Strain Fitness in Rahnella sp. WP5 around EX31_RS03135

Experiment: L-Serine (N); ShewMM media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N); ShewMM media; no shaking
110,054	+				+2.4
110,077	-				+1.4
110,077	-				-1.0
110,124	+		EX31_RS03130	0.11	+0.7
110,125	-		EX31_RS03130	0.11	-2.3
110,125	-		EX31_RS03130	0.11	+1.6
110,125	-		EX31_RS03130	0.11	+1.2
110,192	+		EX31_RS03130	0.18	+0.0
110,192	+		EX31_RS03130	0.18	+1.0
110,192	+		EX31_RS03130	0.18	-0.8
110,192	+		EX31_RS03130	0.18	+0.2
110,193	-		EX31_RS03130	0.18	+0.9
110,193	-		EX31_RS03130	0.18	-2.0
110,193	-		EX31_RS03130	0.18	+0.5
110,193	-		EX31_RS03130	0.18	+0.9
110,199	+		EX31_RS03130	0.18	+0.2
110,200	-		EX31_RS03130	0.19	+1.7
110,200	-		EX31_RS03130	0.19	+0.2
110,214	+		EX31_RS03130	0.20	-1.0
110,232	+		EX31_RS03130	0.22	-1.1
110,233	-		EX31_RS03130	0.22	-0.2
110,233	-		EX31_RS03130	0.22	-0.7
110,290	+		EX31_RS03130	0.28	+0.0
110,291	-		EX31_RS03130	0.28	-0.1
110,311	+		EX31_RS03130	0.30	+0.8
110,311	+		EX31_RS03130	0.30	+0.2
110,311	+		EX31_RS03130	0.30	+0.7
110,315	+		EX31_RS03130	0.30	+0.3
110,357	-		EX31_RS03130	0.35	+0.7
110,357	-		EX31_RS03130	0.35	-1.0
110,358	+		EX31_RS03130	0.35	+0.4
110,358	+		EX31_RS03130	0.35	+2.5
110,358	+		EX31_RS03130	0.35	-0.6
110,359	-		EX31_RS03130	0.35	+1.0
110,371	-		EX31_RS03130	0.36	-0.8
110,438	+		EX31_RS03130	0.43	-1.1
110,438	+		EX31_RS03130	0.43	+1.1
110,438	+		EX31_RS03130	0.43	+1.2
110,439	-		EX31_RS03130	0.43	+0.8
110,439	-		EX31_RS03130	0.43	+0.2
110,446	+		EX31_RS03130	0.44	+0.5
110,446	+		EX31_RS03130	0.44	+0.6
110,446	+		EX31_RS03130	0.44	+1.9
110,447	-		EX31_RS03130	0.44	+0.8
110,488	+		EX31_RS03130	0.48	-2.4
110,488	+		EX31_RS03130	0.48	-0.4
110,488	+		EX31_RS03130	0.48	+1.3
110,488	+		EX31_RS03130	0.48	-0.8
110,488	+		EX31_RS03130	0.48	-1.7
110,489	-		EX31_RS03130	0.48	-1.1
110,489	-		EX31_RS03130	0.48	+0.3
110,489	-		EX31_RS03130	0.48	+0.7
110,489	-		EX31_RS03130	0.48	-1.1
110,489	-		EX31_RS03130	0.48	-1.1
110,489	-		EX31_RS03130	0.48	-0.1
110,490	+		EX31_RS03130	0.49	-0.7
110,490	+		EX31_RS03130	0.49	-0.6
110,490	+		EX31_RS03130	0.49	-1.3
110,491	-		EX31_RS03130	0.49	-1.1
110,491	-		EX31_RS03130	0.49	+0.4
110,549	+		EX31_RS03130	0.55	-1.0
110,549	+		EX31_RS03130	0.55	-0.4
110,549	+		EX31_RS03130	0.55	+1.0
110,549	+		EX31_RS03130	0.55	-0.6
110,550	-		EX31_RS03130	0.55	+0.3
110,550	-		EX31_RS03130	0.55	-0.5
110,550	-		EX31_RS03130	0.55	-0.1
110,550	-		EX31_RS03130	0.55	+0.5
110,550	-		EX31_RS03130	0.55	+1.2
110,550	-		EX31_RS03130	0.55	-0.4
110,550	-		EX31_RS03130	0.55	+0.2
110,620	+		EX31_RS03130	0.62	-0.5
110,620	+		EX31_RS03130	0.62	-1.0
110,620	+		EX31_RS03130	0.62	+0.4
110,620	+		EX31_RS03130	0.62	+0.2
110,620	+		EX31_RS03130	0.62	+1.3
