Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17595

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,877,882	+				-2.5
3,877,883	-				-0.8
3,877,883	-				-2.0
3,877,883	-				-1.2
3,877,883	-				-0.5
3,877,883	-				-1.7
3,877,891	+				-0.2
3,877,891	+				-2.2
3,877,891	+				-1.2
3,877,891	+				-2.2
3,877,891	+				-1.4
3,877,891	+				-0.9
3,877,891	+				-3.8
3,877,891	+				-1.8
3,877,891	+				-2.3
3,877,892	-				+0.2
3,877,900	+				-2.4
3,877,900	+				-2.7
3,877,900	+				-2.8
3,877,900	+				-0.8
3,877,900	+				-2.1
3,877,900	+				-0.5
3,877,900	+				-3.2
3,877,901	-				+1.8
3,877,901	-				+0.3
3,877,901	-				+1.1
3,877,901	-				+0.8
3,877,991	-				-2.0
3,878,056	+				-0.3
3,878,056	+				-0.6
3,878,101	-				-2.7
3,878,101	-				-0.2
3,878,101	-				-0.5
3,878,318	+		AO353_17590	0.31	-3.3
3,878,319	-		AO353_17590	0.31	-1.7
3,878,319	-		AO353_17590	0.31	-1.5
3,878,400	+		AO353_17590	0.43	-3.6
3,878,401	-		AO353_17590	0.43	-1.2
3,878,401	-		AO353_17590	0.43	-4.0
3,878,468	-		AO353_17590	0.53	-1.5
3,878,508	+		AO353_17590	0.59	-3.7
3,878,508	+		AO353_17590	0.59	-2.5
3,878,508	+		AO353_17590	0.59	-3.1
3,878,508	+		AO353_17590	0.59	-2.3
3,878,508	+		AO353_17590	0.59	-2.8
3,878,508	+		AO353_17590	0.59	-1.7
3,878,508	+		AO353_17590	0.59	-1.5
3,878,509	-		AO353_17590	0.60	-1.0
3,878,509	-		AO353_17590	0.60	-2.2
3,878,509	-		AO353_17590	0.60	-2.8
3,878,509	-		AO353_17590	0.60	-2.4
3,878,509	-		AO353_17590	0.60	-2.8
3,878,509	-		AO353_17590	0.60	-1.4
3,878,685	+		AO353_17590	0.86	-3.6
3,878,685	+		AO353_17590	0.86	-2.1
3,878,685	+		AO353_17590	0.86	-1.8
3,878,685	+		AO353_17590	0.86	-2.7
3,878,685	+		AO353_17590	0.86	-0.8
3,878,685	+		AO353_17590	0.86	-1.1
3,878,686	-		AO353_17590	0.86	-2.8
3,878,686	-		AO353_17590	0.86	-2.0
3,878,686	-		AO353_17590	0.86	-2.3
3,878,686	-		AO353_17590	0.86	-1.7
3,878,778	+				+0.0
3,878,778	+				-2.0
3,878,778	+				-3.3
3,878,778	+				-2.7
3,878,779	-				-2.7
3,878,779	-				-2.7
3,878,779	-				-2.4
3,878,779	-				-1.8
3,878,779	-				-1.3
3,878,779	-				-1.9
3,878,779	-				-3.4
3,878,779	-				-2.3
3,878,779	-				-1.7
3,878,864	-				-2.4
3,878,896	+				-2.2
3,878,896	+				-0.8
3,878,897	-				-1.2
3,878,897	-				-2.3
3,878,897	-				-3.6
3,878,980	+		AO353_17595	0.15	-1.5
3,878,980	+		AO353_17595	0.15	-1.0
3,878,980	+				-1.0
3,878,980	+		AO353_17595	0.15	-2.1
3,878,980	+		AO353_17595	0.15	-3.5
3,878,981	-		AO353_17595	0.15	-1.9
3,878,981	-		AO353_17595	0.15	+0.3
3,878,981	-		AO353_17595	0.15	-1.2
3,878,981	-		AO353_17595	0.15	-2.0
3,878,981	-		AO353_17595	0.15	-1.5
3,878,994	+		AO353_17595	0.16	-1.4
