Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16980

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
4,237,670	+		CA265_RS16975	0.75	-1.5
4,237,704	+		CA265_RS16975	0.76	-0.3
4,237,799	+		CA265_RS16975	0.80	+0.8
4,237,800	-		CA265_RS16975	0.80	-0.8
4,237,800	-		CA265_RS16975	0.80	-0.2
4,237,868	-		CA265_RS16975	0.83	-0.9
4,237,960	-		CA265_RS16975	0.87	+0.9
4,237,986	+		CA265_RS16975	0.88	+0.6
4,237,986	+		CA265_RS16975	0.88	+0.3
4,237,987	-		CA265_RS16975	0.88	+0.5
4,237,991	+		CA265_RS16975	0.88	-0.2
4,237,991	+		CA265_RS16975	0.88	+1.1
4,238,044	-				+0.2
4,238,127	+				+0.4
4,238,179	+				+0.7
4,238,245	-				+0.0
4,238,332	-				-0.5
4,238,505	+				-0.2
4,238,516	-				+0.2
4,238,565	+				+0.8
4,238,569	-				-0.0
4,238,569	-				+0.0
4,238,591	+				+0.3
4,238,646	+				+0.8
4,238,646	+				-0.3
4,238,662	-				+0.4
4,238,702	+		CA265_RS16980	0.12	+1.1
4,238,703	-		CA265_RS16980	0.12	+0.6
4,238,721	+		CA265_RS16980	0.14	-0.5
4,238,722	-		CA265_RS16980	0.14	+0.7
4,238,763	+		CA265_RS16980	0.17	+0.5
4,238,764	-		CA265_RS16980	0.17	+0.5
4,239,025	+		CA265_RS16980	0.36	+0.5
4,239,065	-		CA265_RS16980	0.39	+0.4
4,239,089	-		CA265_RS16980	0.41	-0.5
4,239,183	-		CA265_RS16980	0.48	+0.0
4,239,229	-		CA265_RS16980	0.51	+0.3
4,239,315	-		CA265_RS16980	0.58	+1.5
4,239,346	+		CA265_RS16980	0.60	+0.1
4,239,353	+		CA265_RS16980	0.61	+0.4
4,239,353	+		CA265_RS16980	0.61	+0.6
4,239,354	-		CA265_RS16980	0.61	+0.5
4,239,377	-		CA265_RS16980	0.62	-0.1
4,239,388	-		CA265_RS16980	0.63	+0.4
4,239,412	-		CA265_RS16980	0.65	-0.5
4,239,464	+		CA265_RS16980	0.69	-0.1
4,239,571	-		CA265_RS16980	0.77	+0.4
4,239,586	-		CA265_RS16980	0.78	+0.2
4,239,586	-		CA265_RS16980	0.78	-0.4
4,239,643	+		CA265_RS16980	0.82	+1.2
4,239,644	-		CA265_RS16980	0.82	+0.3
4,239,664	+		CA265_RS16980	0.84	+1.3
4,239,699	+		CA265_RS16980	0.86	-0.2
4,239,704	-		CA265_RS16980	0.87	-0.1
4,239,704	-		CA265_RS16980	0.87	-1.0
4,239,742	-		CA265_RS16980	0.90	-1.5
4,239,989	-				+0.7
4,240,008	-				+0.3
4,240,011	+				-0.7
4,240,012	-				-0.3
4,240,035	+				+0.2
4,240,036	-				+0.4
4,240,036	-				+0.4
4,240,038	-				+0.7
4,240,055	-				-0.6
4,240,068	+		CA265_RS16985	0.13	+1.0
4,240,127	-		CA265_RS16985	0.29	+0.0
4,240,177	+		CA265_RS16985	0.43	-0.4
4,240,210	+		CA265_RS16985	0.52	-0.4
4,240,268	-		CA265_RS16985	0.68	+2.0
4,240,381	-				+0.0
4,240,381	-				+0.4
4,240,450	-		CA265_RS16990	0.28	-0.7
4,240,450	-		CA265_RS16990	0.28	+0.1
4,240,450	-		CA265_RS16990	0.28	-0.6
4,240,454	+		CA265_RS16990	0.30	-0.5
4,240,533	-		CA265_RS16990	0.71	-0.7
4,240,552	+		CA265_RS16990	0.81	+1.1
4,240,594	+				+0.1
4,240,628	-				-0.1
4,240,628	-				+0.5
4,240,629	+				+0.9
4,240,630	-				+0.4
4,240,630	-				+0.2
4,240,635	+				+0.4
4,240,636	-				-1.2
4,240,641	-				+0.6
4,240,669	-				-0.0
4,240,733	+				+0.7
4,240,734	-				-0.7
4,240,759	-				-0.2
4,240,811	+				-0.2
4,240,851	+				-0.2
4,240,853	+				+0.1
4,240,857	+				-0.4