4
389,632 + Ac3H11_4133 0.39 -0.7
389,632 + Ac3H11_4133 0.39 +0.2
389,632 + Ac3H11_4133 0.39 +1.0
389,633 - Ac3H11_4133 0.39 +1.7
389,633 - Ac3H11_4133 0.39 -0.9
389,633 - Ac3H11_4133 0.39 +0.9
389,633 - Ac3H11_4133 0.39 +0.6
389,633 - Ac3H11_4133 0.39 +0.2
389,797 + Ac3H11_4133 0.55 +0.5
389,797 + Ac3H11_4133 0.55 -0.9
389,797 + Ac3H11_4133 0.55 +0.8
389,873 - Ac3H11_4133 0.62 +0.6
390,070 - Ac3H11_4133 0.81 +0.2
390,613 + Ac3H11_4134 0.39 -0.1
390,613 + Ac3H11_4134 0.39 -0.1
390,613 + Ac3H11_4134 0.39 -0.0
390,613 + Ac3H11_4134 0.39 -0.3
390,613 + Ac3H11_4134 0.39 +0.9
390,613 + Ac3H11_4134 0.39 +0.1
390,613 + Ac3H11_4134 0.39 +0.6
390,613 + Ac3H11_4134 0.39 +0.4
390,613 + Ac3H11_4134 0.39 +0.8
390,614 - Ac3H11_4134 0.39 +0.6
390,614 - Ac3H11_4134 0.39 -0.1
390,614 - Ac3H11_4134 0.39 -0.2
390,614 - Ac3H11_4134 0.39 +1.5
390,614 - Ac3H11_4134 0.39 +0.5
390,614 - Ac3H11_4134 0.39 +0.4
390,614 - Ac3H11_4134 0.39 -0.3
390,692 - Ac3H11_4134 0.52 +0.3
390,692 - Ac3H11_4134 0.52 +0.2
390,727 + Ac3H11_4134 0.57 +0.6
390,733 + Ac3H11_4134 0.58 -0.6
390,756 + Ac3H11_4134 0.62 +0.2
390,756 + Ac3H11_4134 0.62 -0.7
390,756 + Ac3H11_4134 0.62 +0.2
390,756 + Ac3H11_4134 0.62 -1.2
390,757 - Ac3H11_4134 0.62 +1.6
390,757 - Ac3H11_4134 0.62 +0.3
391,042 + +0.0
391,046 + +0.4
391,046 + -0.3
391,047 - -1.9
391,047 - +0.6
391,047 - -1.2
391,047 - +1.0
391,047 - +0.1
391,234 + +0.1
391,234 + +2.6
391,234 + -1.8
391,234 + +0.5
391,235 - +0.4
391,235 - -1.6

Or see this region's nucleotide sequence