Strain Fitness in Pantoea sp. MT58 around IAI47_07175

Experiment: Defined media control, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, anaerobic
1,514,455	+		IAI47_07170	0.39	+1.3
1,514,455	+		IAI47_07170	0.39	+0.3
1,514,455	+		IAI47_07170	0.39	-1.5
1,514,456	-		IAI47_07170	0.40	+1.5
1,514,456	-		IAI47_07170	0.40	-0.2
1,514,456	-		IAI47_07170	0.40	-0.3
1,514,456	-		IAI47_07170	0.40	-0.7
1,514,456	-		IAI47_07170	0.40	+0.6
1,514,456	-		IAI47_07170	0.40	+0.1
1,514,482	-		IAI47_07170	0.42	-1.2
1,514,542	-		IAI47_07170	0.47	-0.0
1,514,565	+		IAI47_07170	0.49	+0.9
1,514,565	+		IAI47_07170	0.49	-0.2
1,514,565	+		IAI47_07170	0.49	-1.0
1,514,565	+		IAI47_07170	0.49	-2.2
1,514,566	-		IAI47_07170	0.49	-0.8
1,514,587	+		IAI47_07170	0.51	+1.2
1,514,587	+		IAI47_07170	0.51	-0.8
1,514,587	+		IAI47_07170	0.51	-1.0
1,514,587	+		IAI47_07170	0.51	-0.2
1,514,588	-		IAI47_07170	0.51	+1.0
1,514,588	-		IAI47_07170	0.51	+0.1
1,514,588	-		IAI47_07170	0.51	-0.5
1,514,588	-		IAI47_07170	0.51	+1.1
1,514,588	-		IAI47_07170	0.51	-0.2
1,514,588	-		IAI47_07170	0.51	+0.4
1,514,596	+		IAI47_07170	0.52	+0.4
1,514,596	+		IAI47_07170	0.52	-0.0
1,514,596	+		IAI47_07170	0.52	+1.8
1,514,596	+		IAI47_07170	0.52	-1.4
1,514,596	+		IAI47_07170	0.52	-0.6
1,514,596	+		IAI47_07170	0.52	-0.7
1,514,596	+		IAI47_07170	0.52	+1.0
1,514,596	+		IAI47_07170	0.52	+1.3
1,514,597	-		IAI47_07170	0.52	+0.5
1,514,597	-		IAI47_07170	0.52	-0.5
1,514,597	-		IAI47_07170	0.52	-0.6
1,514,597	-		IAI47_07170	0.52	+0.4
1,514,628	+		IAI47_07170	0.54	-2.3
1,514,628	+		IAI47_07170	0.54	-0.5
1,514,643	+		IAI47_07170	0.56	-0.7
1,514,644	-		IAI47_07170	0.56	-0.0
1,514,664	+		IAI47_07170	0.57	+0.2
1,514,665	-		IAI47_07170	0.57	+0.4
1,514,665	-		IAI47_07170	0.57	+0.8
1,514,665	-		IAI47_07170	0.57	-2.3
1,514,686	-		IAI47_07170	0.59	+0.8
1,514,715	+		IAI47_07170	0.62	+1.9
1,514,716	-		IAI47_07170	0.62	+0.5
1,514,722	-		IAI47_07170	0.62	+0.4
1,514,722	-		IAI47_07170	0.62	+0.2
1,514,722	-		IAI47_07170	0.62	-0.7
1,514,722	-		IAI47_07170	0.62	+2.5
1,514,808	+		IAI47_07170	0.70	+0.1
1,514,808	+		IAI47_07170	0.70	+0.9
1,514,841	+		IAI47_07170	0.73	-1.8
1,514,842	-		IAI47_07170	0.73	+0.1
1,514,842	-		IAI47_07170	0.73	+1.3
1,514,842	-		IAI47_07170	0.73	-0.0
1,514,842	-		IAI47_07170	0.73	-0.1
