Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04175 and AO353_04180 are separated by 77 nucleotides AO353_04180 and AO353_04185 are separated by 95 nucleotides
AO353_04175: AO353_04175 - glycerol uptake facilitator GlpF, at 894,754 to 895,605
_04175
AO353_04180: AO353_04180 - glycerol kinase, at 895,683 to 897,188
_04180
AO353_04185: AO353_04185 - DeoR family transcriptional regulator, at 897,284 to 898,039
_04185
Position (kb) 895
896
897
898 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 894.821 kb on + strand at 894.931 kb on + strand, within AO353_04175 at 894.932 kb on - strand, within AO353_04175 at 894.993 kb on - strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.014 kb on + strand, within AO353_04175 at 895.015 kb on - strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.027 kb on + strand, within AO353_04175 at 895.028 kb on - strand, within AO353_04175 at 895.075 kb on + strand, within AO353_04175 at 895.085 kb on - strand, within AO353_04175 at 895.336 kb on - strand, within AO353_04175 at 895.392 kb on + strand, within AO353_04175 at 895.449 kb on + strand, within AO353_04175 at 895.538 kb on + strand at 895.538 kb on + strand at 895.539 kb on - strand at 895.550 kb on + strand at 895.550 kb on + strand at 895.550 kb on + strand at 895.557 kb on + strand at 895.557 kb on + strand at 895.557 kb on + strand at 895.558 kb on - strand at 895.558 kb on - strand at 895.558 kb on - strand at 895.661 kb on + strand at 895.661 kb on + strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.662 kb on - strand at 895.700 kb on + strand at 895.700 kb on + strand at 895.701 kb on - strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.707 kb on + strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.708 kb on - strand at 895.986 kb on + strand, within AO353_04180 at 895.986 kb on + strand, within AO353_04180 at 895.987 kb on - strand, within AO353_04180 at 895.987 kb on - strand, within AO353_04180 at 895.987 kb on - strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.061 kb on + strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.062 kb on - strand, within AO353_04180 at 896.097 kb on + strand, within AO353_04180 at 896.097 kb on + strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.098 kb on - strand, within AO353_04180 at 896.241 kb on + strand, within AO353_04180 at 896.241 kb on + strand, within AO353_04180 at 896.241 kb on + strand, within AO353_04180 at 896.242 kb on - strand, within AO353_04180 at 896.242 kb on - strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.364 kb on + strand, within AO353_04180 at 896.365 kb on - strand, within AO353_04180 at 896.469 kb on + strand, within AO353_04180 at 896.470 kb on - strand, within AO353_04180 at 896.470 kb on - strand, within AO353_04180 at 896.517 kb on - strand, within AO353_04180 at 896.517 kb on - strand, within AO353_04180 at 896.574 kb on + strand, within AO353_04180 at 896.575 kb on - strand, within AO353_04180 at 896.575 kb on - strand, within AO353_04180 at 896.667 kb on + strand, within AO353_04180 at 896.667 kb on + strand, within AO353_04180 at 896.667 kb on + strand, within AO353_04180 at 896.668 kb on - strand, within AO353_04180 at 896.668 kb on - strand, within AO353_04180 at 896.668 kb on - strand, within AO353_04180 at 896.668 kb on - strand, within AO353_04180 at 896.703 kb on + strand, within AO353_04180 at 896.703 kb on + strand, within AO353_04180 at 896.703 kb on + strand, within AO353_04180 at 896.703 kb on + strand, within AO353_04180 at 896.704 kb on - strand, within AO353_04180 at 896.704 kb on - strand, within AO353_04180 at 896.789 kb on - strand, within AO353_04180 at 896.789 kb on - strand, within AO353_04180 at 896.848 kb on + strand, within AO353_04180 at 896.848 kb on + strand, within AO353_04180 at 896.849 kb on - strand, within AO353_04180 at 896.899 kb on + strand, within AO353_04180 at 896.900 kb on - strand, within AO353_04180 at 897.009 kb on + strand, within AO353_04180 at 897.009 kb on + strand at 897.009 kb on + strand, within AO353_04180 at 897.123 kb on + strand at 897.123 kb on + strand at 897.195 kb on + strand at 897.196 kb on - strand at 897.196 kb on - strand at 897.212 kb on + strand at 897.212 kb on + strand at 897.212 kb on + strand at 897.212 kb on + strand at 897.213 kb on - strand at 897.213 kb on - strand at 897.213 kb on - strand at 897.213 kb on - strand at 897.216 kb on + strand at 897.216 kb on + strand at 897.216 kb on + strand at 897.216 kb on + strand at 897.217 kb on - strand at 897.217 kb on - strand at 897.217 kb on - strand at 897.217 kb on - strand at 897.217 kb on - strand at 897.217 kb on - strand at 897.217 kb on - strand at 897.217 kb on - strand at 897.224 kb on - strand at 897.238 kb on + strand at 897.284 kb on - strand at 897.284 kb on - strand at 897.338 kb on + strand at 897.366 kb on + strand, within AO353_04185 at 897.366 kb on + strand, within AO353_04185 at 897.366 kb on + strand, within AO353_04185 at 897.366 kb on + strand, within AO353_04185 at 897.366 kb on + strand, within AO353_04185 at 897.366 kb on + strand, within AO353_04185 at 897.366 kb on + strand, within AO353_04185 at 897.367 kb on - strand, within AO353_04185 at 897.367 kb on - strand, within AO353_04185 at 897.367 kb on - strand, within AO353_04185 at 897.367 kb on - strand, within AO353_04185 at 897.376 kb on + strand, within AO353_04185 at 897.376 kb on + strand, within AO353_04185 at 897.377 kb on - strand, within AO353_04185 at 897.377 kb on - strand, within AO353_04185 at 897.377 kb on - strand, within AO353_04185 at 897.400 kb on + strand, within AO353_04185 at 897.401 kb on - strand, within AO353_04185 at 897.455 kb on + strand, within AO353_04185 at 897.482 kb on + strand, within AO353_04185 at 897.482 kb on + strand, within AO353_04185 at 897.647 kb on - strand, within AO353_04185 at 897.846 kb on + strand, within AO353_04185 at 897.847 kb on - strand, within AO353_04185 at 897.847 kb on - strand, within AO353_04185 at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.167 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 894,821 + -1.6 894,931 + AO353_04175 0.21 -0.3 894,932 - AO353_04175 0.21 -0.8 894,993 - AO353_04175 0.28 -1.7 895,014 + AO353_04175 0.31 -1.7 895,014 + AO353_04175 0.31 -0.7 895,014 + AO353_04175 0.31 -1.7 895,014 + AO353_04175 0.31 +0.7 895,015 - AO353_04175 0.31 -2.2 895,027 + AO353_04175 0.32 -0.9 895,027 + AO353_04175 0.32 -0.3 895,027 + AO353_04175 0.32 -0.1 895,027 + AO353_04175 0.32 -1.6 895,028 - AO353_04175 0.32 -0.1 895,075 + AO353_04175 0.38 -2.0 895,085 - AO353_04175 0.39 -2.0 895,336 - AO353_04175 0.68 +0.3 895,392 + AO353_04175 0.75 -1.5 895,449 + AO353_04175 0.82 -0.1 895,538 + -1.0 895,538 + +0.1 895,539 - -1.7 895,550 + +0.1 895,550 + -1.4 895,550 + -2.0 895,557 + +0.2 895,557 + +0.7 895,557 + -2.2 895,558 - -1.1 895,558 - -0.0 895,558 - -1.6 895,661 + -1.7 895,661 + -2.6 895,662 - -0.7 895,662 - -1.0 895,662 - -1.5 895,662 - -1.1 895,662 - -0.4 895,700 + -0.1 895,700 + -1.2 895,701 - -1.9 895,707 + -2.1 895,707 + -1.2 895,707 + -1.5 895,707 + -0.7 895,707 + -3.1 895,707 + -0.6 895,707 + +0.3 895,707 + -1.4 895,707 + -2.1 895,707 + -1.6 895,707 + -0.0 895,708 - -0.3 895,708 - -1.3 895,708 - -1.6 895,708 - -2.3 895,708 - -0.5 895,708 - +0.9 895,708 - -0.4 895,708 - -0.4 895,986 + AO353_04180 0.20 -0.2 895,986 + AO353_04180 0.20 -0.6 895,987 - AO353_04180 0.20 -1.2 895,987 - AO353_04180 0.20 -0.7 895,987 - AO353_04180 