Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_140 and Ac3H11_141 are separated by 188 nucleotides Ac3H11_141 and Ac3H11_142 are separated by 73 nucleotides
Ac3H11_140 - Tricarboxylate transport protein TctC, at 23,959 to 24,915
_140
Ac3H11_141 - Tricarboxylate transport protein TctC, at 25,104 to 26,102
_141
Ac3H11_142 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 26,176 to 27,117
_142
Position (kb) 25
26
27 Strain fitness (log2 ratio) -1
0
1 at 24.185 kb on + strand, within Ac3H11_140 at 24.185 kb on + strand, within Ac3H11_140 at 24.185 kb on + strand, within Ac3H11_140 at 24.381 kb on - strand, within Ac3H11_140 at 24.654 kb on - strand, within Ac3H11_140 at 24.654 kb on - strand, within Ac3H11_140 at 24.654 kb on - strand, within Ac3H11_140 at 24.665 kb on + strand, within Ac3H11_140 at 24.666 kb on - strand, within Ac3H11_140 at 24.666 kb on - strand, within Ac3H11_140 at 24.666 kb on - strand, within Ac3H11_140 at 24.816 kb on - strand, within Ac3H11_140 at 24.926 kb on + strand at 24.926 kb on + strand at 24.926 kb on + strand at 24.926 kb on + strand at 24.927 kb on - strand at 24.927 kb on - strand at 24.927 kb on - strand at 24.931 kb on - strand at 24.956 kb on + strand at 24.957 kb on - strand at 24.957 kb on - strand at 24.957 kb on - strand at 25.142 kb on + strand at 25.142 kb on + strand at 25.142 kb on + strand at 25.142 kb on + strand at 25.143 kb on - strand at 25.144 kb on + strand at 25.145 kb on - strand at 25.321 kb on + strand, within Ac3H11_141 at 25.322 kb on - strand, within Ac3H11_141 at 25.322 kb on - strand, within Ac3H11_141 at 25.339 kb on + strand, within Ac3H11_141 at 25.339 kb on + strand, within Ac3H11_141 at 25.525 kb on + strand, within Ac3H11_141 at 25.526 kb on - strand, within Ac3H11_141 at 25.651 kb on + strand, within Ac3H11_141 at 25.651 kb on + strand, within Ac3H11_141 at 25.651 kb on + strand, within Ac3H11_141 at 25.651 kb on + strand, within Ac3H11_141 at 25.652 kb on - strand, within Ac3H11_141 at 25.652 kb on - strand, within Ac3H11_141 at 25.652 kb on - strand, within Ac3H11_141 at 25.652 kb on - strand, within Ac3H11_141 at 25.652 kb on - strand, within Ac3H11_141 at 25.713 kb on + strand, within Ac3H11_141 at 25.713 kb on + strand, within Ac3H11_141 at 25.714 kb on - strand, within Ac3H11_141 at 25.769 kb on - strand, within Ac3H11_141 at 26.043 kb on - strand at 26.047 kb on - strand at 26.259 kb on - strand at 26.576 kb on + strand, within Ac3H11_142 at 26.576 kb on + strand, within Ac3H11_142 at 26.576 kb on + strand, within Ac3H11_142 at 26.577 kb on - strand, within Ac3H11_142 at 26.577 kb on - strand, within Ac3H11_142 at 26.577 kb on - strand, within Ac3H11_142 at 26.577 kb on - strand, within Ac3H11_142 at 27.039 kb on - strand at 27.050 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 24,185 + Ac3H11_140 0.24 -0.5 24,185 + Ac3H11_140 0.24 +0.2 24,185 + Ac3H11_140 0.24 +0.0 24,381 - Ac3H11_140 0.44 -0.2 24,654 - Ac3H11_140 0.73 +0.8 24,654 - Ac3H11_140 0.73 -0.2 24,654 - Ac3H11_140 0.73 +0.1 24,665 + Ac3H11_140 0.74 +1.0 24,666 - Ac3H11_140 0.74 +0.8 24,666 - Ac3H11_140 0.74 +0.2 24,666 - Ac3H11_140 0.74 +0.6 24,816 - Ac3H11_140 0.90 +0.1 24,926 + -0.8 24,926 + -1.1 24,926 + -1.6 24,926 + +0.1 24,927 - -1.2 24,927 - +0.0 24,927 - +1.1 24,931 - +0.5 24,956 + -0.2 24,957 - -1.5 24,957 - +0.3 24,957 - -0.6 25,142 + -1.5 25,142 + -0.1 25,142 + +0.4 25,142 + +0.0 25,143 - +0.7 25,144 + -1.0 25,145 - +0.0 25,321 + Ac3H11_141 0.22 -0.2 25,322 - Ac3H11_141 0.22 +0.4 25,322 - Ac3H11_141 0.22 +0.3 25,339 + Ac3H11_141 0.24 +0.0 25,339 + Ac3H11_141 0.24 +0.6 25,525 + Ac3H11_141 0.42 +0.6 25,526 - Ac3H11_141 0.42 +0.1 25,651 + Ac3H11_141 0.55 +0.2 25,651 + Ac3H11_141 0.55 +0.3 25,651 + Ac3H11_141 0.55 +0.7 25,651 + Ac3H11_141 0.55 +0.4 25,652 - Ac3H11_141 0.55 +0.5 25,652 - Ac3H11_141 0.55 -0.0 25,652 - Ac3H11_141 0.55 +0.8 25,652 - Ac3H11_141 0.55 +0.6 25,652 - Ac3H11_141 0.55 -0.1 25,713 + Ac3H11_141 0.61 -0.0 25,713 + Ac3H11_141 0.61 +0.3 25,714 - Ac3H11_141 0.61 +0.3 25,769 - Ac3H11_141 0.67 -0.9 26,043 - -0.1 26,047 - +0.7 26,259 - +0.8 26,576 + Ac3H11_142 0.42 -0.5 26,576 + Ac3H11_142 0.42 +0.1 26,576 + Ac3H11_142 0.42 +0.5 26,577 - Ac3H11_142 0.43 +0.5 26,577 - Ac3H11_142 0.43 +0.5 26,577 - Ac3H11_142 0.43 -0.2 26,577 - Ac3H11_142 0.43 -0.5 27,039 - +0.2 27,050 + -0.4
Or see this region's nucleotide sequence