Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17580

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,874,574	+		AO353_17570	0.71	-2.3
3,874,574	+		AO353_17570	0.71	-0.8
3,874,575	-		AO353_17570	0.71	-0.8
3,874,786	-		AO353_17570	0.85	-0.9
3,874,811	+		AO353_17570	0.86	-1.3
3,874,811	+		AO353_17570	0.86	-2.0
3,874,967	+				-0.7
3,874,967	+				-4.9
3,874,967	+				-2.1
3,874,967	+				-2.2
3,874,967	+				-0.7
3,874,967	+				-2.4
3,874,967	+				-2.3
3,874,967	+				-1.4
3,874,967	+				-2.9
3,874,967	+				-2.5
3,874,967	+				-1.5
3,874,967	+				-3.1
3,874,968	-				-0.6
3,874,968	-				-2.4
3,874,968	-				-1.7
3,874,968	-				-2.9
3,874,968	-				-3.2
3,874,968	-				-0.8
3,874,968	-				-2.2
3,874,968	-				-2.9
3,874,968	-				-0.7
3,874,968	-				-2.6
3,874,968	-				-2.6
3,874,968	-				-1.5
3,874,968	-				-1.4
3,875,003	+				-1.8
3,875,003	+				-1.9
3,875,004	-				-2.6
3,875,004	-				-1.5
3,875,004	-				-1.4
3,875,004	-				-3.4
3,875,007	+				-1.8
3,875,008	-				-1.0
3,875,008	-				-1.2
3,875,020	-				-2.8
3,875,020	-				-2.2
3,875,088	+		AO353_17575	0.15	-2.8
3,875,088	+		AO353_17575	0.15	-3.0
3,875,088	+		AO353_17575	0.15	-0.4
3,875,088	+		AO353_17575	0.15	-2.6
3,875,088	+		AO353_17575	0.15	-2.4
3,875,088	+		AO353_17575	0.15	-2.2
3,875,088	+		AO353_17575	0.15	-2.6
3,875,089	-		AO353_17575	0.15	-2.2
3,875,089	-		AO353_17575	0.15	-5.2
3,875,089	-		AO353_17575	0.15	-1.8
3,875,089	-		AO353_17575	0.15	-1.9
3,875,089	-		AO353_17575	0.15	-0.0
3,875,089	-		AO353_17575	0.15	-2.4
3,875,089	-		AO353_17575	0.15	-1.8
3,875,089	-		AO353_17575	0.15	-1.3
3,875,145	+		AO353_17575	0.27	-0.5
3,875,145	+		AO353_17575	0.27	-2.0
3,875,242	+		AO353_17575	0.48	-1.5
3,875,242	+		AO353_17575	0.48	-1.2
3,875,322	+		AO353_17575	0.66	-2.4
3,875,322	+		AO353_17575	0.66	-1.7
3,875,322	+		AO353_17575	0.66	-2.7
3,875,322	+		AO353_17575	0.66	-2.8
3,875,322	+		AO353_17575	0.66	-1.8
3,875,322	+		AO353_17575	0.66	-1.4
3,875,322	+		AO353_17575	0.66	-3.2
3,875,322	+		AO353_17575	0.66	-2.8
3,875,322	+		AO353_17575	0.66	-3.1
3,875,322	+		AO353_17575	0.66	-2.3
3,875,322	+		AO353_17575	0.66	-2.0
3,875,322	+		AO353_17575	0.66	-3.3
3,875,322	+		AO353_17575	0.66	-4.2
3,875,322	+		AO353_17575	0.66	-1.2
3,875,322	+		AO353_17575	0.66	-1.2
3,875,322	+		AO353_17575	0.66	-4.0
3,875,322	+		AO353_17575	0.66	-3.4
3,875,322	+		AO353_17575	0.66	-3.5
3,875,322	+		AO353_17575	0.66	-2.1
3,875,322	+		AO353_17575	0.66	-1.9
3,875,323	-		AO353_17575	0.66	+0.8
3,875,323	-		AO353_17575	0.66	-2.4
3,875,323	-		AO353_17575	0.66	-1.4
3,875,323	-		AO353_17575	0.66	-1.5
3,875,323	-		AO353_17575	0.66	-2.4
3,875,323	-		AO353_17575	0.66	-3.9
3,875,323	-		AO353_17575	0.66	-3.0
3,875,323	-		AO353_17575	0.66	-2.2
3,875,323	-		AO353_17575	0.66	-3.2
3,875,323	-		AO353_17575	0.66	-2.3
3,875,388	+		AO353_17575	0.80	-1.4
3,875,389	-		AO353_17575	0.80	-3.3
3,875,464	+				-1.5
3,875,465	-				-2.5
3,875,471	+				-2.2
3,875,471	+				-2.2
3,875,471	+				-2.2
3,875,471	+				-3.2
3,875,471	+				-3.1
3,875,471	+				-1.2
3,875,471	+				-1.5
