Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09535

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
2,055,209	+				+0.2
2,055,209	+				-0.2
2,055,209	+				+0.1
2,055,209	+				+0.1
2,055,209	+				+1.4
2,055,209	+				+0.2
2,055,209	+				-0.9
2,055,209	+				+1.2
2,055,209	+				+2.1
2,055,209	+				-0.2
2,055,210	-				-0.6
2,055,210	-				-2.2
2,055,210	-				+0.8
2,055,210	-				+0.3
2,055,210	-				-1.2
2,055,210	-				+0.6
2,055,210	-				+1.0
2,055,210	-				+0.0
2,055,214	-				-0.0
2,055,368	+		ABIE51_RS09530	0.22	-0.5
2,055,368	+		ABIE51_RS09530	0.22	+0.3
2,055,368	+		ABIE51_RS09530	0.22	+2.3
2,055,368	+		ABIE51_RS09530	0.22	-0.6
2,055,551	+		ABIE51_RS09530	0.45	-0.2
2,055,552	-		ABIE51_RS09530	0.45	-0.4
2,055,552	-		ABIE51_RS09530	0.45	+1.0
2,055,614	+		ABIE51_RS09530	0.52	+0.3
2,055,614	+		ABIE51_RS09530	0.52	+0.3
2,055,677	+		ABIE51_RS09530	0.60	+0.2
2,055,677	+		ABIE51_RS09530	0.60	+0.3
2,055,677	+		ABIE51_RS09530	0.60	+0.4
2,055,678	-		ABIE51_RS09530	0.60	-0.2
2,055,678	-		ABIE51_RS09530	0.60	+0.5
2,055,678	-		ABIE51_RS09530	0.60	+1.1
2,055,693	-		ABIE51_RS09530	0.62	+0.9
2,055,713	+		ABIE51_RS09530	0.64	-1.2
2,055,714	-		ABIE51_RS09530	0.64	+1.0
2,055,714	-		ABIE51_RS09530	0.64	+0.5
2,055,714	-		ABIE51_RS09530	0.64	+1.0
2,055,852	-		ABIE51_RS09530	0.81	-2.2
2,055,940	+				-1.4
2,055,940	+				+1.1
2,055,940	+				-0.9
2,055,940	+				+0.2
2,055,941	-				-1.5
2,055,941	-				+0.2
2,055,941	-				-1.0
2,056,057	-				-0.4
2,056,061	+				-1.0
2,056,061	+				-0.5
2,056,061	+				-0.3
2,056,061	+				-0.2
2,056,061	+				-0.3
2,056,061	+				-0.8
2,056,062	-				-0.8
2,056,062	-				-0.5
2,056,062	-				+0.2
2,056,062	-				+0.9
2,056,062	-				+0.0
2,056,062	-				+0.0
2,056,062	-				-0.2
2,056,062	-				+0.1
2,056,062	-				-0.1
2,056,112	+				-2.1
2,056,112	+				-0.5
2,056,112	+				-1.8
2,056,112	+				+0.2
2,056,112	+				-0.6
2,056,112	+				-2.0
2,056,113	-				-0.6
2,056,113	-				+0.5
2,056,113	-				-0.7
2,056,113	-				+0.2
2,056,126	+				-0.4
2,056,126	+				+0.5
2,056,127	-				-0.5
2,056,128	+				-1.4
2,056,209	+		ABIE51_RS09535	0.13	+0.1
2,056,209	+		ABIE51_RS09535	0.13	-0.5
2,056,209	+		ABIE51_RS09535	0.13	-0.2
2,056,209	+		ABIE51_RS09535	0.13	-0.3
2,056,209	+		ABIE51_RS09535	0.13	-0.1
2,056,210	-		ABIE51_RS09535	0.13	-1.4
2,056,210	-		ABIE51_RS09535	0.13	+0.4
2,056,210	-		ABIE51_RS09535	0.13	+0.1
2,056,210	-		ABIE51_RS09535	0.13	+2.3
2,056,210	-		ABIE51_RS09535	0.13	+0.4
2,056,272	+		ABIE51_RS09535	0.25	+0.3
