Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3367

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT3366 and BT3367 are separated by 79 nucleotidesBT3367 and BT3368 are separated by 103 nucleotides BT3366: BT3366 - putative glycosyltransferase yibD (NCBI ptt file), at 4,341,957 to 4,342,967 BT3366 BT3367: BT3367 - putative glycosyltransferase (NCBI ptt file), at 4,343,047 to 4,344,210 BT3367 BT3368: BT3368 - putative glycosyltransferase (NCBI ptt file), at 4,344,314 to 4,345,477 BT3368 Position (kb) 4343 4344 4345Strain fitness (log2 ratio) -2 -1 0 1at 4343.706 kb on - strand, within BT3367at 4344.208 kb on + strandat 4344.222 kb on + strandat 4344.235 kb on + strandat 4344.754 kb on + strand, within BT3368

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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4,343,706 - BT3367 0.57 +0.4
4,344,208 + -0.4
4,344,222 + +0.9
4,344,235 + +0.5
4,344,754 + BT3368 0.38 -2.5

Or see this region's nucleotide sequence