3,875,471	+				-0.2
3,875,472	-				-3.2
3,875,472	-				-1.2
3,875,472	-				-0.7
3,875,472	-				-2.4
3,875,472	-				-1.8
3,875,472	-				-0.0
3,875,472	-				-1.0
3,875,472	-				-1.9
3,875,472	-				-2.4
3,875,472	-				-2.3
3,875,472	-				-2.4
3,875,472	-				-2.9
3,875,472	-				-2.0
3,875,472	-				-0.8
3,875,472	-				-0.2
3,875,472	-				-2.8
3,875,540	-				+0.1
3,875,575	+				-1.8
3,875,576	-				-4.1
3,875,576	-				-3.1
3,875,576	-				-0.4
3,875,583	+				-1.2
3,875,599	+				-2.7
3,875,599	+				-3.1
3,875,599	+				-1.5
3,875,599	+				-3.8
3,875,599	+				-2.3
3,875,599	+				-1.9
3,875,713	+		AO353_17580	0.18	-2.9
3,875,714	-		AO353_17580	0.18	-1.8
3,875,714	-		AO353_17580	0.18	-1.7
3,875,743	+		AO353_17580	0.21	-0.6
3,875,743	+		AO353_17580	0.21	-3.2
3,875,776	+		AO353_17580	0.24	-2.9
3,875,777	-		AO353_17580	0.24	-3.7
3,875,936	+		AO353_17580	0.40	-2.9
3,875,968	+		AO353_17580	0.43	-1.9
3,875,969	-		AO353_17580	0.44	-1.4
3,876,063	+		AO353_17580	0.53	-1.5
3,876,063	+		AO353_17580	0.53	-2.4
3,876,063	+		AO353_17580	0.53	-4.0
3,876,063	+		AO353_17580	0.53	-0.6
3,876,063	+		AO353_17580	0.53	-3.3
3,876,063	+		AO353_17580	0.53	-1.4
3,876,063	+		AO353_17580	0.53	-3.6
3,876,063	+		AO353_17580	0.53	-1.2
3,876,063	+		AO353_17580	0.53	-2.8
3,876,064	-		AO353_17580	0.53	+1.8
3,876,064	-		AO353_17580	0.53	-2.2
3,876,064	-		AO353_17580	0.53	-2.4
3,876,064	-		AO353_17580	0.53	-2.4
3,876,064	-		AO353_17580	0.53	-1.2
3,876,064	-		AO353_17580	0.53	-2.1
3,876,115	+		AO353_17580	0.58	-2.2
3,876,115	+		AO353_17580	0.58	-2.9
3,876,115	+		AO353_17580	0.58	-2.9
3,876,116	-		AO353_17580	0.58	-3.0
3,876,148	+		AO353_17580	0.62	-1.0
3,876,148	+		AO353_17580	0.62	-0.9
3,876,148	+		AO353_17580	0.62	-3.5
3,876,148	+		AO353_17580	0.62	-1.9
3,876,148	+		AO353_17580	0.62	-1.9
3,876,149	-		AO353_17580	0.62	-4.0
3,876,149	-		AO353_17580	0.62	-1.0
3,876,292	+		AO353_17580	0.76	-3.6
3,876,292	+		AO353_17580	0.76	-2.4
3,876,292	+		AO353_17580	0.76	-4.2
3,876,292	+		AO353_17580	0.76	+0.6
3,876,292	+		AO353_17580	0.76	-3.2
3,876,292	+		AO353_17580	0.76	-1.7
3,876,293	-		AO353_17580	0.76	-2.1
3,876,293	-		AO353_17580	0.76	-2.9
3,876,293	-		AO353_17580	0.76	-0.8
3,876,293	-		AO353_17580	0.76	-1.4
3,876,322	+		AO353_17580	0.79	-1.7
3,876,322	+		AO353_17580	0.79	-0.5
3,876,322	+		AO353_17580	0.79	-2.5
3,876,322	+		AO353_17580	0.79	-4.3
3,876,322	+		AO353_17580	0.79	-0.9
3,876,323	-		AO353_17580	0.79	-3.1
3,876,323	-		AO353_17580	0.79	-1.9
3,876,323	-		AO353_17580	0.79	-2.9
3,876,323	-		AO353_17580	0.79	-1.9
3,876,323	-		AO353_17580	0.79	-3.3
3,876,323	-		AO353_17580	0.79	-3.5
3,876,509	+				-0.4
3,876,510	-				-0.4
3,876,510	-				-2.3
3,876,519	+				-1.9
3,876,519	+				-2.4
3,876,519	+				-2.3
3,876,519	+				-1.6
3,876,519	+				-3.8
3,876,519	+				-1.5
3,876,519	+				-2.3
3,876,519	+				-2.4
3,876,519	+				-2.5
3,876,520	-				-3.0
3,876,520	-				-1.8
3,876,520	-				-1.7
3,876,520	-				-1.9
3,876,520	-				-3.1
3,876,520	-				-4.1
3,876,520	-				-2.4
3,876,520	-				-1.6
3,876,520	-				-2.3
3,876,520	-				-3.4
