Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19765 and AO353_19770 are separated by 153 nucleotides AO353_19770 and AO353_19775 overlap by 1 nucleotides AO353_19775 and AO353_19780 overlap by 4 nucleotides
AO353_19765: AO353_19765 - hypothetical protein, at 4,344,919 to 4,345,998
_19765
AO353_19770: AO353_19770 - peptidase, at 4,346,152 to 4,346,466
_19770
AO353_19775: AO353_19775 - transcriptional regulator, at 4,346,466 to 4,347,134
_19775
AO353_19780: AO353_19780 - histidine kinase, at 4,347,131 to 4,348,444
_19780
Position (kb) 4346
4347 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4345.238 kb on + strand, within AO353_19765 at 4345.238 kb on + strand, within AO353_19765 at 4345.256 kb on + strand, within AO353_19765 at 4345.256 kb on + strand, within AO353_19765 at 4345.257 kb on - strand, within AO353_19765 at 4345.257 kb on - strand, within AO353_19765 at 4345.281 kb on - strand, within AO353_19765 at 4345.281 kb on - strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.312 kb on + strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.313 kb on - strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.706 kb on + strand, within AO353_19765 at 4345.707 kb on - strand, within AO353_19765 at 4345.938 kb on + strand at 4345.998 kb on + strand at 4346.027 kb on + strand at 4346.044 kb on + strand at 4346.044 kb on + strand at 4346.044 kb on + strand at 4346.045 kb on - strand at 4346.045 kb on - strand at 4346.078 kb on - strand at 4346.078 kb on - strand at 4346.091 kb on + strand at 4346.091 kb on + strand at 4346.092 kb on - strand at 4346.092 kb on - strand at 4346.092 kb on - strand at 4346.108 kb on + strand at 4346.108 kb on + strand at 4346.113 kb on + strand at 4346.114 kb on - strand at 4346.114 kb on - strand at 4346.114 kb on - strand at 4346.114 kb on - strand at 4346.114 kb on - strand at 4346.114 kb on - strand at 4346.122 kb on + strand at 4346.122 kb on + strand at 4346.123 kb on - strand at 4346.123 kb on - strand at 4346.146 kb on + strand at 4346.147 kb on - strand at 4346.147 kb on - strand at 4346.147 kb on - strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.150 kb on + strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.151 kb on - strand at 4346.161 kb on - strand at 4346.161 kb on - strand at 4346.174 kb on - strand at 4346.174 kb on - strand at 4346.326 kb on - strand, within AO353_19770 at 4346.366 kb on - strand, within AO353_19770 at 4346.366 kb on - strand, within AO353_19770 at 4346.371 kb on + strand, within AO353_19770 at 4346.372 kb on - strand, within AO353_19770 at 4346.372 kb on - strand, within AO353_19770 at 4346.495 kb on - strand at 4346.539 kb on - strand, within AO353_19775 at 4346.578 kb on - strand, within AO353_19775 at 4346.598 kb on + strand, within AO353_19775 at 4346.599 kb on - strand, within AO353_19775 at 4346.599 kb on - strand, within AO353_19775 at 4346.757 kb on + strand, within AO353_19775 at 4346.757 kb on + strand, within AO353_19775 at 4346.757 kb on + strand, within AO353_19775 at 4346.757 kb on + strand, within AO353_19775 at 4346.758 kb on - strand, within AO353_19775 at 4346.946 kb on + strand, within AO353_19775 at 4346.947 kb on - strand, within AO353_19775 at 4346.947 kb on - strand, within AO353_19775 at 4347.004 kb on - strand, within AO353_19775 at 4347.108 kb on + strand at 4347.242 kb on + strand at 4347.243 kb on - strand at 4347.344 kb on + strand, within AO353_19780 at 4347.344 kb on + strand, within AO353_19780 at 4347.368 kb on + strand, within AO353_19780 at 4347.368 kb on + strand, within AO353_19780 at 4347.369 kb on - strand, within AO353_19780 at 4347.369 kb on - strand, within AO353_19780 at 4347.369 kb on - strand, within AO353_19780 at 4347.369 kb on - strand, within AO353_19780 at 4347.369 kb on - strand, within AO353_19780