1,514,842	-		IAI47_07170	0.73	+1.1
1,514,842	-		IAI47_07170	0.73	-0.4
1,514,842	-		IAI47_07170	0.73	-0.3
1,514,844	-		IAI47_07170	0.73	-1.6
1,514,866	-		IAI47_07170	0.75	-0.6
1,514,893	+		IAI47_07170	0.77	-0.8
1,514,894	-		IAI47_07170	0.77	-1.7
1,514,899	-		IAI47_07170	0.78	-0.9
1,514,899	-		IAI47_07170	0.78	+0.6
1,514,938	+		IAI47_07170	0.81	+0.8
1,514,938	+		IAI47_07170	0.81	+0.3
1,514,938	+		IAI47_07170	0.81	+0.2
1,514,938	+		IAI47_07170	0.81	+0.6
1,514,938	+		IAI47_07170	0.81	+0.7
1,514,938	+		IAI47_07170	0.81	-0.1
1,514,938	+		IAI47_07170	0.81	+1.0
1,514,938	+		IAI47_07170	0.81	+0.4
1,514,938	+		IAI47_07170	0.81	-1.2
1,514,938	+		IAI47_07170	0.81	-0.5
1,514,938	+		IAI47_07170	0.81	-0.4
1,514,938	+		IAI47_07170	0.81	+0.7
1,514,939	-		IAI47_07170	0.81	+1.0
1,514,939	-		IAI47_07170	0.81	-0.1
1,514,939	-		IAI47_07170	0.81	+0.4
1,514,939	-		IAI47_07170	0.81	-0.2
1,514,939	-		IAI47_07170	0.81	+0.3
1,514,939	-		IAI47_07170	0.81	-0.6
1,514,939	-		IAI47_07170	0.81	-0.8
1,514,939	-		IAI47_07170	0.81	-0.5
1,514,939	-		IAI47_07170	0.81	+0.1
1,514,939	-		IAI47_07170	0.81	-0.1
1,514,983	+		IAI47_07170	0.85	+0.0
1,514,983	+		IAI47_07170	0.85	-0.5
1,514,983	+		IAI47_07170	0.85	+0.3
1,514,983	+		IAI47_07170	0.85	-0.3
1,514,983	+		IAI47_07170	0.85	-1.3
1,514,984	-		IAI47_07170	0.85	+1.5
1,514,984	-		IAI47_07170	0.85	+0.9
1,515,007	+		IAI47_07170	0.87	-0.4
1,515,139	+				-2.3
1,515,139	+				+1.4
1,515,140	-				+0.1
1,515,140	-				-0.7
1,515,178	+				-0.5
1,515,179	-				+0.1
1,515,239	-				-1.1
1,515,239	-				+0.7
1,515,245	+				-0.6
1,515,284	+				-0.3
1,515,284	+				+0.9
1,515,284	+				-1.4
1,515,284	+				+0.5
1,515,284	+				+0.1
1,515,284	+				+0.5
1,515,284	+				+1.2
1,515,285	-				-0.1
1,515,285	-				-0.7
1,515,285	-				-0.1
1,515,285	-				-3.0
1,515,285	-				-0.1
1,515,303	+				+1.9
1,515,304	-				+0.3
1,515,304	-				-0.0
1,515,335	+				-0.7
1,515,372	+				-0.3
1,515,372	+				-0.7
1,515,372	+				-0.7
1,515,372	+				+0.2
1,515,372	+				-0.5
1,515,373	-				+0.2
1,515,373	-				-3.3
1,515,373	-				+0.9
1,515,378	-				-2.2
1,515,386	+				+0.0
1,515,386	+				+0.6
1,515,386	+				+0.3
1,515,386	+				-2.1
1,515,386	+				+0.1
1,515,386	+				+0.1
1,515,386	+				-2.5
1,515,386	+				-0.4
1,515,386	+				-0.8