2,056,272	+		ABIE51_RS09535	0.25	+0.3
2,056,272	+		ABIE51_RS09535	0.25	+0.4
2,056,272	+		ABIE51_RS09535	0.25	-2.0
2,056,272	+		ABIE51_RS09535	0.25	+0.0
2,056,273	-		ABIE51_RS09535	0.25	-0.4
2,056,273	-		ABIE51_RS09535	0.25	-0.2
2,056,273	-		ABIE51_RS09535	0.25	-0.3
2,056,273	-		ABIE51_RS09535	0.25	+0.6
2,056,273	-		ABIE51_RS09535	0.25	+0.3
2,056,273	-		ABIE51_RS09535	0.25	-1.4
2,056,273	-		ABIE51_RS09535	0.25	+0.1
2,056,273	-		ABIE51_RS09535	0.25	-0.2
2,056,273	-		ABIE51_RS09535	0.25	+0.5
2,056,332	+		ABIE51_RS09535	0.37	-0.3
2,056,332	+		ABIE51_RS09535	0.37	-0.4
2,056,333	-		ABIE51_RS09535	0.37	+0.0
2,056,333	-		ABIE51_RS09535	0.37	+0.9
2,056,333	-		ABIE51_RS09535	0.37	-0.8
2,056,333	-		ABIE51_RS09535	0.37	-0.5
2,056,357	-		ABIE51_RS09535	0.42	-0.3
2,056,357	-		ABIE51_RS09535	0.42	+0.7
2,056,357	-		ABIE51_RS09535	0.42	-0.5
2,056,401	+		ABIE51_RS09535	0.50	+0.9
2,056,401	+		ABIE51_RS09535	0.50	-0.5
2,056,401	+		ABIE51_RS09535	0.50	-0.7
2,056,401	+		ABIE51_RS09535	0.50	-3.5
2,056,402	-		ABIE51_RS09535	0.50	+0.0
2,056,413	+		ABIE51_RS09535	0.53	-1.0
2,056,413	+		ABIE51_RS09535	0.53	-1.9
2,056,414	-		ABIE51_RS09535	0.53	+0.3
2,056,414	-		ABIE51_RS09535	0.53	+0.0
2,056,449	+		ABIE51_RS09535	0.60	+0.3
2,056,449	+		ABIE51_RS09535	0.60	-0.8
2,056,449	+		ABIE51_RS09535	0.60	-0.2
2,056,450	-		ABIE51_RS09535	0.60	-1.0
2,056,450	-		ABIE51_RS09535	0.60	+0.3
2,056,485	+		ABIE51_RS09535	0.67	-0.2
2,056,485	+		ABIE51_RS09535	0.67	-0.3
2,056,485	+		ABIE51_RS09535	0.67	-0.2
2,056,485	+		ABIE51_RS09535	0.67	-0.5
2,056,486	-		ABIE51_RS09535	0.67	+0.3
2,056,486	-		ABIE51_RS09535	0.67	+0.7
2,056,486	-		ABIE51_RS09535	0.67	+0.3
2,056,486	-		ABIE51_RS09535	0.67	-0.8
2,056,486	-		ABIE51_RS09535	0.67	-0.2
2,056,486	-		ABIE51_RS09535	0.67	-0.5
2,056,554	+		ABIE51_RS09535	0.80	-2.0
2,056,554	+		ABIE51_RS09535	0.80	+0.6
2,056,555	-		ABIE51_RS09535	0.80	+1.8
2,056,555	-		ABIE51_RS09535	0.80	-0.0
2,056,558	+		ABIE51_RS09535	0.81	+0.4
2,056,559	-		ABIE51_RS09535	0.81	-1.9
2,056,559	-		ABIE51_RS09535	0.81	+0.4
2,056,559	-		ABIE51_RS09535	0.81	-0.5
2,056,607	+				-1.3
2,056,891	+				-0.4
2,056,891	+				-0.2
2,056,891	+				-1.7
2,056,892	-				-0.6
2,057,086	-				+0.5
2,057,098	+				-1.3
2,057,098	+				-0.6
2,057,486	+		ABIE51_RS09550	0.69	-0.5
2,057,487	-		ABIE51_RS09550	0.69	+0.2
2,057,487	-		ABIE51_RS09550	0.69	-1.1
2,057,487	-		ABIE51_RS09550	0.69	-0.2
2,057,487	-		ABIE51_RS09550	0.69	-0.6
2,057,544	-		ABIE51_RS09550	0.80	+0.6