Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03138

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
3,285,021	-		CCNA_03137	0.43	-1.7
3,285,049	+		CCNA_03137	0.45	-0.3
3,285,057	-		CCNA_03137	0.46	-1.1
3,285,106	-		CCNA_03137	0.51	+0.2
3,285,147	+		CCNA_03137	0.55	+1.3
3,285,147	+		CCNA_03137	0.55	+1.2
3,285,155	-		CCNA_03137	0.55	+1.0
3,285,220	-		CCNA_03137	0.62	-1.3
3,285,225	+		CCNA_03137	0.62	+0.7
3,285,268	+		CCNA_03137	0.66	+0.2
3,285,273	+		CCNA_03137	0.67	+1.1
3,285,274	+		CCNA_03137	0.67	+0.4
3,285,295	+		CCNA_03137	0.69	+1.7
3,285,328	+		CCNA_03137	0.72	+0.4
3,285,328	+		CCNA_03137	0.72	+0.5
3,285,328	+		CCNA_03137	0.72	+1.0
3,285,328	+		CCNA_03137	0.72	+0.6
3,285,328	+		CCNA_03137	0.72	+0.2
3,285,328	+		CCNA_03137	0.72	+0.0
3,285,336	-		CCNA_03137	0.73	-1.3
3,285,336	-		CCNA_03137	0.73	+1.2
3,285,336	-		CCNA_03137	0.73	+1.5
3,285,336	-		CCNA_03137	0.73	+0.1
3,285,357	-		CCNA_03137	0.75	+1.1
3,285,446	+		CCNA_03137	0.83	-0.6
3,285,446	+		CCNA_03137	0.83	+0.2
3,285,446	+		CCNA_03137	0.83	+0.2
3,285,446	+		CCNA_03137	0.83	-0.9
3,285,449	-				-0.9
3,285,449	-				-0.4
3,285,449	-				+0.9
3,285,451	+				+0.3
3,285,451	+				-1.1
3,285,454	-				-0.6
3,285,454	-				-1.0
3,285,459	-				-0.8
3,285,459	-				-0.5
3,285,459	-				+0.9
3,285,464	-				+0.1
3,285,475	+				+1.1
3,285,481	-				-0.2
3,285,490	+				+0.4
3,285,496	-				-1.0
3,285,511	+				-1.4
3,285,511	+				-0.3
3,285,544	+				-0.3
3,285,554	+				-0.1
3,285,557	-				-0.2
3,285,581	+				-0.2
3,285,581	+				-0.1
3,285,589	-				-0.6
3,285,593	+				+0.2
3,285,621	+				+0.6
3,285,640	+		CCNA_03986	0.49	-1.3
3,285,647	-		CCNA_03986	0.51	+1.0
3,285,648	-		CCNA_03986	0.51	-1.0
3,285,658	-		CCNA_03986	0.54	-0.5
3,285,658	-		CCNA_03986	0.54	+2.0
3,285,691	+		CCNA_03986	0.63	+0.4
3,285,697	+		CCNA_03986	0.64	+1.8
3,285,697	+		CCNA_03986	0.64	+0.3
3,285,705	-		CCNA_03986	0.66	-1.5
3,285,722	+		CCNA_03986	0.71	-0.4
3,285,725	-		CCNA_03986	0.71	-1.2
3,285,725	-		CCNA_03986	0.71	-1.7
3,285,759	+		CCNA_03986	0.80	+0.3
3,285,773	+		CCNA_03986	0.84	-0.3
3,285,781	-		CCNA_03986	0.86	-1.3
3,285,786	+		CCNA_03986	0.87	+0.4
3,285,845	+				-1.6
3,285,845	+				-1.7
3,285,853	-				+0.8
3,285,857	+				-1.6
3,285,865	-				-2.2
3,285,871	-				-1.0
3,285,878	+				-1.2
3,285,878	+				-1.7
3,285,886	-				-0.1
3,285,901	-				-1.1
3,285,942	-				-2.1
3,286,024	-				+0.2
3,286,037	-				-1.4
3,286,038	+				+0.6
3,286,087	-				-0.9
3,286,137	+				-0.3
3,286,137	-				+0.5
3,286,204	-				-1.8
3,286,224	-		CCNA_03138	0.10	-1.2
3,286,241	+		CCNA_03138	0.11	-1.1
3,286,278	+		CCNA_03138	0.12	+0.3
3,286,286	-		CCNA_03138	0.13	-0.8
3,286,300	+		CCNA_03138	0.13	+0.2
3,286,313	+		CCNA_03138	0.14	+1.5
3,286,325	+		CCNA_03138	0.15	+1.1
3,286,343	+		CCNA_03138	0.15	+0.2
3,286,373	+		CCNA_03138	0.17	-1.0
3,286,388	+		CCNA_03138	0.17	+0.8
