Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10560

Experiment: Fumarate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumarate (C)
2,315,699	+				+0.4
2,315,762	-				+0.6
2,315,762	-				-0.2
2,315,768	-				-0.4
2,315,768	-				+0.9
2,315,768	-				+1.0
2,315,776	+				-0.4
2,315,776	+				-1.0
2,315,776	+				+0.0
2,315,777	-				-0.9
2,315,790	-				+0.2
2,315,790	-				-0.1
2,315,790	-				+0.0
2,315,790	-				+0.3
2,315,800	+				+0.4
2,315,800	+				+0.5
2,315,800	+				+0.6
2,315,801	-				-0.8
2,315,801	-				-0.6
2,315,801	-				+0.7
2,315,801	-				+0.7
2,315,801	-				+0.2
2,315,802	+				+0.4
2,315,802	+				-0.8
2,315,802	+				-0.2
2,315,803	-				+0.3
2,315,803	-				+0.2
2,315,803	-				+0.5
2,315,814	+				-2.7
2,315,814	+				-0.2
2,315,814	+				+0.4
2,315,815	-				-3.1
2,315,815	-				-1.9
2,315,885	+				-0.7
2,315,885	+				-0.2
2,315,885	+				-2.8
2,315,885	+				-0.0
2,315,886	-				-0.0
2,315,911	+				+0.9
2,315,956	-				+0.7
2,315,956	-				+0.5
2,315,963	+				+0.6
2,315,963	+				+0.4
2,315,963	+				-0.5
2,315,963	+				-0.6
2,315,963	+				+0.9
2,315,963	+				-0.8
2,315,963	+				-0.5
2,315,963	+				+0.2
2,315,964	-				-1.1
2,315,964	-				-0.2
2,315,964	-				+0.6
2,315,964	-				-1.0
2,315,964	-				+0.6
2,315,965	+				-0.3
2,315,966	-				+0.3
2,315,966	-				-1.2
2,315,966	-				+0.4
2,315,969	+				+0.2
2,315,969	+				+1.4
2,315,969	+				+0.4
2,315,969	+				-0.7
2,315,969	+				-0.3
2,315,969	+				+0.2
2,315,969	+				+0.4
2,315,969	+				-0.9
2,315,969	+				-1.5
2,315,969	+				+1.1
2,315,969	+				-0.3
2,315,969	+				+0.7
2,315,969	+				-0.6
2,315,969	+				+1.0
2,315,969	+				+1.0
2,315,969	+				-0.5
2,315,970	-				+0.7
2,315,970	-				+0.7
2,315,970	-				+1.8
2,315,970	-				+0.5
2,315,970	-				+0.3
2,315,970	-				-0.9
2,315,970	-				-0.3
2,315,970	-				-1.0
2,315,970	-				+0.3
2,315,970	-				+0.7
2,315,970	-				-0.5
2,315,970	-				+0.0
2,315,970	-				+0.7
2,315,970	-				-0.9
2,315,970	-				+1.7
2,315,970	-				-0.1
2,315,970	-				-0.9
2,315,970	-				+1.0
2,316,003	+				+0.9
2,316,003	+				-0.9
2,316,003	+				-0.6
2,316,003	+				+0.1
2,316,003	+				-0.3
2,316,003	+				-0.1
2,316,004	-				-0.1
2,316,004	-				-1.0
2,316,004	-				-1.1
2,316,004	-				-0.6
2,316,004	-				-0.0
2,316,004	-				+0.3
2,316,047	+		AO353_10555	0.14	+0.9
2,316,047	+		AO353_10555	0.14	-1.2
2,316,047	+		AO353_10555	0.14	+0.9
2,316,047	+		AO353_10555	0.14	+0.1
2,316,047	+		AO353_10555	0.14	+0.8
2,316,047	+		AO353_10555	0.14	+1.1
2,316,047	+		AO353_10555	0.14	-0.1
2,316,047	+		AO353_10555	0.14	-1.7
2,316,047	+		AO353_10555	0.14	-0.5
2,316,047	+		AO353_10555	0.14	+1.1
2,316,047	+		AO353_10555	0.14	+0.2
2,316,047	+		AO353_10555	0.14	+0.2
2,316,047	+		AO353_10555	0.14	+0.7
2,316,047	+		AO353_10555	0.14	-1.0
2,316,047	+		AO353_10555	0.14	-0.5
2,316,047	+		AO353_10555	0.14	-0.6
2,316,047	+		AO353_10555	0.14	+0.2
2,316,047	+		AO353_10555	0.14	-0.6
2,316,047	+		AO353_10555	0.14	+0.7