3,876,557	+				-1.0
3,876,557	+				-2.1
3,876,557	+				-1.5
3,876,558	-				+0.6
3,876,558	-				+0.7
3,876,558	-				+1.8
3,876,583	+				-1.5
3,876,583	+				-0.4
3,876,583	+				-3.5
3,876,583	+				-2.1
3,876,583	+				-1.7
3,876,583	+				-1.4
3,876,583	+				-0.5
3,876,584	-				+0.7
3,876,601	+				-0.5
3,876,601	+				-1.7
3,876,601	+				-2.4
3,876,601	+				-0.8
3,876,601	+				-2.4
3,876,601	+				+0.8
3,876,601	+				-1.7
3,876,602	-				+0.8
3,876,602	-				+0.5
3,876,602	-				+0.7
3,876,602	-				+0.1
3,876,602	-				+0.6
3,876,602	-				+0.4
3,876,643	+				-2.4
3,876,643	+				-1.0
3,876,643	+				-1.5
3,876,644	-				-0.8
3,876,644	-				+1.0
3,876,644	-				-0.2
3,876,644	-				-1.0
3,876,644	-				+1.1
3,876,644	-				-1.5
3,876,655	+				+0.2
3,876,656	-				+0.4
3,876,656	-				-0.3
3,876,656	-				-0.0
3,876,712	+		AO353_17585	0.10	-1.4
3,876,712	+		AO353_17585	0.10	-3.3
3,876,712	+		AO353_17585	0.10	-2.4
3,876,712	+		AO353_17585	0.10	-1.8
3,876,712	+		AO353_17585	0.10	-1.2
3,876,712	+		AO353_17585	0.10	-1.9
3,876,712	+		AO353_17585	0.10	-2.3
3,876,712	+		AO353_17585	0.10	-1.6
3,876,712	+		AO353_17585	0.10	-2.0
3,876,712	+		AO353_17585	0.10	-2.8
3,876,713	-		AO353_17585	0.10	-2.4
3,876,713	-		AO353_17585	0.10	-0.1
3,876,713	-		AO353_17585	0.10	+0.3
3,876,713	-		AO353_17585	0.10	-0.0
3,876,713	-		AO353_17585	0.10	-0.6
3,876,787	+		AO353_17585	0.16	-2.7
3,876,787	+		AO353_17585	0.16	-2.8
3,876,787	+		AO353_17585	0.16	-3.3
3,876,788	-		AO353_17585	0.16	-2.5
3,876,788	-		AO353_17585	0.16	+0.6
3,876,788	-		AO353_17585	0.16	-0.4
3,876,788	-		AO353_17585	0.16	+0.4
3,876,788	-		AO353_17585	0.16	-0.2
3,876,835	+		AO353_17585	0.20	-1.8
3,876,835	+		AO353_17585	0.20	-3.7
3,876,928	+		AO353_17585	0.27	-2.9
3,876,929	-		AO353_17585	0.27	-1.6
3,876,929	-		AO353_17585	0.27	-2.1
3,876,929	-		AO353_17585	0.27	-0.1
3,876,929	-		AO353_17585	0.27	-1.5
3,876,929	-		AO353_17585	0.27	-1.1
3,876,929	-		AO353_17585	0.27	+0.6
3,876,977	+		AO353_17585	0.31	+0.2
3,876,977	+		AO353_17585	0.31	-1.5
3,876,978	-		AO353_17585	0.31	-1.8
3,876,978	-		AO353_17585	0.31	+0.2
3,876,978	-		AO353_17585	0.31	-1.4
3,876,994	+		AO353_17585	0.32	-2.4
3,876,994	+		AO353_17585	0.32	-2.6
3,876,994	+		AO353_17585	0.32	-2.7
3,876,994	+		AO353_17585	0.32	-1.7
3,876,995	-		AO353_17585	0.32	-2.8
3,876,995	-		AO353_17585	0.32	-2.4
3,876,995	-		AO353_17585	0.32	-1.4
3,877,141	+		AO353_17585	0.43	-1.9
3,877,141	+		AO353_17585	0.43	-1.0
3,877,141	+		AO353_17585	0.43	-3.4
3,877,141	+		AO353_17585	0.43	-2.7
3,877,142	-		AO353_17585	0.43	-0.8
3,877,168	+		AO353_17585	0.45	-3.2
3,877,198	+		AO353_17585	0.48	-2.4
3,877,198	+		AO353_17585	0.48	-2.1
3,877,198	+		AO353_17585	0.48	-1.2
3,877,198	+		AO353_17585	0.48	-4.3
3,877,199	-		AO353_17585	0.48	-1.2
3,877,495	+		AO353_17585	0.71	-3.1
3,877,495	+		AO353_17585	0.71	-1.9
3,877,495	+		AO353_17585	0.71	-2.4
3,877,495	+		AO353_17585	0.71	-3.8
3,877,496	-		AO353_17585	0.71	-2.8
3,877,496	-		AO353_17585	0.71	-2.4
3,877,496	-		AO353_17585	0.71	-0.0
3,877,496	-		AO353_17585	0.71	-1.0