0.20 +0.2 896,061 + AO353_04180 0.25 -0.3 896,061 + AO353_04180 0.25 -0.7 896,061 + AO353_04180 0.25 -1.8 896,061 + AO353_04180 0.25 -1.8 896,061 + AO353_04180 0.25 -2.4 896,061 + AO353_04180 0.25 -1.0 896,061 + AO353_04180 0.25 -0.8 896,061 + AO353_04180 0.25 -0.9 896,061 + AO353_04180 0.25 -1.4 896,061 + AO353_04180 0.25 -0.1 896,061 + AO353_04180 0.25 -2.0 896,061 + AO353_04180 0.25 +0.5 896,062 - AO353_04180 0.25 -1.1 896,062 - AO353_04180 0.25 -1.3 896,062 - AO353_04180 0.25 +0.7 896,062 - AO353_04180 0.25 -2.7 896,062 - -0.1 896,062 - AO353_04180 0.25 -0.7 896,062 - AO353_04180 0.25 +0.2 896,062 - AO353_04180 0.25 -0.3 896,062 - AO353_04180 0.25 -2.5 896,062 - AO353_04180 0.25 -3.3 896,097 + AO353_04180 0.27 -1.2 896,097 + AO353_04180 0.27 -0.9 896,098 - AO353_04180 0.28 -2.7 896,098 - AO353_04180 0.28 -1.1 896,098 - AO353_04180 0.28 +0.9 896,098 - AO353_04180 0.28 -0.4 896,241 + AO353_04180 0.37 -2.2 896,241 + AO353_04180 0.37 -2.6 896,241 + AO353_04180 0.37 -2.3 896,242 - AO353_04180 0.37 -0.4 896,242 - AO353_04180 0.37 -2.3 896,364 + AO353_04180 0.45 +1.6 896,364 + AO353_04180 0.45 -0.4 896,364 + AO353_04180 0.45 -0.9 896,364 + AO353_04180 0.45 -1.3 896,365 - AO353_04180 0.45 +0.9 896,469 + AO353_04180 0.52 +0.1 896,470 - AO353_04180 0.52 -2.2 896,470 - AO353_04180 0.52 -1.3 896,517 - AO353_04180 0.55 -2.0 896,517 - AO353_04180 0.55 -0.2 896,574 + AO353_04180 0.59 -1.9 896,575 - AO353_04180 0.59 -1.3 896,575 - AO353_04180 0.59 -0.0 896,667 + AO353_04180 0.65 -0.8 896,667 + AO353_04180 0.65 -0.3 896,667 + AO353_04180 0.65 -0.1 896,668 - AO353_04180 0.65 -1.3 896,668 - AO353_04180 0.65 -1.3 896,668 - AO353_04180 0.65 -1.3 896,668 - AO353_04180 0.65 -0.7 896,703 + AO353_04180 0.68 -2.5 896,703 + AO353_04180 0.68 -2.1 896,703 + AO353_04180 0.68 -0.9 896,703 + AO353_04180 0.68 +0.0 896,704 - AO353_04180 0.68 -1.6 896,704 - AO353_04180 0.68 -1.3 896,789 - AO353_04180 0.73 -0.9 896,789 - AO353_04180 0.73 -1.3 896,848 + AO353_04180 0.77 +0.3 896,848 + AO353_04180 0.77 +2.5 896,849 - AO353_04180 0.77 -0.7 896,899 + AO353_04180 0.81 -0.3 896,900 - AO353_04180 0.81 +0.2 897,009 + AO353_04180 0.88 -2.2 897,009 + -0.7 897,009 + AO353_04180 0.88 -0.4 897,123 + -2.1 897,123 + -0.3 897,195 + +0.3 897,196 - +0.6 897,196 - -1.3 897,212 + -0.1 897,212 + +0.5 897,212 + +0.5 897,212 + +0.4 897,213 - -0.6 897,213 - +0.6 897,213 - -0.9 897,213 - +0.2 897,216 + -0.8 897,216 + -0.7 897,216 + -0.6 897,216 + +0.3 897,217 - +2.1 897,217 - -0.4 897,217 - -0.4 897,217 - +0.6 897,217 - +0.2 897,217 - +1.9 897,217 - +1.5 897,217 - +1.4 897,224 - +1.6 897,238 + -0.5 897,284 - +0.2 897,284 - +0.9 897,338 + +0.7 897,366 + AO353_04185 0.11 -0.5 897,366 + AO353_04185 0.11 +0.9 897,366 + AO353_04185 0.11 +0.1 897,366 + AO353_04185 0.11 +0.1 897,366 + AO353_04185 0.11 +0.6 897,366 + AO353_04185 0.11 -1.2 897,366 + AO353_04185 0.11 +0.3 897,367 - AO353_04185 0.11 +2.1 897,367 - AO353_04185 0.11 -1.0 897,367 - AO353_04185 0.11 +0.7 897,367 - AO353_04185 0.11 +0.2 897,376 + AO353_04185 0.12 +0.4 897,376 + AO353_04185 0.12 -0.4 897,377 - AO353_04185 0.12 +0.1 897,377 - AO353_04185 0.12 +0.4 897,377 - AO353_04185 0.12 -0.7 897,400 + AO353_04185 0.15 +0.2 897,401 - AO353_04185 0.15 +1.7 897,455 + AO353_04185 0.23 +0.1 897,482 + AO353_04185 0.26 -0.8 897,482 + AO353_04185 0.26 +0.3 897,647 - AO353_04185 0.48 -0.1 897,846 + AO353_04185 0.74 -0.1 897,847 - AO353_04185 0.74 +1.3 897,847 - AO353_04185 0.74 +1.3 898,045 + -0.3 898,045 + -0.0 898,045 + +0.7 898,045 + -0.4 898,045 + -0.2 898,045 + -0.7 898,045 + +0.0 898,045 + +0.2 898,045 + +0.4 898,045 + +1.6 898,045 + -0.8 898,046 - +0.6 898,046 - -0.6 898,046 - -0.4 898,046 - -0.1 898,046 - -0.9 898,167 - +0.2
Or see this region's nucleotide sequence