1,515,386	+				-0.4
1,515,386	+				-2.2
1,515,386	+				-0.2
1,515,386	+				+0.1
1,515,387	-				-0.8
1,515,387	-				-1.3
1,515,387	-				-1.8
1,515,387	-				-1.5
1,515,387	-				-0.8
1,515,387	-				+1.4
1,515,387	-				-0.3
1,515,424	-				-1.6
1,515,431	+				+0.0
1,515,432	-				-1.2
1,515,464	-				+0.4
1,515,562	-		IAI47_07175	0.14	-0.8
1,515,739	+		IAI47_07175	0.31	-0.1
1,515,763	+		IAI47_07175	0.33	-0.6
1,515,763	+		IAI47_07175	0.33	-1.1
1,515,763	+		IAI47_07175	0.33	-1.3
1,515,763	+		IAI47_07175	0.33	+0.9
1,515,763	+		IAI47_07175	0.33	-1.7
1,515,763	+		IAI47_07175	0.33	-1.3
1,515,763	+		IAI47_07175	0.33	+0.1
1,515,763	+		IAI47_07175	0.33	-0.9
1,515,764	-		IAI47_07175	0.33	-1.7
1,515,764	-		IAI47_07175	0.33	+0.2
1,515,764	-		IAI47_07175	0.33	-1.3
1,515,764	-		IAI47_07175	0.33	+0.1
1,515,786	+		IAI47_07175	0.35	-0.8
1,515,886	-		IAI47_07175	0.45	+0.2
1,515,910	+		IAI47_07175	0.47	-0.9
1,515,910	+		IAI47_07175	0.47	-1.4
1,515,910	+		IAI47_07175	0.47	-0.9
1,515,910	+		IAI47_07175	0.47	-1.0
1,515,910	+		IAI47_07175	0.47	-1.6
1,515,910	+		IAI47_07175	0.47	-0.5
1,515,910	+		IAI47_07175	0.47	-0.6
1,515,910	+		IAI47_07175	0.47	-0.5
1,515,910	+		IAI47_07175	0.47	-1.7
1,515,910	+		IAI47_07175	0.47	+0.1
1,515,911	-		IAI47_07175	0.47	-0.3
1,515,911	-		IAI47_07175	0.47	-0.5
1,515,911	-		IAI47_07175	0.47	-0.7
1,515,911	-		IAI47_07175	0.47	-1.5
1,515,911	-		IAI47_07175	0.47	+0.4
1,515,911	-		IAI47_07175	0.47	-2.5
1,515,912	+		IAI47_07175	0.47	-1.5
1,515,912	+		IAI47_07175	0.47	-1.6
1,515,912	+		IAI47_07175	0.47	-0.8
1,515,913	-		IAI47_07175	0.47	-1.1
1,515,964	+		IAI47_07175	0.52	+0.6
1,515,965	-		IAI47_07175	0.52	+1.3
1,515,965	-		IAI47_07175	0.52	-0.8
1,516,041	+		IAI47_07175	0.59	+0.2
1,516,044	+		IAI47_07175	0.60	-0.4
1,516,044	+		IAI47_07175	0.60	-0.2
1,516,045	-		IAI47_07175	0.60	-0.8
1,516,045	-		IAI47_07175	0.60	-0.7
1,516,045	-		IAI47_07175	0.60	+0.1
1,516,045	-		IAI47_07175	0.60	-1.8
1,516,123	-		IAI47_07175	0.67	-0.0
1,516,128	+		IAI47_07175	0.68	-0.2
1,516,128	+		IAI47_07175	0.68	-1.5
1,516,128	+		IAI47_07175	0.68	-1.7
1,516,128	+		IAI47_07175	0.68	-1.6
1,516,128	+		IAI47_07175	0.68	+0.0
1,516,128	+		IAI47_07175	0.68	+1.4
1,516,129	-		IAI47_07175	0.68	-0.9
1,516,129	-		IAI47_07175	0.68	-0.8
1,516,131	+		IAI47_07175	0.68	-0.9
