Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04815

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
1,145,261	+		CA265_RS04805	0.65	-0.7
1,145,334	+		CA265_RS04805	0.74	+0.5
1,145,342	+		CA265_RS04805	0.75	-0.3
1,145,438	+		CA265_RS04805	0.86	+0.1
1,145,484	+				-0.8
1,145,530	-				+0.7
1,145,552	-				-0.1
1,145,579	-				+0.1
1,145,640	+		CA265_RS04810	0.23	-1.6
1,145,698	+		CA265_RS04810	0.39	-1.3
1,145,698	+		CA265_RS04810	0.39	+0.1
1,145,698	+		CA265_RS04810	0.39	+0.5
1,145,698	+		CA265_RS04810	0.39	+0.7
1,145,728	-		CA265_RS04810	0.47	-0.3
1,145,756	-		CA265_RS04810	0.55	+0.5
1,145,756	-		CA265_RS04810	0.55	+0.4
1,145,756	-		CA265_RS04810	0.55	-0.1
1,145,776	+		CA265_RS04810	0.60	+0.5
1,145,869	+		CA265_RS04810	0.86	-0.8
1,146,003	-				+0.4
1,146,062	+				-0.8
1,146,087	-				-2.4
1,146,120	-				+0.1
1,146,149	-				-0.1
1,146,157	+				-0.3
1,146,158	-				-0.3
1,146,177	+				-0.5
1,146,177	+				-0.4
1,146,248	+				+0.4
1,146,408	+		CA265_RS04815	0.67	-0.6
1,146,409	-		CA265_RS04815	0.67	+0.3
1,146,428	+		CA265_RS04815	0.75	-0.5
1,146,461	+		CA265_RS04815	0.87	-1.9
1,146,462	-		CA265_RS04815	0.88	-0.8
1,146,522	+				-0.1
1,146,523	-				+0.0
1,146,566	+				-0.8
1,146,666	+				-0.1
1,146,667	-				-0.6
1,146,671	-				-0.7
1,146,671	-				-0.2
1,146,754	-				-1.0
1,146,754	-				-1.4
1,146,757	+				+0.2
1,146,758	-				+0.0
1,146,789	-				-1.4
1,146,794	+				-0.6
1,146,797	+				-0.1
1,146,798	-				-0.2
1,146,829	-				-1.1
1,146,843	+				+0.3
1,146,844	-				-0.0
1,146,859	-				+0.5
1,146,882	-				-0.5
1,147,000	-		CA265_RS04820	0.15	-0.8
1,147,073	-		CA265_RS04820	0.25	-0.1
1,147,075	+		CA265_RS04820	0.26	-0.5
1,147,117	-		CA265_RS04820	0.31	-1.5
1,147,117	-		CA265_RS04820	0.31	-0.7
1,147,317	+		CA265_RS04820	0.60	-1.0
1,147,400	-		CA265_RS04820	0.72	+1.3
1,147,438	+		CA265_RS04820	0.77	-0.5
1,147,438	+		CA265_RS04820	0.77	-0.8
1,147,439	-		CA265_RS04820	0.77	+0.5
1,147,450	+		CA265_RS04820	0.79	+1.1
1,147,491	+		CA265_RS04820	0.85	-0.3