2,316,047	+		AO353_10555	0.14	-0.5
2,316,048	-		AO353_10555	0.14	-0.2
2,316,048	-		AO353_10555	0.14	-0.4
2,316,048	-		AO353_10555	0.14	+1.9
2,316,048	-		AO353_10555	0.14	+0.1
2,316,048	-		AO353_10555	0.14	-1.2
2,316,048	-		AO353_10555	0.14	+0.7
2,316,048	-		AO353_10555	0.14	-0.5
2,316,048	-		AO353_10555	0.14	+0.2
2,316,048	-		AO353_10555	0.14	+1.5
2,316,048	-		AO353_10555	0.14	+0.7
2,316,048	-		AO353_10555	0.14	-0.4
2,316,048	-		AO353_10555	0.14	+0.9
2,316,048	-		AO353_10555	0.14	-0.3
2,316,048	-		AO353_10555	0.14	+0.0
2,316,048	-		AO353_10555	0.14	-2.3
2,316,048	-		AO353_10555	0.14	-0.6
2,316,048	-		AO353_10555	0.14	-1.4
2,316,048	-		AO353_10555	0.14	-0.6
2,316,048	-		AO353_10555	0.14	-0.3
2,316,048	-		AO353_10555	0.14	-1.2
2,316,048	-		AO353_10555	0.14	+0.2
2,316,048	-		AO353_10555	0.14	+0.4
2,316,048	-		AO353_10555	0.14	-0.2
2,316,048	-		AO353_10555	0.14	+0.9
2,316,048	-		AO353_10555	0.14	-0.3
2,316,048	-		AO353_10555	0.14	-0.4
2,316,048	-		AO353_10555	0.14	+0.4
2,316,060	+		AO353_10555	0.17	-0.1
2,316,060	+		AO353_10555	0.17	+0.4
2,316,061	-		AO353_10555	0.18	-0.3
2,316,061	-		AO353_10555	0.18	-0.2
2,316,061	-		AO353_10555	0.18	-1.9
2,316,100	+		AO353_10555	0.28	-0.2
2,316,101	-		AO353_10555	0.28	+0.6
2,316,101	-		AO353_10555	0.28	-2.9
2,316,157	+		AO353_10555	0.44	-0.2
2,316,157	+		AO353_10555	0.44	+0.9
2,316,157	+		AO353_10555	0.44	+0.4
2,316,158	-		AO353_10555	0.44	-0.0
2,316,158	-		AO353_10555	0.44	+0.3
2,316,251	+		AO353_10555	0.69	-0.9
2,316,252	-		AO353_10555	0.69	+0.3
2,316,258	+		AO353_10555	0.71	+0.3
2,316,258	+		AO353_10555	0.71	+0.1
2,316,258	+		AO353_10555	0.71	+0.1
2,316,258	+		AO353_10555	0.71	-1.9
2,316,258	+		AO353_10555	0.71	-0.5
2,316,258	+		AO353_10555	0.71	-0.1
2,316,258	+		AO353_10555	0.71	-1.7
2,316,258	+		AO353_10555	0.71	-1.2
2,316,259	-		AO353_10555	0.71	-0.4
2,316,259	-		AO353_10555	0.71	+0.1
2,316,259	-		AO353_10555	0.71	-0.5
2,316,259	-		AO353_10555	0.71	+0.2
2,316,259	-		AO353_10555	0.71	-0.7
2,316,259	-		AO353_10555	0.71	-0.5
2,316,259	-		AO353_10555	0.71	-0.4
2,316,259	-		AO353_10555	0.71	+0.1
2,316,259	-		AO353_10555	0.71	-0.6
2,316,259	-		AO353_10555	0.71	+1.1
2,316,284	+		AO353_10555	0.78	-0.6
2,316,284	+		AO353_10555	0.78	-0.0
2,316,362	+				-0.3
2,316,362	+				-0.2
2,316,375	+				+0.3
2,316,375	+				+1.0
2,316,376	-				-0.0
2,316,376	-				+1.0
2,316,376	-				-0.7
2,316,376	-				+0.5
2,316,396	-				-0.4
2,316,420	+				-1.0
2,316,420	+				-1.0
2,316,420	+				+0.7
2,316,420	+				-0.8
2,316,420	+				-2.3
2,316,421	-				+1.1
2,316,421	-				-0.2
2,316,421	-				+1.0
2,316,421	-				+0.1
2,316,421	-				+0.2
2,316,421	-				-0.1
2,316,421	-				-0.7
2,316,421	-				+0.2
2,316,421	-				+0.9
2,316,421	-				-0.0
2,316,421	-				-0.2
2,316,421	-				+0.8
2,316,447	+				+0.7
2,316,447	+				+0.0
2,316,447	+				-0.6
2,316,448	-				+0.6
2,316,448	-				-1.2
2,316,448	-				+0.8
2,316,448	-				-0.9
2,316,448	-				+1.8
