Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20910

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
5,154,838	+		CA265_RS20900	0.81	-0.9
5,154,859	-		CA265_RS20900	0.85	+0.1
5,154,889	+				-0.4
5,154,923	-				-0.7
5,155,666	+				+0.6
5,155,696	+				-0.2
5,155,745	+				+0.4
5,155,765	-				+0.6
5,155,768	+				+0.1
5,155,768	+				-1.4
5,155,768	+				-0.5
5,155,783	-				+0.0
5,155,787	-				-0.9
5,155,831	+				+0.0
5,155,845	+				-1.1
5,155,846	-				+1.0
5,155,846	-				-0.2
5,155,891	-				+0.7
5,155,911	+				-0.3
5,155,997	+		CA265_RS20910	0.14	+0.2
5,155,997	+		CA265_RS20910	0.14	+0.8
5,156,018	+		CA265_RS20910	0.15	-0.6
5,156,018	+		CA265_RS20910	0.15	-0.3
5,156,019	-		CA265_RS20910	0.15	-1.7
5,156,022	+		CA265_RS20910	0.16	-1.1
5,156,022	+		CA265_RS20910	0.16	+0.6
5,156,029	+		CA265_RS20910	0.16	-0.3
5,156,059	-		CA265_RS20910	0.19	-1.3
5,156,106	-		CA265_RS20910	0.23	-2.6
5,156,247	+		CA265_RS20910	0.35	-0.6
5,156,248	-		CA265_RS20910	0.35	-1.6
5,156,281	-		CA265_RS20910	0.38	-1.8
5,156,281	-		CA265_RS20910	0.38	-0.4
5,156,346	+		CA265_RS20910	0.43	+0.3
5,156,380	+		CA265_RS20910	0.46	-1.6
5,156,381	-		CA265_RS20910	0.46	+1.0
5,156,383	+		CA265_RS20910	0.46	+0.0
5,156,458	+		CA265_RS20910	0.53	-0.6
5,156,458	+		CA265_RS20910	0.53	+0.6
5,156,520	+		CA265_RS20910	0.58	+0.0
5,156,562	+		CA265_RS20910	0.62	-0.1
5,156,583	+		CA265_RS20910	0.63	-0.5
5,156,586	-		CA265_RS20910	0.64	-0.4
5,156,615	-		CA265_RS20910	0.66	-1.1
5,156,626	-		CA265_RS20910	0.67	+0.2
5,156,727	+		CA265_RS20910	0.76	-1.0
5,156,738	-		CA265_RS20910	0.77	-0.0
5,156,762	-		CA265_RS20910	0.79	-1.0
5,156,792	-				+2.2
5,156,825	-		CA265_RS20910	0.84	-3.3
5,156,901	+				+0.2
5,156,902	-				-0.8
5,156,923	+				-1.2
5,157,023	+				-1.5
5,157,065	-				-0.3
5,157,070	-				+1.3
5,157,596	-				+0.4
5,157,664	-				-0.2
5,157,707	-				-0.5
5,157,722	-		CA265_RS20920	0.12	+0.7
5,157,761	+		CA265_RS20920	0.20	-0.0
5,157,764	-		CA265_RS20920	0.21	+0.5
5,157,764	-		CA265_RS20920	0.21	-0.5
5,157,764	-		CA265_RS20920	0.21	+0.2
5,157,805	+		CA265_RS20920	0.29	-0.1
5,157,806	-		CA265_RS20920	0.29	-0.5
5,157,843	+		CA265_RS20920	0.37	-1.2
5,157,886	+		CA265_RS20920	0.46	-0.4
5,157,892	+		CA265_RS20920	0.47	-0.2
5,157,892	+		CA265_RS20920	0.47	-0.2
5,157,893	-		CA265_RS20920	0.47	+0.4
5,157,915	-		CA265_RS20920	0.52	+0.1
5,157,922	+		CA265_RS20920	0.53	-0.2