3,878,994	+		AO353_17595	0.16	-1.2
3,878,994	+		AO353_17595	0.16	-1.8
3,878,995	-		AO353_17595	0.16	-2.4
3,878,995	-		AO353_17595	0.16	-2.3
3,878,995	-		AO353_17595	0.16	-2.0
3,878,995	-		AO353_17595	0.16	-1.4
3,879,004	+		AO353_17595	0.17	-2.6
3,879,005	-		AO353_17595	0.17	-2.0
3,879,025	+		AO353_17595	0.18	-2.0
3,879,025	+		AO353_17595	0.18	-2.8
3,879,025	+		AO353_17595	0.18	-2.2
3,879,025	+		AO353_17595	0.18	-3.9
3,879,025	+		AO353_17595	0.18	-2.0
3,879,025	+		AO353_17595	0.18	-1.2
3,879,025	+		AO353_17595	0.18	-1.8
3,879,025	+		AO353_17595	0.18	-3.2
3,879,026	-		AO353_17595	0.18	-3.3
3,879,026	-		AO353_17595	0.18	-3.8
3,879,026	-		AO353_17595	0.18	-3.0
3,879,026	-		AO353_17595	0.18	-3.3
3,879,026	-		AO353_17595	0.18	-3.1
3,879,026	-		AO353_17595	0.18	-3.8
3,879,028	+		AO353_17595	0.18	-1.4
3,879,029	-		AO353_17595	0.18	-1.9
3,879,116	-		AO353_17595	0.25	-3.3
3,879,136	+		AO353_17595	0.26	-3.2
3,879,136	+		AO353_17595	0.26	-2.4
3,879,136	+		AO353_17595	0.26	-0.8
3,879,136	+		AO353_17595	0.26	-2.9
3,879,136	+		AO353_17595	0.26	-1.2
3,879,136	+		AO353_17595	0.26	-1.4
3,879,136	+		AO353_17595	0.26	-2.2
3,879,137	-		AO353_17595	0.26	-0.5
3,879,137	-		AO353_17595	0.26	-1.4
3,879,137	-		AO353_17595	0.26	-2.4
3,879,137	-		AO353_17595	0.26	-3.1
3,879,148	+				+0.2
3,879,148	+		AO353_17595	0.27	-1.4
3,879,149	-		AO353_17595	0.27	-2.5
3,879,149	-		AO353_17595	0.27	-1.3
3,879,149	-		AO353_17595	0.27	-1.0
3,879,149	-		AO353_17595	0.27	-2.7
3,879,149	-		AO353_17595	0.27	-1.1
3,879,149	-		AO353_17595	0.27	-2.3
3,879,425	+		AO353_17595	0.47	-2.4
3,879,425	+		AO353_17595	0.47	-3.8
3,879,426	-		AO353_17595	0.47	-2.0
3,879,426	-		AO353_17595	0.47	+0.8
3,879,426	-		AO353_17595	0.47	-3.1
3,879,561	+		AO353_17595	0.57	-3.2
3,879,562	-		AO353_17595	0.57	-2.6
3,879,562	-		AO353_17595	0.57	-3.0
3,879,578	+		AO353_17595	0.58	-3.3
3,879,578	+		AO353_17595	0.58	-2.2
3,879,578	+		AO353_17595	0.58	-0.9
3,879,579	-		AO353_17595	0.58	+2.2
3,879,615	+		AO353_17595	0.61	-2.2
3,879,615	+		AO353_17595	0.61	-3.7
3,879,615	+		AO353_17595	0.61	-1.4
3,879,615	+		AO353_17595	0.61	-3.4
3,879,615	+		AO353_17595	0.61	-0.8
3,879,616	-		AO353_17595	0.61	-2.8
3,879,616	-		AO353_17595	0.61	-2.4
3,879,616	-		AO353_17595	0.61	-2.3
3,879,616	-		AO353_17595	0.61	-4.2
3,879,616	-		AO353_17595	0.61	-2.2
3,880,015	+		AO353_17595	0.90	-1.7
3,880,024	-				-1.2
3,880,166	+				-1.1
3,880,166	+				-0.1
3,880,166	+				+0.3
3,880,166	+				-0.1
3,880,167	-				-0.2
3,880,186	+				-1.7
3,880,186	+				+1.1
3,880,186	+				+0.8
3,880,186	+				-0.3
3,880,187	-				+0.4