2,316,466	+				-1.9
2,316,466	+				+0.1
2,316,483	+		AO353_10560	0.12	-0.9
2,316,495	+		AO353_10560	0.15	-0.6
2,316,496	-		AO353_10560	0.15	+0.3
2,316,498	+		AO353_10560	0.16	-0.8
2,316,498	+		AO353_10560	0.16	-1.1
2,316,498	+		AO353_10560	0.16	-0.2
2,316,499	-		AO353_10560	0.16	-0.7
2,316,499	-		AO353_10560	0.16	-1.5
2,316,741	+		AO353_10560	0.83	-0.5
2,316,741	+		AO353_10560	0.83	+0.5
2,316,741	+		AO353_10560	0.83	-0.2
2,316,741	+		AO353_10560	0.83	-1.1
2,316,741	+		AO353_10560	0.83	-0.6
2,316,777	+				+0.2
2,316,777	+				+0.1
2,316,777	+				+0.5
2,316,777	+				-0.1
2,316,777	+				+0.5
2,316,777	+				-0.4
2,316,778	-				+0.2
2,316,778	-				-2.1
2,316,778	-				+0.9
2,316,778	-				-1.5
2,316,778	-				-0.9
2,316,800	+				-0.5
2,316,800	+				-1.1
2,316,800	+				+0.1
2,316,800	+				+0.8
2,316,801	-				-0.2
2,316,801	-				+0.4
2,316,807	+				+0.4
2,316,807	+				-0.4
2,316,807	+				-0.6
2,316,851	-				+0.0
2,316,851	-				+1.1
2,316,851	-				-0.1
2,316,851	-				+0.7
2,316,851	-				-0.6
2,316,855	-				-0.5
2,316,855	-				-1.0
2,316,855	-				-0.1
2,316,855	-				-0.2
2,316,855	-				+0.0
2,316,894	+				+0.4
2,316,894	+				+0.7
2,316,894	+				+0.6
2,316,895	-				+0.6
2,316,895	-				+0.3
2,316,895	-				-0.3
2,316,903	+				+0.8
2,316,903	+				+0.1
2,316,903	+				-1.6
2,316,903	+				+0.3
2,316,903	+				-0.6
2,316,903	+				-0.2
2,316,903	+				-0.2
2,316,903	+				+1.9
2,316,903	+				-0.2
2,316,903	+				+0.5
2,316,903	+				-1.0
2,316,903	+				-0.4
2,316,903	+				+2.2
2,316,903	+				-0.4
2,316,903	+				-0.6
2,316,903	+				+0.5
2,316,904	-				-0.4
2,316,904	-				+1.2
2,316,904	-				+0.3
2,316,904	-				-0.4
2,316,904	-				-0.3
2,316,904	-				+1.0
2,316,904	-				-1.6
2,316,904	-				+1.5
2,316,904	-				-0.1
2,316,904	-				+0.9
2,316,904	-				-0.3
2,316,904	-				-0.5
2,316,904	-				-0.3
2,316,907	+				+0.5
2,316,907	+				-0.8
2,316,907	+				+0.4
2,316,907	+				-0.1
2,316,907	+				-1.0
2,316,907	+				+0.6
2,316,907	+				-0.0
2,316,907	+				-0.4
2,316,907	+				-0.6
2,316,907	+				-0.0
2,316,907	+				-1.0
2,316,907	+				-0.0
2,316,908	-				+0.6
2,316,908	-				+0.4
2,316,908	-				+0.1
2,316,908	-				+0.9
2,316,908	-				+0.5
2,316,908	-				+0.3
2,316,908	-				+0.3
2,316,908	-				+0.6
2,316,908	-				+0.5
2,316,908	-				+0.4
2,316,978	+				-2.5
2,316,978	+				+0.8
2,316,978	+				+0.3
2,316,978	+				-0.0
2,316,978	+				+0.6
2,316,978	+				-0.9
2,316,979	-				+0.1
2,316,979	-				+0.2
2,316,979	-				+1.2
2,316,979	-				+0.3
2,316,979	-				+0.3
2,316,979	-				-0.9
2,316,984	+				-1.5
2,316,984	+				+0.7
2,316,984	+				+0.7
2,316,984	+				-0.2
2,316,984	+				+0.7
2,316,984	+				+0.4
2,316,984	+				+0.3
2,316,984	+				+0.0
2,316,984	+				+0.7
2,316,984	+				-0.7
2,316,984	+				+0.1
2,316,984	+				-0.2
2,316,984	+				+0.1
2,316,984	+				+0.3
2,316,984	+				-0.1
2,316,984	+				+1.4
2,316,984	+				-0.4
2,316,984	+				-0.4
2,316,984	+				-0.4
2,316,984	+				-0.4
2,316,984	+				+1.0