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,345,238 + AO353_19765 0.30 +0.5 4,345,238 + AO353_19765 0.30 +0.3 4,345,256 + AO353_19765 0.31 +1.0 4,345,256 + AO353_19765 0.31 -1.0 4,345,257 - AO353_19765 0.31 -1.1 4,345,257 - AO353_19765 0.31 -1.3 4,345,281 - AO353_19765 0.34 +1.1 4,345,281 - AO353_19765 0.34 -1.1 4,345,312 + AO353_19765 0.36 -0.3 4,345,312 + AO353_19765 0.36 +0.0 4,345,312 + AO353_19765 0.36 -1.4 4,345,312 + AO353_19765 0.36 -0.1 4,345,312 + AO353_19765 0.36 +0.1 4,345,312 + AO353_19765 0.36 -0.4 4,345,313 - AO353_19765 0.36 +0.6 4,345,313 - AO353_19765 0.36 -0.3 4,345,313 - AO353_19765 0.36 +0.2 4,345,313 - AO353_19765 0.36 -0.2 4,345,313 - AO353_19765 0.36 +1.0 4,345,313 - AO353_19765 0.36 -0.2 4,345,706 + AO353_19765 0.73 -0.5 4,345,706 + AO353_19765 0.73 +2.1 4,345,706 + AO353_19765 0.73 -0.4 4,345,706 + AO353_19765 0.73 -0.4 4,345,706 + AO353_19765 0.73 -1.3 4,345,706 + AO353_19765 0.73 -1.6 4,345,707 - AO353_19765 0.73 +0.5 4,345,938 + +0.5 4,345,998 + -0.0 4,346,027 + -1.9 4,346,044 + -0.7 4,346,044 + +0.6 4,346,044 + +0.1 4,346,045 - +1.6 4,346,045 - +0.6 4,346,078 - -1.4 4,346,078 - +0.9 4,346,091 + +0.6 4,346,091 + +1.6 4,346,092 - +2.3 4,346,092 - -1.1 4,346,092 - +0.3 4,346,108 + -0.3 4,346,108 + +0.6 4,346,113 + +0.2 4,346,114 - +0.3 4,346,114 - -0.3 4,346,114 - -0.0 4,346,114 - +0.1 4,346,114 - +0.0 4,346,114 - +1.1 4,346,122 + -0.6 4,346,122 + -0.4 4,346,123 - +0.4 4,346,123 - +1.0 4,346,146 + -2.3 4,346,147 - -1.6 4,346,147 - +0.6 4,346,147 - +0.0 4,346,150 + -2.2 4,346,150 + -0.7 4,346,150 + -2.0 4,346,150 + -1.9 4,346,150 + -0.9 4,346,150 + -1.7 4,346,150 + +0.6 4,346,150 + -0.3 4,346,150 + -1.5 4,346,150 + +1.0 4,346,150 + -0.1 4,346,150 + -0.3 4,346,151 - -1.2 4,346,151 - -0.2 4,346,151 - -0.3 4,346,151 - +0.0 4,346,151 - +0.8 4,346,151 - +0.2 4,346,151 - -0.2 4,346,151 - -1.6 4,346,151 - +1.6 4,346,151 - +0.0 4,346,151 - +1.9 4,346,151 - -0.9 4,346,151 - +0.8 4,346,151 - -0.3 4,346,151 - +0.0 4,346,151 - +1.9 4,346,151 - +0.0 4,346,151 - -1.5 4,346,151 - -0.8 4,346,151 - -0.2 4,346,151 - +0.5 4,346,151 - -0.6 4,346,151 - -0.7 4,346,151 - +0.5 4,346,151 - -0.4 4,346,151 - -0.6 4,346,151 - +0.8 4,346,151 - -0.1 4,346,161 - +0.9 4,346,161 - -0.1 4,346,174 - +0.6 4,346,174 - -0.1 4,346,326 - AO353_19770 0.55 -1.7 4,346,366 - AO353_19770 0.68 +0.6 4,346,366 - AO353_19770 0.68 -1.5 4,346,371 + AO353_19770 0.70 -1.1 4,346,372 - AO353_19770 0.70 +0.5 4,346,372 - AO353_19770 0.70 -0.8 4,346,495 - +0.3 4,346,539 - AO353_19775 0.11 +1.1 4,346,578 - AO353_19775 0.17 +1.6 4,346,598 + AO353_19775 0.20 -0.6 4,346,599 - AO353_19775 0.20 +0.7 4,346,599 - AO353_19775 0.20 -0.1 4,346,757 + AO353_19775 0.43 -0.2 4,346,757 + AO353_19775 0.43 +1.0 4,346,757 + AO353_19775 0.43 +0.5 4,346,757 + AO353_19775 0.43 -0.3 4,346,758 - AO353_19775 0.44 +0.7 4,346,946 + AO353_19775 0.72 +0.1 4,346,947 - AO353_19775 0.72 -1.3 4,346,947 - AO353_19775 0.72 -0.2 4,347,004 - AO353_19775 0.80 +2.0 4,347,108 + +1.6 4,347,242 + +0.7 4,347,243 - -0.2 4,347,344 + AO353_19780 0.16 +0.3 4,347,344 + AO353_19780 0.16 -0.3 4,347,368 + AO353_19780 0.18 -0.4 4,347,368 + AO353_19780 0.18 +0.6 4,347,369 - AO353_19780 0.18 +0.4 4,347,369 - AO353_19780 0.18 +0.3 4,347,369 - AO353_19780 0.18 +0.2 4,347,369 - AO353_19780 0.18 +0.6 4,347,369 - AO353_19780 0.18 +0.2
Or see this region's nucleotide sequence