Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2455

Experiment: L-Fucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Fucose (C)
3,070,402	-		BT2452	0.38	-0.6
3,070,447	+		BT2452	0.49	-0.6
3,070,459	-		BT2452	0.52	+0.1
3,070,460	+		BT2452	0.52	+0.6
3,070,461	-		BT2452	0.53	-0.0
3,070,462	+		BT2452	0.53	+1.6
3,070,462	+		BT2452	0.53	-0.4
3,070,463	-		BT2452	0.53	+1.2
3,070,463	-		BT2452	0.53	-1.4
3,070,508	+		BT2452	0.64	+0.0
3,070,508	+		BT2452	0.64	+1.4
3,070,582	+		BT2452	0.83	+0.5
3,070,582	+		BT2452	0.83	-1.2
3,070,592	-		BT2452	0.86	+0.3
3,070,592	-		BT2452	0.86	-3.1
3,070,592	-		BT2452	0.86	+0.2
3,070,594	-		BT2452	0.86	-0.9
3,070,611	-				+0.4
3,070,612	+				-1.3
3,070,613	-				+0.5
3,070,613	-				-1.0
3,070,616	-				+1.2
3,070,621	+				-0.7
3,070,622	-				+0.0
3,070,622	-				+0.2
3,070,624	+				-0.4
3,070,624	+				+0.2
3,070,627	-				-1.0
3,070,630	-				-1.2
3,070,698	+		BT2453	0.20	-1.0
3,070,698	+		BT2453	0.20	+0.8
3,070,705	-		BT2453	0.23	-0.1
3,070,736	+		BT2453	0.38	-1.0
3,070,736	+		BT2453	0.38	+0.3
3,070,773	+		BT2453	0.56	+0.4
3,070,776	-		BT2453	0.57	+0.9
3,070,860	-				+1.5
3,070,883	+				+1.2
3,070,884	-				-0.5
3,070,914	+				-0.8
3,070,914	+				-0.2
3,070,914	+				-1.1
3,070,914	+				+0.3
3,070,915	-				+0.0
3,070,915	-				-1.8
3,070,915	-				+1.4
3,070,915	-				+0.1
3,070,915	-				+0.0
3,070,919	-				+1.6
3,070,919	-				-1.3
3,070,925	-				-0.4
3,070,993	+				+0.3
3,070,993	+				-1.0
3,070,993	+				-0.4
3,070,999	-				+0.3
3,071,009	+				+0.5
3,071,010	-				-0.6
3,071,016	+				+0.4
3,071,017	-				+0.0
3,071,024	+				-1.1
3,071,024	+				+0.9
3,071,025	-		BT2454	0.10	-2.7
3,071,072	+		BT2454	0.28	-0.4
3,071,073	-		BT2454	0.29	+0.1
3,071,125	-		BT2454	0.49	+0.4
3,071,138	-		BT2454	0.54	-0.1
3,071,141	+		BT2454	0.55	-2.0
3,071,141	+		BT2454	0.55	-0.6
3,071,156	+		BT2454	0.61	-0.3
3,071,193	+		BT2454	0.75	+0.8
3,071,194	-		BT2454	0.76	-0.4
3,071,194	-		BT2454	0.76	+0.0
3,071,228	-		BT2454	0.89	-1.6
3,071,229	+		BT2454	0.89	+1.0
3,071,230	-		BT2454	0.90	-1.4
3,071,230	-		BT2454	0.90	+1.3
3,071,244	-				+0.4
3,071,255	-				+1.0
3,071,319	+				+0.6
3,071,343	+				+1.8
3,071,364	+				+0.6
3,071,364	+				-0.4
3,071,364	+				+0.4
3,071,434	-		BT2455	0.11	-0.7
3,071,434	-		BT2455	0.11	-1.6
3,071,439	+		BT2455	0.12	-1.6
3,071,439	+		BT2455	0.12	-2.1
3,071,439	+		BT2455	0.12	-0.1
3,071,439	+		BT2455	0.12	-2.4
3,071,456	+		BT2455	0.14	+0.5
3,071,513	-		BT2455	0.23	-1.1
3,071,539	+		BT2455	0.27	+0.0
3,071,540	-		BT2455	0.27	+1.2
3,071,548	-		BT2455	0.28	+0.6
3,071,548	-		BT2455	0.28	+0.1
3,071,571	+		BT2455	0.31	-1.9
3,071,574	+		BT2455	0.32	+0.6
3,071,574	+		BT2455	0.32	-0.8
