Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19225

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
4,776,928	-		CA265_RS19215	0.89	-1.3
4,776,928	-		CA265_RS19215	0.89	-3.4
4,776,974	-				-1.3
4,776,974	-				-0.2
4,776,978	-				-2.8
4,777,021	-				-2.3
4,777,157	+				-1.3
4,777,214	-		CA265_RS19220	0.16	-0.7
4,777,332	+		CA265_RS19220	0.32	-0.9
4,777,387	+		CA265_RS19220	0.39	-1.9
4,777,415	+		CA265_RS19220	0.43	+0.1
4,777,453	+		CA265_RS19220	0.48	-0.4
4,777,597	+		CA265_RS19220	0.67	-1.6
4,777,609	-		CA265_RS19220	0.69	-1.5
4,777,710	+		CA265_RS19220	0.82	-0.3
4,777,711	-		CA265_RS19220	0.82	-2.7
4,777,739	+		CA265_RS19220	0.86	-1.5
4,777,740	-		CA265_RS19220	0.86	-0.8
4,777,846	-				-0.7
4,777,859	+				-1.6
4,777,874	+				-2.7
4,777,914	+				-2.2
4,777,948	-				-0.5
4,777,951	+				-2.2
4,777,996	-		CA265_RS19225	0.14	-1.2
4,778,005	-		CA265_RS19225	0.15	+0.8
4,778,069	+		CA265_RS19225	0.21	-1.3
4,778,180	+		CA265_RS19225	0.32	-0.4
4,778,180	+		CA265_RS19225	0.32	-2.5
4,778,181	-		CA265_RS19225	0.32	-1.3
4,778,183	+		CA265_RS19225	0.32	-3.1
4,778,184	-		CA265_RS19225	0.32	-1.2
4,778,184	-		CA265_RS19225	0.32	-2.6
4,778,228	+		CA265_RS19225	0.37	+0.8
4,778,239	+		CA265_RS19225	0.38	-0.7
4,778,256	-		CA265_RS19225	0.40	-3.1
4,778,312	-		CA265_RS19225	0.45	-2.2
4,778,374	+		CA265_RS19225	0.51	-1.0
4,778,377	+		CA265_RS19225	0.52	-1.9
4,778,397	+		CA265_RS19225	0.54	-1.2
4,778,444	+		CA265_RS19225	0.58	-1.6
4,778,452	-		CA265_RS19225	0.59	+1.4
4,778,510	+		CA265_RS19225	0.65	-2.0
4,778,539	-		CA265_RS19225	0.68	-1.9
4,778,561	-		CA265_RS19225	0.70	-1.3
4,778,601	-		CA265_RS19225	0.74	-1.2
4,778,707	-		CA265_RS19225	0.84	+3.2
4,778,731	-		CA265_RS19225	0.87	-0.2
4,778,734	+		CA265_RS19225	0.87	-1.2
4,778,821	-				-3.6
4,778,915	+				-1.2
4,778,915	+				-3.5
4,779,012	-		CA265_RS19230	0.14	-0.3
4,779,012	-		CA265_RS19230	0.14	-1.9
4,779,048	+		CA265_RS19230	0.17	-1.5
4,779,051	+		CA265_RS19230	0.17	-2.1
4,779,051	+		CA265_RS19230	0.17	-1.4
4,779,057	-		CA265_RS19230	0.18	-1.9
4,779,111	+		CA265_RS19230	0.23	-2.3
4,779,201	+		CA265_RS19230	0.31	+0.7
4,779,273	-		CA265_RS19230	0.37	-2.0
4,779,353	+		CA265_RS19230	0.44	-1.7
4,779,395	-		CA265_RS19230	0.48	-1.5
4,779,399	+		CA265_RS19230	0.49	-0.2
4,779,399	+		CA265_RS19230	0.49	-0.7
4,779,443	-		CA265_RS19230	0.52	-1.2
4,779,470	+		CA265_RS19230	0.55	-1.4
4,779,471	-		CA265_RS19230	0.55	-0.7
4,779,474	+		CA265_RS19230	0.55	-0.7
4,779,530	+		CA265_RS19230	0.60	-1.3
4,779,569	+		CA265_RS19230	0.64	-1.8
4,779,727	+		CA265_RS19230	0.78	+0.3
4,779,743	+		CA265_RS19230	0.79	-1.0
4,779,758	-		CA265_RS19230	0.81	-1.6
4,779,771	+		CA265_RS19230	0.82	-0.2
4,779,773	+		CA265_RS19230	0.82	-0.2
4,779,773	+		CA265_RS19230	0.82	-2.2
4,779,773	+		CA265_RS19230	0.82	-1.9
4,779,805	-		CA265_RS19230	0.85	-2.4
4,779,852	+		CA265_RS19230	0.89	-1.8
4,779,853	-		CA265_RS19230	0.89	-3.2
4,779,861	+				-3.4