1,516,132	-		IAI47_07175	0.68	+0.8
1,516,132	-		IAI47_07175	0.68	-1.4
1,516,132	-		IAI47_07175	0.68	-0.8
1,516,132	-		IAI47_07175	0.68	-0.7
1,516,132	-		IAI47_07175	0.68	-0.2
1,516,138	-		IAI47_07175	0.69	-1.5
1,516,158	+		IAI47_07175	0.70	-0.3
1,516,158	+		IAI47_07175	0.70	-0.5
1,516,159	-		IAI47_07175	0.71	-1.5
1,516,159	-		IAI47_07175	0.71	+0.1
1,516,194	+		IAI47_07175	0.74	-0.2
1,516,194	+		IAI47_07175	0.74	+0.2
1,516,194	+		IAI47_07175	0.74	-0.4
1,516,194	+		IAI47_07175	0.74	-1.1
1,516,195	-		IAI47_07175	0.74	-0.0
1,516,195	-		IAI47_07175	0.74	+0.3
1,516,195	-		IAI47_07175	0.74	-0.8
1,516,195	-		IAI47_07175	0.74	-2.9
1,516,200	+		IAI47_07175	0.74	-0.9
1,516,200	+		IAI47_07175	0.74	+0.1
1,516,201	-		IAI47_07175	0.75	-2.0
1,516,263	-		IAI47_07175	0.80	-0.7
1,516,263	-		IAI47_07175	0.80	-0.5
1,516,387	+				+2.4
1,516,387	+				-1.7
1,516,387	+				-1.2
1,516,387	+				+0.8
1,516,387	+				-0.2
1,516,388	-				-2.5
1,516,393	+				-0.1
1,516,468	+				+0.2
1,516,468	+				-0.6
1,516,469	-				+0.8
1,516,489	+				-0.1
1,516,489	+				+0.7
1,516,489	+				+0.7
1,516,489	+				-0.6
1,516,490	-				+0.1
1,516,515	+				-0.4
1,516,515	+				+0.8
1,516,520	+				+0.2
1,516,520	+				+0.8
1,516,520	+				-0.5
1,516,520	+				-0.3
1,516,521	-				-0.9
1,516,521	-				+0.4
1,516,521	-				+0.4
1,516,521	-				+0.3
1,516,538	+				-0.1
1,516,538	+				+0.4
1,516,539	-				-2.0
1,516,555	+				-1.4
1,516,555	+				-1.8
1,516,574	+				-0.1
1,516,575	-				-0.9
1,516,662	+				-2.3
1,516,663	-				-2.4
1,516,663	-				-1.2
1,516,678	+		IAI47_07180	0.14	-0.9
1,516,678	+		IAI47_07180	0.14	-0.1
1,516,678	+		IAI47_07180	0.14	-0.4
1,516,678	+		IAI47_07180	0.14	-1.6
1,516,678	+		IAI47_07180	0.14	-1.8
1,516,678	+		IAI47_07180	0.14	-1.4
1,516,678	+		IAI47_07180	0.14	-0.6
1,516,678	+		IAI47_07180	0.14	-0.5
1,516,678	+		IAI47_07180	0.14	-0.1
1,516,679	-		IAI47_07180	0.15	+0.1
1,516,781	+		IAI47_07180	0.46	-0.0
1,516,782	-		IAI47_07180	0.46	-1.4
1,516,782	-		IAI47_07180	0.46	-2.2
1,516,782	-		IAI47_07180	0.46	+0.0
1,516,783	+		IAI47_07180	0.46	+0.0
1,516,783	+		IAI47_07180	0.46	-0.3
1,516,783	+		IAI47_07180	0.46	-2.4
1,516,783	+		IAI47_07180	0.46	+1.4
1,516,784	-		IAI47_07180	0.47	-0.5
1,516,811	-		IAI47_07180	0.55	-0.6
1,516,844	+		IAI47_07180	0.65	-1.5