3,071,574	+		BT2455	0.32	+0.6
3,071,583	+		BT2455	0.33	+0.1
3,071,592	+		BT2455	0.34	-1.0
3,071,599	-		BT2455	0.35	-1.6
3,071,599	-		BT2455	0.35	+0.9
3,071,678	-		BT2455	0.47	-2.0
3,071,690	-		BT2455	0.48	-0.3
3,071,690	-		BT2455	0.48	+0.0
3,071,722	+		BT2455	0.53	-0.9
3,071,722	+		BT2455	0.53	-1.3
3,071,746	+		BT2455	0.57	-1.3
3,071,838	+		BT2455	0.70	+0.1
3,071,839	-		BT2455	0.70	-2.9
3,071,858	+		BT2455	0.73	+1.0
3,071,858	+		BT2455	0.73	+0.3
3,071,866	-		BT2455	0.74	-0.4
3,071,870	-		BT2455	0.74	-0.4
3,071,887	-		BT2455	0.77	-1.3
3,071,892	-		BT2455	0.78	-0.4
3,071,899	+		BT2455	0.79	+0.8
3,071,899	+		BT2455	0.79	-0.2
3,071,900	-		BT2455	0.79	+0.3
3,071,901	+		BT2455	0.79	-1.7
3,071,927	-		BT2455	0.83	-0.3
3,071,939	-		BT2455	0.84	-0.4
3,071,941	+		BT2455	0.85	+0.3
3,071,942	-		BT2455	0.85	+0.1
3,071,966	-		BT2455	0.88	-0.3
3,071,992	+				+0.6
3,072,005	+				+0.3
3,072,006	-				+1.1
3,072,024	+				-2.3
3,072,171	+		BT2456	0.25	+1.1
3,072,171	+		BT2456	0.25	+1.5
3,072,171	+		BT2456	0.25	-0.6
3,072,203	+		BT2456	0.32	-0.9
3,072,203	+		BT2456	0.32	-1.3
3,072,204	-		BT2456	0.32	-1.2
3,072,204	-		BT2456	0.32	-0.7
3,072,204	-		BT2456	0.32	+0.0
3,072,207	+		BT2456	0.33	+1.9
3,072,208	-		BT2456	0.33	-1.1
3,072,233	-		BT2456	0.38	-0.3
3,072,233	-		BT2456	0.38	-1.6
3,072,258	-		BT2456	0.43	-1.7
3,072,258	-		BT2456	0.43	+0.2
3,072,311	+		BT2456	0.54	+0.0
3,072,311	+		BT2456	0.54	-3.0
3,072,312	-		BT2456	0.54	-0.0
3,072,312	-		BT2456	0.54	-0.9
3,072,312	-		BT2456	0.54	-0.2
3,072,348	+		BT2456	0.61	+0.2
3,072,348	+				+1.0
3,072,348	+		BT2456	0.61	+1.6
3,072,348	+		BT2456	0.61	-0.2
3,072,349	-		BT2456	0.62	+1.4
3,072,393	+		BT2456	0.71	+0.4
3,072,394	-		BT2456	0.71	+0.0
3,072,394	-		BT2456	0.71	+0.1
3,072,394	-		BT2456	0.71	-1.2
3,072,446	+		BT2456	0.81	+0.5
3,072,446	+		BT2456	0.81	-1.2
3,072,448	+		BT2456	0.82	+0.1
3,072,448	+		BT2456	0.82	+0.3
3,072,449	-		BT2456	0.82	-0.0
3,072,526	-				+0.0
3,072,558	+				+1.3
3,072,568	+				+0.7
3,072,568	+				+0.3
3,072,569	-				-0.8
3,072,569	-				-0.1
3,072,573	-				+0.4
3,072,604	+				+0.0
3,072,604	+				+0.2
3,072,612	-				+0.0
3,072,662	+				-1.0
3,072,663	-				-2.3
3,072,706	+				-0.1
3,072,723	-				+1.6
3,072,725	-				-0.2
3,072,737	+				+1.1
3,072,755	+				+0.3
3,072,755	+				+1.6
3,072,756	-				+1.2
3,072,759	+				+2.3
3,072,760	-				-0.1
3,072,760	-				-0.3
3,072,760	-				-2.4
3,072,787	+				+1.2
3,072,799	+				+1.5
3,072,800	-				-1.5
3,072,800	-				-1.7
3,072,806	+				-0.4
3,072,809	+				+1.0
3,072,856	+				+1.2
3,072,871	+				+0.7
3,072,909	+				-3.0
3,072,928	+				-0.1
3,072,929	-				-0.1
3,072,929	-				-2.2
3,072,937	+				+0.2
3,072,943	-				+0.3
3,073,014	+				+1.0