Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_3093

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_3091 and Ac3H11_3092 are separated by 37 nucleotidesAc3H11_3092 and Ac3H11_3093 are separated by 132 nucleotides Ac3H11_3091 - benzoate degradation ring-cleavage hydrolase, at 117,183 to 117,989 _3091 Ac3H11_3092 - transcriptional regulator, Crp/Fnr family, at 118,027 to 118,719 _3092 Ac3H11_3093 - Mobile element protein, at 118,852 to 118,974 _3093 Position (kb) 118 119Strain fitness (log2 ratio) -1 0 1at 117.856 kb on + strand, within Ac3H11_3091at 117.856 kb on + strand, within Ac3H11_3091at 117.856 kb on + strand, within Ac3H11_3091at 117.857 kb on - strand, within Ac3H11_3091at 118.550 kb on + strand, within Ac3H11_3092at 118.767 kb on + strandat 118.767 kb on + strandat 118.767 kb on + strandat 118.767 kb on + strandat 118.767 kb on + strandat 118.767 kb on + strandat 118.767 kb on + strandat 118.768 kb on - strandat 118.768 kb on - strandat 118.768 kb on - strandat 118.769 kb on + strandat 118.770 kb on - strandat 118.770 kb on - strandat 118.837 kb on - strandat 118.837 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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117,856 + Ac3H11_3091 0.83 +1.4
117,856 + Ac3H11_3091 0.83 +0.9
117,856 + Ac3H11_3091 0.83 +0.2
117,857 - Ac3H11_3091 0.84 +1.0
118,550 + Ac3H11_3092 0.75 -0.6
118,767 + -0.0
118,767 + -0.7
118,767 + -0.1
118,767 + +0.3
118,767 + +0.4
118,767 + -1.2
118,767 + +0.5
118,768 - +0.5
118,768 - -1.3
118,768 - +0.3
118,769 + +1.0
118,770 - -0.5
118,770 - +1.0
118,837 - -0.4
118,837 - +0.8

Or see this region's nucleotide sequence