110,623	-		EX31_RS03130	0.62	+0.2
110,623	-		EX31_RS03130	0.62	-0.4
110,694	+		EX31_RS03130	0.70	+1.0
110,694	+		EX31_RS03130	0.70	-0.6
110,694	+		EX31_RS03130	0.70	-2.3
110,694	+		EX31_RS03130	0.70	-1.5
110,695	-		EX31_RS03130	0.70	+1.3
110,695	-		EX31_RS03130	0.70	+1.8
110,698	-		EX31_RS03130	0.70	+0.5
110,698	-		EX31_RS03130	0.70	+0.6
110,698	-		EX31_RS03130	0.70	+0.3
110,706	-		EX31_RS03130	0.71	-0.4
110,729	-		EX31_RS03130	0.73	+0.3
110,729	-		EX31_RS03130	0.73	-0.6
110,829	+		EX31_RS03130	0.83	+1.3
110,830	-		EX31_RS03130	0.84	+2.0
110,905	+				+1.8
110,905	+				-0.1
110,905	+				+0.9
110,906	-				+1.0
110,906	-				+0.9
110,906	-				+0.7
110,907	+				+0.1
110,907	+				-0.1
110,907	+				-0.0
110,908	-				+0.1
110,908	-				-0.4
110,919	-				-0.3
110,919	-				+0.7
110,949	+				-1.1
110,949	+				+0.2
110,950	-				-1.7
110,950	-				+0.7
110,953	+				-0.4
110,953	+				+1.1
110,953	+				+1.0
110,953	+				+0.1
110,953	+				+0.3
110,954	-				+1.0
110,954	-				+1.5
110,954	-				-1.0
110,954	-				+1.7
110,954	-				+0.7
110,954	-				+1.9
110,954	-				+0.8
110,954	-				+0.6
110,954	-				-1.8
110,983	+				-0.9
110,983	+				-0.5
110,983	+				+0.7
110,983	+				+1.0
110,984	-				+0.5
110,984	-				+0.3
110,984	-				+0.2
110,984	-				-1.1
110,984	-				+2.2
110,984	-				+0.3
110,984	-				+0.6
110,984	-				+2.1
110,984	-				+1.1
111,046	+				-0.8
111,047	-				-0.1
111,047	-				-0.7
111,106	+		EX31_RS03135	0.13	-2.1
111,106	+		EX31_RS03135	0.13	-0.4
111,106	+		EX31_RS03135	0.13	-1.3
111,106	+		EX31_RS03135	0.13	-0.1
111,106	+		EX31_RS03135	0.13	+1.0
111,106	+		EX31_RS03135	0.13	-0.4
111,106	+		EX31_RS03135	0.13	-1.3
111,106	+		EX31_RS03135	0.13	-0.2
111,106	+		EX31_RS03135	0.13	+0.3
111,106	+		EX31_RS03135	0.13	-2.0
111,106	+		EX31_RS03135	0.13	-1.7
111,106	+		EX31_RS03135	0.13	+0.5
111,106	+		EX31_RS03135	0.13	-0.3
111,106	+		EX31_RS03135	0.13	-0.6
111,106	+		EX31_RS03135	0.13	+1.6
111,107	-		EX31_RS03135	0.13	-1.7
111,107	-		EX31_RS03135	0.13	+0.7
111,107	-		EX31_RS03135	0.13	-0.2
111,107	-		EX31_RS03135	0.13	-0.6
111,107	-		EX31_RS03135	0.13	-0.9
111,107	-		EX31_RS03135	0.13	+0.6
111,107	-		EX31_RS03135	0.13	-0.1
111,107	-		EX31_RS03135	0.13	-0.3
111,107	-		EX31_RS03135	0.13	-0.5
111,107	-		EX31_RS03135	0.13	+0.1
111,107	-		EX31_RS03135	0.13	+0.5
111,107	-		EX31_RS03135	0.13	-1.0
111,107	-		EX31_RS03135	0.13	+0.5
111,107	-		EX31_RS03135	0.13	+0.2
111,107	-		EX31_RS03135	0.13	+0.5
111,107	-		EX31_RS03135	0.13	-0.9
111,107	-		EX31_RS03135	0.13	-1.0
111,107	-		EX31_RS03135	0.13	+0.4
111,107	-		EX31_RS03135	0.13	+0.7
111,107	-		EX31_RS03135	0.13	-0.4
111,107	-		EX31_RS03135	0.13	+1.1
111,188	+		EX31_RS03135	0.30	-0.3
111,300	-		EX31_RS03135	0.53	+1.0