3,286,399	-		CCNA_03138	0.18	-0.2
3,286,449	-		CCNA_03138	0.20	-2.3
3,286,474	+		CCNA_03138	0.21	-0.5
3,286,474	+		CCNA_03138	0.21	-0.0
3,286,474	+		CCNA_03138	0.21	+1.2
3,286,477	-		CCNA_03138	0.21	+0.7
3,286,479	+		CCNA_03138	0.22	+0.1
3,286,482	-		CCNA_03138	0.22	-1.6
3,286,488	+		CCNA_03138	0.22	+1.4
3,286,494	-		CCNA_03138	0.22	-0.2
3,286,496	-		CCNA_03138	0.22	-0.4
3,286,512	+		CCNA_03138	0.23	-0.5
3,286,519	+		CCNA_03138	0.23	+0.1
3,286,526	+		CCNA_03138	0.24	+0.6
3,286,528	+		CCNA_03138	0.24	-0.4
3,286,541	+		CCNA_03138	0.24	-1.6
3,286,572	+		CCNA_03138	0.26	-0.2
3,286,585	+		CCNA_03138	0.26	-1.4
3,286,593	-		CCNA_03138	0.27	-0.1
3,286,593	-		CCNA_03138	0.27	-1.0
3,286,621	+		CCNA_03138	0.28	+2.0
3,286,629	-		CCNA_03138	0.28	-0.3
3,286,640	+		CCNA_03138	0.29	-2.0
3,286,660	-		CCNA_03138	0.30	-0.2
3,286,664	+		CCNA_03138	0.30	-1.0
3,286,664	+		CCNA_03138	0.30	+0.1
3,286,672	-		CCNA_03138	0.30	-3.1
3,286,672	-		CCNA_03138	0.30	+0.7
3,286,672	-		CCNA_03138	0.30	-1.0
3,286,672	-		CCNA_03138	0.30	+0.6
3,286,672	-		CCNA_03138	0.30	-0.2
3,286,673	+		CCNA_03138	0.30	-0.5
3,286,673	+		CCNA_03138	0.30	-1.2
3,286,676	-		CCNA_03138	0.30	+0.2
3,286,678	+		CCNA_03138	0.31	-1.6
3,286,681	-		CCNA_03138	0.31	-2.6
3,286,681	-		CCNA_03138	0.31	+0.2
3,286,697	-		CCNA_03138	0.31	-1.9
3,286,820	+		CCNA_03138	0.37	-2.1
3,286,820	+		CCNA_03138	0.37	-1.8
3,286,880	+		CCNA_03138	0.40	-0.5
3,286,901	+		CCNA_03138	0.41	-0.6
3,286,916	+		CCNA_03138	0.41	-2.3
3,286,944	+		CCNA_03138	0.43	-1.5
3,286,952	-		CCNA_03138	0.43	-1.5
3,286,962	-		CCNA_03138	0.43	+0.5
3,286,962	-		CCNA_03138	0.43	+1.5
3,287,013	-		CCNA_03138	0.46	-1.0
3,287,016	+		CCNA_03138	0.46	+1.2
3,287,016	+		CCNA_03138	0.46	-1.5
3,287,024	-		CCNA_03138	0.46	-1.8
3,287,027	+		CCNA_03138	0.46	-1.1
3,287,059	+		CCNA_03138	0.48	-1.4
3,287,091	+		CCNA_03138	0.49	-0.1
3,287,113	+		CCNA_03138	0.50	+2.2
3,287,149	-		CCNA_03138	0.52	-3.3
3,287,229	+		CCNA_03138	0.55	-0.4
3,287,235	+		CCNA_03138	0.56	-2.2
3,287,243	-		CCNA_03138	0.56	-0.5
3,287,250	+		CCNA_03138	0.56	+0.9
3,287,262	-		CCNA_03138	0.57	-2.5
3,287,263	-		CCNA_03138	0.57	-2.4
3,287,271	+		CCNA_03138	0.57	-1.2
3,287,279	-		CCNA_03138	0.58	-1.7
3,287,305	-		CCNA_03138	0.59	-1.1
3,287,307	+		CCNA_03138	0.59	-0.6
3,287,310	-		CCNA_03138	0.59	-1.0
3,287,372	+		CCNA_03138	0.62	+0.4
3,287,380	-		CCNA_03138	0.62	-0.1
3,287,386	-		CCNA_03138	0.62	-2.1
3,287,410	+		CCNA_03138	0.64	-0.1
3,287,431	+		CCNA_03138	0.65	-1.0
3,287,503	+		CCNA_03138	0.68	-0.8
3,287,511	-		CCNA_03138	0.68	+0.5
3,287,511	-		CCNA_03138	0.68	+0.5
3,287,527	+		CCNA_03138	0.69	-0.6
3,287,528	+		CCNA_03138	0.69	-0.5
3,287,547	-		CCNA_03138	0.70	-0.8
3,287,548	-		CCNA_03138	0.70	+0.5
3,287,637	-		CCNA_03138	0.74	-1.8
3,287,666	+		CCNA_03138	0.75	+1.5
3,287,725	-		CCNA_03138	0.78	-0.3
3,287,747	+		CCNA_03138	0.79	+0.4