2,316,984	+				-0.0
2,316,984	+				-0.2
2,316,984	+				+1.5
2,316,984	+				-0.4
2,316,984	+				+0.8
2,316,984	+				-0.6
2,316,984	+				+0.1
2,316,984	+				-0.1
2,316,985	-				+1.1
2,316,985	-				-0.4
2,316,985	-				-0.4
2,316,985	-				-1.4
2,316,985	-				-0.5
2,316,985	-				-0.2
2,316,985	-				+1.0
2,316,985	-				-1.8
2,316,985	-				+0.3
2,316,985	-				-0.5
2,316,985	-				-0.5
2,316,985	-				-0.2
2,316,985	-				+0.6
2,316,985	-				+0.2
2,316,985	-				-0.0
2,316,985	-				+0.5
2,316,985	-				+0.4
2,316,985	-				-0.8
2,316,985	-				+0.3
2,316,985	-				+0.4
2,316,985	-				+1.2
2,316,985	-				-0.2
2,316,985	-				-0.6
2,316,985	-				+1.8
2,316,985	-				+0.2
2,316,985	-				-0.2
2,316,985	-				+1.4
2,316,985	-				+0.6
2,316,985	-				-0.1
2,316,986	+				-1.8
2,316,986	+				-2.0
2,316,986	+				-0.1
2,316,986	+				-0.1
2,316,986	+				-0.8
2,316,986	+				-1.2
2,316,986	+				+1.4
2,316,986	+				-0.7
2,316,986	+				-0.4
2,316,986	+				-1.5
2,316,986	+				+0.3
2,316,987	-				+0.9
2,316,987	-				-0.9
2,316,987	-				-0.2
2,316,987	-				-0.9
2,316,987	-				-0.1
2,316,987	-				+0.3
2,317,019	+				-0.2
2,317,019	+				-1.5
2,317,020	-				-0.4
2,317,077	+				+0.2
2,317,077	+				+0.6
2,317,077	+				-0.2
2,317,077	+				-2.4
2,317,078	-				+0.6
2,317,078	-				+0.0
2,317,078	-				-0.5
2,317,117	-				-1.6
2,317,117	-				+1.3
2,317,147	+				+1.4
2,317,147	+				-0.3
2,317,147	+				-0.3
2,317,147	+				-0.4
2,317,148	-				+0.1
2,317,148	-				+0.1
2,317,207	+		AO353_10565	0.15	-0.4
2,317,207	+		AO353_10565	0.15	-0.1
2,317,208	-		AO353_10565	0.15	+0.2
2,317,208	-		AO353_10565	0.15	+0.2
2,317,208	-		AO353_10565	0.15	+0.5
2,317,217	+		AO353_10565	0.16	-0.0
2,317,267	+		AO353_10565	0.23	-0.0
2,317,267	+		AO353_10565	0.23	+0.6
2,317,268	-		AO353_10565	0.24	-0.8
2,317,268	-		AO353_10565	0.24	+1.9
2,317,268	-		AO353_10565	0.24	+0.9
2,317,273	+		AO353_10565	0.24	+0.6
2,317,273	+		AO353_10565	0.24	+0.9
2,317,273	+		AO353_10565	0.24	+0.4
2,317,274	-		AO353_10565	0.24	-0.0
2,317,274	-		AO353_10565	0.24	+0.7
2,317,274	-		AO353_10565	0.24	-0.2
2,317,274	-		AO353_10565	0.24	-1.0
2,317,274	-		AO353_10565	0.24	-0.8
2,317,274	-		AO353_10565	0.24	-0.1
2,317,327	+		AO353_10565	0.32	-0.2
2,317,507	+		AO353_10565	0.57	-0.9
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2,317,507	+		AO353_10565	0.57	+0.4
2,317,507	+		AO353_10565	0.57	+0.8
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2,317,595	+		AO353_10565	0.69	-0.5
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2,317,596	-		AO353_10565	0.69	-1.7
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2,317,596	-		AO353_10565	0.69	-0.1
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2,317,624	-		AO353_10565	0.73	-0.6
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2,317,692	+		AO353_10565	0.82	-0.1
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2,317,693	-		AO353_10565	0.82	-0.0
2,317,783	-				+0.2
2,317,783	-				-0.6