111,314	+		EX31_RS03135	0.56	+2.4
111,314	+		EX31_RS03135	0.56	-1.1
111,315	-		EX31_RS03135	0.56	+1.4
111,322	+		EX31_RS03135	0.58	+1.3
111,322	+		EX31_RS03135	0.58	+1.4
111,322	+		EX31_RS03135	0.58	+0.3
111,322	+		EX31_RS03135	0.58	+2.2
111,322	+		EX31_RS03135	0.58	+0.2
111,322	+		EX31_RS03135	0.58	+0.1
111,322	+		EX31_RS03135	0.58	+0.2
111,322	+		EX31_RS03135	0.58	-1.0
111,323	-		EX31_RS03135	0.58	+0.3
111,323	-		EX31_RS03135	0.58	+0.5
111,323	-		EX31_RS03135	0.58	+0.4
111,323	-		EX31_RS03135	0.58	+0.4
111,323	-		EX31_RS03135	0.58	+0.7
111,323	-		EX31_RS03135	0.58	+0.1
111,323	-		EX31_RS03135	0.58	-0.4
111,411	-		EX31_RS03135	0.76	-1.3
111,435	-		EX31_RS03135	0.81	+0.9
111,435	-		EX31_RS03135	0.81	-1.4
111,449	-		EX31_RS03135	0.84	+1.1
111,476	+		EX31_RS03135	0.90	-0.2
111,513	+				-0.1
111,514	-				+0.1
111,537	-				+1.2
111,540	+				-0.8
111,541	-				-1.5
111,544	+				-0.1
111,544	+				-1.1
111,544	+				-0.3
111,544	+				-0.1
111,544	+				+2.2
111,544	+				+0.8
111,545	-				-0.5
111,545	-				+1.2
111,548	+				-0.7
111,548	+				+1.4
111,548	+				-0.6
111,582	-				-0.9
111,582	-				+0.6
111,613	-				+0.7
111,634	+				+0.1
111,635	-				-0.2
111,635	-				+1.2
111,653	+				-1.4
111,653	+				-0.1
111,653	+				-0.6
111,653	+				-0.5
111,653	+				+0.4
111,653	+				-1.6
111,653	+				+0.6
111,653	+				+0.4
111,654	-				-0.4
111,654	-				+0.2
111,654	-				-2.0
111,654	-				+0.7
111,654	-				+0.6
111,654	-				+1.0
111,654	-				-0.6
111,708	+		EX31_RS03140	0.11	+0.4
111,708	+		EX31_RS03140	0.11	+0.7
111,709	-		EX31_RS03140	0.12	-1.3
111,786	-		EX31_RS03140	0.23	+1.3
112,212	+		EX31_RS03140	0.89	+1.5
112,213	-		EX31_RS03140	0.89	-1.1
112,287	-				-0.4
112,287	-				-1.0
112,313	+				+0.8
112,314	-				+0.5
112,314	-				-0.8
112,314	-				+1.1
112,314	-				-0.5
112,317	+				+0.2
112,317	+				+0.7
112,318	-				+0.4
112,318	-				+1.2
112,319	+				+0.2
112,319	+				-1.4
112,319	+				-0.1
112,319	+				+0.3
112,320	-				-1.4
112,320	-				+0.0
112,320	-				-0.0
112,369	+				-0.1
112,369	+				-0.1
112,370	-				-1.2
112,370	-				+1.5
112,379	+				-0.6
112,379	+				+0.1
112,379	+				-0.4
112,379	+				+0.2
112,380	-				+0.4
112,380	-				-0.3
112,380	-				+0.2
112,380	-				+0.7
112,380	-				+0.6
112,409	+				-1.3
112,409	+				+1.5
112,409	+				+0.4
112,409	+				+0.1
112,409	+				-1.2
112,409	+				-2.4
112,410	-				+0.7
112,459	+				-1.6
112,459	+				+1.1
112,459	+				+0.6
112,459	+				-1.9
112,459	+				+0.8
112,459	+				-1.1
112,459	+				-3.0
112,459	+				+0.2
112,459	+				+0.7
112,459	+				-0.7
112,459	+				-0.5
112,460	-				-0.5
112,460	-				+0.2
112,460	-				+1.2
112,460	-				-0.3
112,460	-				+0.6
112,504	+				+1.1
112,505	-				-0.1
112,514	+		EX31_RS03145	0.11	-0.6