3,287,755	-		CCNA_03138	0.79	-1.1
3,287,797	+		CCNA_03138	0.81	+0.5
3,287,800	-		CCNA_03138	0.81	+0.5
3,287,813	+		CCNA_03138	0.82	+0.2
3,287,822	+		CCNA_03138	0.82	-0.6
3,287,826	-		CCNA_03138	0.82	-0.5
3,287,830	-		CCNA_03138	0.82	+0.3
3,287,837	+		CCNA_03138	0.83	-1.2
3,287,870	+		CCNA_03138	0.84	-1.6
3,287,870	+		CCNA_03138	0.84	-1.4
3,287,870	+		CCNA_03138	0.84	+0.6
3,287,870	+		CCNA_03138	0.84	-2.3
3,287,870	+		CCNA_03138	0.84	-1.8
3,287,913	+		CCNA_03138	0.86	-1.5
3,287,921	-		CCNA_03138	0.87	-2.1
3,287,927	+		CCNA_03138	0.87	-2.0
3,287,948	+		CCNA_03138	0.88	-1.1
3,287,948	+		CCNA_03138	0.88	+1.5
3,288,111	-				-1.3
3,288,119	+				+0.6
3,288,119	+				-0.1
3,288,119	+				+0.2
3,288,119	+				-1.3
3,288,119	+				+1.5
3,288,119	+				+1.1
3,288,119	+				-0.4
3,288,119	-				-0.9
3,288,126	-				-1.0
3,288,127	-				-0.7
3,288,127	-				-0.2
3,288,127	-				-1.3
3,288,127	-				+0.7
3,288,127	-				-0.6
3,288,127	-				-1.7
3,288,127	-				+0.6
3,288,140	+				-1.1
3,288,170	+				-0.8
3,288,178	-				-0.5
3,288,235	-				+0.5
3,288,235	-				-1.0
3,288,308	-				+1.4
3,288,379	-				-0.0
3,288,392	-				+0.8
3,288,445	+				+1.1
3,288,455	+				-3.1
3,288,463	-				+1.2
3,288,467	+				-0.3
3,288,523	+				-1.4
3,288,546	+				-4.7
3,288,546	+				-2.4
3,288,554	-				-2.5
3,288,558	+				-0.8
3,288,561	-				-3.3
3,288,571	+				+0.4
3,288,571	-				-3.5
3,288,590	+				-1.1
3,288,590	+				-1.2
3,288,590	+				-1.6
3,288,590	+				-4.0
3,288,598	-				-3.3
3,288,598	-				-1.9
3,288,645	+				+0.2
3,288,653	-				-3.9
3,288,653	-				-2.8
3,288,659	-		CCNA_03139	0.10	-1.9
3,288,681	+		CCNA_03139	0.11	-0.8
3,288,699	+		CCNA_03139	0.12	-2.8
3,288,703	-		CCNA_03139	0.13	-1.8
3,288,703	-		CCNA_03139	0.13	-2.0
3,288,707	-		CCNA_03139	0.13	-2.2
3,288,793	-		CCNA_03139	0.17	-1.2
3,288,832	+		CCNA_03139	0.20	-1.8
3,288,900	-		CCNA_03139	0.23	-2.0
3,288,900	-				+0.2
3,288,908	+		CCNA_03139	0.24	-3.2
3,288,916	-		CCNA_03139	0.24	-2.6
3,288,916	-		CCNA_03139	0.24	-3.5
3,288,916	-		CCNA_03139	0.24	-1.3
3,288,916	-		CCNA_03139	0.24	-2.3
3,288,916	-		CCNA_03139	0.24	-1.4
3,288,916	-		CCNA_03139	0.24	-2.4
3,288,916	-		CCNA_03139	0.24	-3.2
3,288,916	-		CCNA_03139	0.24	-2.5
3,288,916	-		CCNA_03139	0.24	-4.6
3,288,916	-		CCNA_03139	0.24	-1.2
3,288,916	-		CCNA_03139	0.24	-0.3
3,288,982	+		CCNA_03139	0.28	-0.3
3,289,024	+		CCNA_03139	0.30	-1.7
3,289,027	-				+2.9
3,289,031	+		CCNA_03139	0.30	-1.7
3,289,032	-		CCNA_03139	0.30	-1.5
3,289,032	-		CCNA_03139	0.30	-3.8
3,289,045	+		CCNA_03139	0.31	-1.2
3,289,053	-		CCNA_03139	0.31	-2.7
3,289,127	-		CCNA_03139	0.35	-2.5
3,289,127	-		CCNA_03139	0.35	+0.2
3,289,128	-		CCNA_03139	0.36	+0.5
3,289,184	+		CCNA_03139	0.39	-1.8
3,289,184	+		CCNA_03139	0.39	-1.5
3,289,184	+		CCNA_03139	0.39	-3.5
3,289,192	-		CCNA_03139	0.39	-2.1
3,289,195	+		CCNA_03139	0.39	-1.4