Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS02270

Experiment: L-Malic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE51_RS02260 and ABIE51_RS02265 overlap by 4 nucleotidesABIE51_RS02265 and ABIE51_RS02270 overlap by 4 nucleotidesABIE51_RS02270 and ABIE51_RS02275 are separated by 210 nucleotides ABIE51_RS02260: ABIE51_RS02260 - glycosyltransferase family 39 protein, at 507,561 to 509,249 _RS02260 ABIE51_RS02265: ABIE51_RS02265 - glycosyltransferase family 2 protein, at 509,246 to 510,109 _RS02265 ABIE51_RS02270: ABIE51_RS02270 - glycosyltransferase family 2 protein, at 510,106 to 510,921 _RS02270 ABIE51_RS02275: ABIE51_RS02275 - glycosyltransferase, at 511,132 to 512,169 _RS02275 Position (kb) 510 511Strain fitness (log2 ratio) -2 -1 0 1 2at 509.409 kb on + strand, within ABIE51_RS02265at 509.835 kb on + strand, within ABIE51_RS02265at 509.835 kb on + strand, within ABIE51_RS02265at 509.835 kb on + strand, within ABIE51_RS02265at 509.836 kb on - strand, within ABIE51_RS02265at 509.836 kb on - strand, within ABIE51_RS02265at 510.064 kb on - strandat 510.064 kb on - strandat 510.064 kb on - strandat 510.064 kb on - strandat 510.064 kb on - strandat 511.327 kb on + strand, within ABIE51_RS02275at 511.327 kb on + strand, within ABIE51_RS02275at 511.327 kb on + strand, within ABIE51_RS02275at 511.327 kb on + strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.328 kb on - strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.486 kb on + strand, within ABIE51_RS02275at 511.487 kb on - strand, within ABIE51_RS02275at 511.487 kb on - strand, within ABIE51_RS02275at 511.487 kb on - strand, within ABIE51_RS02275at 511.487 kb on - strand, within ABIE51_RS02275at 511.487 kb on - strand, within ABIE51_RS02275at 511.488 kb on + strand, within ABIE51_RS02275at 511.488 kb on + strand, within ABIE51_RS02275at 511.488 kb on + strand, within ABIE51_RS02275at 511.775 kb on - strand, within ABIE51_RS02275at 511.783 kb on + strand, within ABIE51_RS02275at 511.783 kb on + strand, within ABIE51_RS02275at 511.783 kb on + strand, within ABIE51_RS02275at 511.783 kb on + strand, within ABIE51_RS02275at 511.783 kb on + strand, within ABIE51_RS02275at 511.783 kb on + strand, within ABIE51_RS02275at 511.784 kb on - strand, within ABIE51_RS02275at 511.784 kb on - strand, within ABIE51_RS02275at 511.784 kb on - strand, within ABIE51_RS02275

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C)
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509,409 + ABIE51_RS02265 0.19 +1.1
509,835 + ABIE51_RS02265 0.68 -1.7
509,835 + ABIE51_RS02265 0.68 -0.7
509,835 + ABIE51_RS02265 0.68 -0.7
509,836 - ABIE51_RS02265 0.68 -0.5
509,836 - ABIE51_RS02265 0.68 +0.7
510,064 - +1.7
510,064 - +0.7
510,064 - +1.7
510,064 - -0.1
510,064 - -0.7
511,327 + ABIE51_RS02275 0.19 +0.0
511,327 + ABIE51_RS02275 0.19 +0.2
511,327 + ABIE51_RS02275 0.19 +0.7
511,327 + ABIE51_RS02275 0.19 -0.5
511,328 - ABIE51_RS02275 0.19 +0.2
511,328 - ABIE51_RS02275 0.19 +0.4
511,328 - ABIE51_RS02275 0.19 +0.0
511,328 - ABIE51_RS02275 0.19 -0.3
511,328 - ABIE51_RS02275 0.19 -0.6
511,328 - ABIE51_RS02275 0.19 -1.4
511,328 - ABIE51_RS02275 0.19 -0.4
511,328 - ABIE51_RS02275 0.19 +1.6
511,328 - ABIE51_RS02275 0.19 -0.6
511,328 - ABIE51_RS02275 0.19 +2.0
511,328 - ABIE51_RS02275 0.19 -0.4
511,486 + ABIE51_RS02275 0.34 -0.1
511,486 + ABIE51_RS02275 0.34 -0.1
511,486 + ABIE51_RS02275 0.34 -0.7
511,486 + ABIE51_RS02275 0.34 -1.1
511,486 + ABIE51_RS02275 0.34 -1.9
511,486 + ABIE51_RS02275 0.34 -1.2
511,486 + ABIE51_RS02275 0.34 -0.3
511,486 + ABIE51_RS02275 0.34 +0.1
511,486 + ABIE51_RS02275 0.34 -0.4
511,486 + ABIE51_RS02275 0.34 +0.7
511,486 + ABIE51_RS02275 0.34 +1.3
511,487 - ABIE51_RS02275 0.34 -1.0
511,487 - ABIE51_RS02275 0.34 -0.4
511,487 - ABIE51_RS02275 0.34 -1.7
511,487 - ABIE51_RS02275 0.34 -0.7
511,487 - ABIE51_RS02275 0.34 -2.1
511,488 + ABIE51_RS02275 0.34 -2.6
511,488 + ABIE51_RS02275 0.34 -1.0
511,488 + ABIE51_RS02275 0.34 -0.1
511,775 - ABIE51_RS02275 0.62 -0.6
511,783 + ABIE51_RS02275 0.63 -0.5
511,783 + ABIE51_RS02275 0.63 +0.1
511,783 + ABIE51_RS02275 0.63 +0.1
511,783 + ABIE51_RS02275 0.63 +1.1
511,783 + ABIE51_RS02275 0.63 -0.2
511,783 + ABIE51_RS02275 0.63 -1.1
511,784 - ABIE51_RS02275 0.63 -0.3
511,784 - ABIE51_RS02275 0.63 -0.5
511,784 - ABIE51_RS02275 0.63 -0.7

Or see this region's nucleotide sequence