1,516,865	+		IAI47_07180	0.72	-0.3
1,516,865	+		IAI47_07180	0.72	-0.7
1,516,865	+		IAI47_07180	0.72	-0.4
1,516,865	+		IAI47_07180	0.72	-1.6
1,516,865	+		IAI47_07180	0.72	-0.3
1,516,865	+		IAI47_07180	0.72	-0.9
1,516,865	+		IAI47_07180	0.72	-1.0
1,516,865	+		IAI47_07180	0.72	-0.2
1,516,865	+		IAI47_07180	0.72	+0.8
1,516,865	+		IAI47_07180	0.72	+0.1
1,516,865	+		IAI47_07180	0.72	-0.3
1,516,865	+		IAI47_07180	0.72	+0.1
1,516,866	-		IAI47_07180	0.72	-1.6
1,516,866	-		IAI47_07180	0.72	-0.7
1,516,866	-		IAI47_07180	0.72	-1.4
1,516,866	-		IAI47_07180	0.72	-0.3
1,516,866	-		IAI47_07180	0.72	-0.6
1,516,866	-		IAI47_07180	0.72	-1.5
1,516,866	-		IAI47_07180	0.72	+0.1
1,516,913	-		IAI47_07180	0.86	-0.8
1,516,955	+				+0.3
1,516,955	+				-2.1
1,516,956	-				+0.2
1,516,963	+				+0.8
1,516,963	+				+0.1
1,516,964	-				+0.1
1,516,964	-				-0.3
1,516,964	-				-0.3
1,516,964	-				+0.9
1,516,965	+				+0.0
1,516,965	+				+0.4
1,516,965	+				-0.9
1,516,965	+				-0.1
1,516,965	+				-0.9
1,516,965	+				-0.7
1,516,965	+				-1.8
1,516,965	+				-0.2
1,516,965	+				-0.6
1,516,965	+				-0.9
1,516,965	+				-0.2
1,516,965	+				-0.5
1,516,965	+				+0.6
1,516,965	+				+0.6
1,516,965	-				-0.4
1,516,965	-				+0.2
1,516,966	-				-1.2
1,516,966	-				+0.7
1,516,966	-				+0.1
1,516,966	-				+0.2
1,516,966	-				+0.8
1,516,966	-				-2.6
1,516,966	-				+0.3
1,516,966	-				+0.3
1,516,966	-				-0.4
1,516,966	-				-1.5
1,516,966	-				-2.5
1,516,966	-				+0.3
1,516,966	-				+0.6
1,516,976	+				+0.6
1,516,977	-				+1.3
1,516,977	-				+1.3
1,516,977	-				-0.0
1,516,986	+				+0.2
1,516,986	+				-0.7
1,516,986	+				+0.2
1,516,987	-				+1.1
1,516,987	-				-0.2
1,517,032	-				-0.3
1,517,054	+				+0.3
1,517,054	+				+0.5
1,517,055	-				-1.4
1,517,086	+				+0.5
1,517,087	-				-1.9
1,517,107	+				-0.5
1,517,107	+				-0.1
1,517,121	+				+1.9
1,517,121	+				+0.5
1,517,122	-				+0.2
1,517,122	-				+0.6
1,517,243	-		IAI47_07185	0.18	+0.5
1,517,276	+		IAI47_07185	0.21	+2.3
1,517,277	-		IAI47_07185	0.21	-0.8
1,517,277	-		IAI47_07185	0.21	-1.0
1,517,296	-		IAI47_07185	0.23	-1.7
1,517,318	-		IAI47_07185	0.25	+0.2
1,517,342	+		IAI47_07185	0.27	-0.5
1,517,343	-		IAI47_07185	0.27	-0.6
1,517,343	-		IAI47_07185	0.27	+0.9
1,517,343	-		IAI47_07185	0.27	+0.4