Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3926 and Ac3H11_3927 overlap by 39 nucleotides Ac3H11_3927 and Ac3H11_3928 are separated by 177 nucleotides Ac3H11_3928 and Ac3H11_3929 are separated by 49 nucleotides
Ac3H11_3926 - putative membrane protein, at 142,218 to 143,453
_3926
Ac3H11_3927 - hypothetical protein, at 143,415 to 143,540
_3927
Ac3H11_3928 - Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-), at 143,718 to 144,380
_3928
Ac3H11_3929 - ATPase associated with various cellular activities, AAA_5, at 144,430 to 145,341
_3929
Position (kb)
143
144 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 142.442 kb on - strand, within Ac3H11_3926 at 142.442 kb on - strand, within Ac3H11_3926 at 142.442 kb on - strand at 142.650 kb on - strand, within Ac3H11_3926 at 142.781 kb on + strand at 142.984 kb on + strand, within Ac3H11_3926 at 142.985 kb on - strand, within Ac3H11_3926 at 142.985 kb on - strand, within Ac3H11_3926 at 142.985 kb on - strand at 143.003 kb on + strand at 143.003 kb on + strand at 143.003 kb on + strand at 143.003 kb on + strand, within Ac3H11_3926 at 143.003 kb on + strand at 143.004 kb on - strand at 143.110 kb on + strand, within Ac3H11_3926 at 143.110 kb on + strand, within Ac3H11_3926 at 143.111 kb on - strand, within Ac3H11_3926 at 143.111 kb on - strand at 143.587 kb on + strand at 143.588 kb on - strand at 143.588 kb on - strand at 143.773 kb on + strand at 143.773 kb on + strand at 143.773 kb on + strand at 143.773 kb on + strand at 143.773 kb on + strand at 143.773 kb on + strand at 143.774 kb on - strand at 143.774 kb on - strand at 143.774 kb on - strand at 143.774 kb on - strand at 143.774 kb on - strand at 143.774 kb on - strand at 143.774 kb on - strand at 143.872 kb on + strand, within Ac3H11_3928 at 143.872 kb on + strand, within Ac3H11_3928 at 143.873 kb on - strand, within Ac3H11_3928 at 143.873 kb on - strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 143.896 kb on + strand, within Ac3H11_3928 at 144.067 kb on + strand, within Ac3H11_3928 at 144.068 kb on - strand, within Ac3H11_3928 at 144.068 kb on - strand, within Ac3H11_3928 at 144.068 kb on - strand, within Ac3H11_3928 at 144.068 kb on - strand, within Ac3H11_3928 at 144.070 kb on + strand, within Ac3H11_3928 at 144.070 kb on + strand, within Ac3H11_3928 at 144.071 kb on - strand, within Ac3H11_3928 at 144.071 kb on - strand, within Ac3H11_3928 at 144.154 kb on + strand, within Ac3H11_3928 at 144.155 kb on - strand, within Ac3H11_3928 at 144.155 kb on - strand, within Ac3H11_3928 at 144.155 kb on - strand, within Ac3H11_3928 at 144.155 kb on - strand, within Ac3H11_3928 at 144.357 kb on + strand at 144.357 kb on + strand at 144.358 kb on - strand at 144.358 kb on - strand at 144.435 kb on + strand at 144.436 kb on - strand at 144.436 kb on - strand at 144.438 kb on - strand at 144.438 kb on - strand at 144.511 kb on + strand at 144.511 kb on + strand at 144.511 kb on + strand at 144.511 kb on + strand at 144.511 kb on + strand at 144.512 kb on - strand at 144.512 kb on - strand at 144.512 kb on - strand at 144.512 kb on - strand at 144.512 kb on - strand at 144.512 kb on - strand at 144.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 142,442 - Ac3H11_3926 0.18 -1.0 142,442 - Ac3H11_3926 0.18 -1.8 142,442 - -0.5 142,650 - Ac3H11_3926 0.35 -1.3 142,781 + -0.2 142,984 + Ac3H11_3926 0.62 -0.5 142,985 - Ac3H11_3926 0.62 +0.7 142,985 - Ac3H11_3926 0.62 -1.4 142,985 - +0.3 143,003 + +0.5 143,003 + -0.5 143,003 + -0.2 143,003 + Ac3H11_3926 0.64 -0.1 143,003 + +2.3 143,004 - -0.7 143,110 + Ac3H11_3926 0.72 +0.6 143,110 + Ac3H11_3926 0.72 +1.0 143,111 - Ac3H11_3926 0.72 -0.2 143,111 - -0.2 143,587 + +1.0 143,588 - +0.4 143,588 - +0.4 143,773 + +0.4 143,773 + -1.5 143,773 + -0.4 143,773 + -2.7 143,773 + -1.6 143,773 + -0.6 143,774 - +2.3 143,774 - -3.4 143,774 - -2.2 143,774 - -1.8 143,774 - -1.3 143,774 - -0.5 143,774 - -1.5 143,872 + Ac3H11_3928 0.23 -1.8 143,872 + Ac3H11_3928 0.23 -1.6 143,873 - Ac3H11_3928 0.23 -0.6 143,873 - Ac3H11_3928 0.23 -1.6 143,896 + Ac3H11_3928 0.27 -0.5 143,896 + Ac3H11_3928 0.27 -1.6 143,896 + Ac3H11_3928 0.27 -1.4 143,896 + Ac3H11_3928 0.27 -1.3 143,896 + Ac3H11_3928 0.27 +0.3 143,896 + Ac3H11_3928 0.27 -0.6 143,896 + Ac3H11_3928 0.27 -1.1 143,896 + Ac3H11_3928 0.27 -0.8 143,896 + Ac3H11_3928 0.27 -2.2 144,067 + Ac3H11_3928 0.53 -0.2 144,068 - Ac3H11_3928 0.53 -1.0 144,068 - Ac3H11_3928 0.53 -1.7 144,068 - Ac3H11_3928 0.53 -0.2 144,068 - Ac3H11_3928 0.53 -1.0 144,070 + Ac3H11_3928 0.53 -1.4 144,070 + Ac3H11_3928 0.53 -1.0 144,071 - Ac3H11_3928 0.53 -2.4 144,071 - Ac3H11_3928 0.53 -0.4 144,154 + Ac3H11_3928 0.66 -2.2 144,155 - Ac3H11_3928 0.66 +0.5 144,155 - Ac3H11_3928 0.66 -0.9 144,155 - Ac3H11_3928 0.66 -1.5 144,155 - Ac3H11_3928 0.66 -0.9 144,357 + -1.1 144,357 + -0.3 144,358 - -0.5 144,358 - -0.7 144,435 + -0.9 144,436 - +0.2 144,436 - -1.5 144,438 - -0.0 144,438 - -0.4 144,511 + -0.2 144,511 + -0.4 144,511 + -0.5 144,511 + -0.3 144,511 + +0.5 144,512 - +0.3 144,512 - -0.9 144,512 - +0.5 144,512 - +0.4 144,512 - +0.7 144,512 - -1.1 144,512 - -0.1
Or see this region's nucleotide sequence