3,880,187	-				-1.6
3,880,187	-				-0.7
3,880,187	-				-0.1
3,880,187	-				-1.1
3,880,187	-				+0.6
3,880,187	-				-0.2
3,880,187	-				-1.0
3,880,187	-				+0.5
3,880,187	-				+0.6
3,880,253	-				-1.4
3,880,359	+				+0.0
3,880,359	+				+0.0
3,880,360	-				-0.8
3,880,360	-				+0.1
3,880,360	-				+1.4
3,880,360	-				+1.8
3,880,491	+		AO353_17600	0.17	+1.1
3,880,491	+		AO353_17600	0.17	-0.4
3,880,491	+		AO353_17600	0.17	+0.1
3,880,492	-		AO353_17600	0.17	-1.6
3,880,492	-		AO353_17600	0.17	+0.6
3,880,492	-		AO353_17600	0.17	+1.3
3,880,492	-		AO353_17600	0.17	+0.8
3,880,521	+		AO353_17600	0.20	+0.7
3,880,521	+		AO353_17600	0.20	+1.2
3,880,521	+		AO353_17600	0.20	-0.3
3,880,521	+		AO353_17600	0.20	-1.7
3,880,522	-		AO353_17600	0.20	-0.8
3,880,522	-		AO353_17600	0.20	+0.8
3,880,522	-		AO353_17600	0.20	-0.3
3,880,557	+		AO353_17600	0.25	+0.4
3,880,557	+		AO353_17600	0.25	+0.5
3,880,557	+		AO353_17600	0.25	-0.2
3,880,557	+		AO353_17600	0.25	+1.8
3,880,558	-		AO353_17600	0.25	+1.3
3,880,558	-		AO353_17600	0.25	-0.1
3,880,558	-		AO353_17600	0.25	-0.7
3,880,680	+		AO353_17600	0.40	-0.8
3,880,680	+		AO353_17600	0.40	+0.8
3,880,681	-		AO353_17600	0.40	-0.5
3,880,681	-		AO353_17600	0.40	+1.1
3,880,681	-		AO353_17600	0.40	+0.7
3,880,695	+		AO353_17600	0.41	-0.5
3,880,695	+		AO353_17600	0.41	-0.8
3,880,695	+		AO353_17600	0.41	-0.5
3,880,696	-		AO353_17600	0.41	+0.8
3,880,696	-		AO353_17600	0.41	+0.2
3,880,768	+		AO353_17600	0.50	+0.5
3,880,769	-		AO353_17600	0.50	+1.5
3,880,788	+		AO353_17600	0.53	+1.0
3,880,788	+		AO353_17600	0.53	+0.8
3,880,788	+		AO353_17600	0.53	-1.3
3,880,788	+		AO353_17600	0.53	+1.5
3,880,789	-		AO353_17600	0.53	+0.7
3,880,789	-		AO353_17600	0.53	-0.1
3,880,789	-		AO353_17600	0.53	-2.8
3,880,789	-		AO353_17600	0.53	-1.7
3,880,789	-		AO353_17600	0.53	-0.0
3,880,908	+		AO353_17600	0.67	-0.1
3,880,908	+		AO353_17600	0.67	-2.0
3,880,908	+		AO353_17600	0.67	+1.2
3,880,908	+		AO353_17600	0.67	+0.7
3,880,908	+		AO353_17600	0.67	-0.2
3,880,909	-		AO353_17600	0.67	-0.4
3,880,909	-		AO353_17600	0.67	+0.6
3,880,909	-		AO353_17600	0.67	-0.6
3,880,909	-		AO353_17600	0.67	-0.2
3,880,909	-		AO353_17600	0.67	-1.4
3,880,909	-		AO353_17600	0.67	+1.2
3,880,909	-		AO353_17600	0.67	+0.1
3,880,909	-		AO353_17600	0.67	+0.6
3,880,909	-		AO353_17600	0.67	-1.4
3,880,909	-		AO353_17600	0.67	+0.5
3,881,032	+		AO353_17600	0.82	+0.8
3,881,032	+		AO353_17600	0.82	+0.4
3,881,033	-		AO353_17600	0.82	+1.8
3,881,033	-		AO353_17600	0.82	+1.1
3,881,033	-		AO353_17600	0.82	-0.3
3,881,033	-		AO353_17600	0.82	-0.7
3,881,033	-		AO353_17600	0.82	-1.4