Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19290

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
4,788,706	+				-1.7
4,788,713	-				-0.5
4,788,754	+		CA265_RS19285	0.11	-2.2
4,788,755	-		CA265_RS19285	0.11	-2.4
4,788,784	-		CA265_RS19285	0.14	-1.5
4,788,808	+		CA265_RS19285	0.16	-2.2
4,788,852	+		CA265_RS19285	0.20	-0.5
4,788,869	-		CA265_RS19285	0.22	-1.9
4,788,980	+		CA265_RS19285	0.32	-1.5
4,788,981	-		CA265_RS19285	0.33	-1.7
4,789,027	+		CA265_RS19285	0.37	-2.2
4,789,027	+		CA265_RS19285	0.37	-1.0
4,789,060	+		CA265_RS19285	0.40	+0.2
4,789,063	+		CA265_RS19285	0.40	-1.6
4,789,063	+		CA265_RS19285	0.40	-1.3
4,789,067	+		CA265_RS19285	0.41	-2.1
4,789,136	+		CA265_RS19285	0.47	-2.2
4,789,137	-		CA265_RS19285	0.48	-2.2
4,789,194	+		CA265_RS19285	0.53	+0.8
4,789,208	-		CA265_RS19285	0.54	-1.8
4,789,234	+		CA265_RS19285	0.57	-1.3
4,789,238	+		CA265_RS19285	0.57	-0.7
4,789,328	-		CA265_RS19285	0.66	-1.6
4,789,350	-		CA265_RS19285	0.68	+0.3
4,789,373	-		CA265_RS19285	0.70	-1.2
4,789,398	-		CA265_RS19285	0.73	-1.6
4,789,412	-		CA265_RS19285	0.74	-0.5
4,789,419	-		CA265_RS19285	0.75	-0.2
4,789,426	+		CA265_RS19285	0.75	+0.3
4,789,473	-		CA265_RS19285	0.80	+0.7
4,789,577	+		CA265_RS19285	0.90	+0.3
4,789,587	-				-2.0
4,789,587	-				+0.3
4,789,692	-				+0.3
4,789,760	+		CA265_RS19290	0.13	-1.0
4,789,760	+		CA265_RS19290	0.13	+0.0
4,789,824	+		CA265_RS19290	0.24	-2.4
4,789,825	-		CA265_RS19290	0.24	+0.8
4,789,831	-		CA265_RS19290	0.25	-2.1
4,789,877	+		CA265_RS19290	0.33	-1.7
4,789,913	+		CA265_RS19290	0.39	-2.2
4,789,914	-		CA265_RS19290	0.39	-0.2
4,789,976	+		CA265_RS19290	0.50	-1.7
4,789,997	+		CA265_RS19290	0.54	-1.0
4,790,009	+		CA265_RS19290	0.56	-1.7
4,790,136	+		CA265_RS19290	0.78	-2.2
4,790,139	-		CA265_RS19290	0.78	-3.0
4,790,333	+				-1.6
4,790,418	+		CA265_RS19295	0.14	-1.5
4,790,418	+		CA265_RS19295	0.14	-3.3
4,790,516	+		CA265_RS19295	0.23	-0.6
4,790,538	-		CA265_RS19295	0.25	-1.3
4,790,561	+		CA265_RS19295	0.27	-1.3
4,790,630	-		CA265_RS19295	0.33	-0.2
4,790,683	-		CA265_RS19295	0.38	-1.7
4,790,697	-		CA265_RS19295	0.39	-1.0
4,790,849	+		CA265_RS19295	0.52	+0.3
4,790,850	-		CA265_RS19295	0.53	-1.5
4,790,937	-		CA265_RS19295	0.60	-2.0
4,790,939	+		CA265_RS19295	0.61	-2.8
4,790,992	-		CA265_RS19295	0.65	-0.3
4,791,054	+		CA265_RS19295	0.71	-1.6
4,791,074	+		CA265_RS19295	0.73	+0.3
4,791,075	-		CA265_RS19295	0.73	-1.0
4,791,132	-		CA265_RS19295	0.78	-3.5
4,791,134	-		CA265_RS19295	0.78	-0.9
4,791,135	+		CA265_RS19295	0.78	+0.8
4,791,138	-		CA265_RS19295	0.78	-1.5
4,791,188	+		CA265_RS19295	0.83	-1.6
4,791,189	-		CA265_RS19295	0.83	+0.5
4,791,192	+		CA265_RS19295	0.83	-1.1
4,791,245	+		CA265_RS19295	0.88	+0.3
4,791,245	+		CA265_RS19295	0.88	-1.4