Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14580

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
3,670,402	+		CA265_RS14570	0.42	-1.4
3,670,431	+		CA265_RS14570	0.49	-1.1
3,670,431	+		CA265_RS14570	0.49	-0.9
3,670,431	+		CA265_RS14570	0.49	-0.4
3,670,436	-		CA265_RS14570	0.50	-1.5
3,670,438	+		CA265_RS14570	0.51	-0.4
3,670,506	-		CA265_RS14570	0.67	-1.3
3,670,559	-		CA265_RS14570	0.80	-0.9
3,670,559	-		CA265_RS14570	0.80	-0.3
3,670,629	+				-0.9
3,670,630	-				-0.9
3,670,679	+				-0.0
3,670,725	+				-0.2
3,670,725	+				-0.2
3,670,725	+				+0.7
3,670,726	-				-0.3
3,670,824	-		CA265_RS14575	0.28	-0.4
3,670,830	-		CA265_RS14575	0.29	-0.1
3,670,882	+		CA265_RS14575	0.39	+0.1
3,670,939	+		CA265_RS14575	0.50	+0.3
3,670,939	+		CA265_RS14575	0.50	+2.5
3,670,939	+		CA265_RS14575	0.50	+0.4
3,670,946	-		CA265_RS14575	0.51	+0.2
3,671,019	-		CA265_RS14575	0.65	-1.0
3,671,081	+		CA265_RS14575	0.77	-0.8
3,671,081	+		CA265_RS14575	0.77	+0.7
3,671,090	-		CA265_RS14575	0.78	-0.6
3,671,108	-		CA265_RS14575	0.82	+0.7
3,671,215	-				+0.0
3,671,222	-				+1.0
3,671,225	+				+0.0
3,671,253	-				-0.8
3,671,282	+				+1.1
3,671,358	+				-1.2
3,671,391	+				+0.0
3,671,391	+				-3.1
3,671,426	+		CA265_RS14580	0.14	-0.5
3,671,427	-		CA265_RS14580	0.14	-1.3
3,671,430	+		CA265_RS14580	0.14	-0.5
3,671,448	-		CA265_RS14580	0.17	-0.6
3,671,466	-		CA265_RS14580	0.20	-0.6
3,671,480	-		CA265_RS14580	0.22	-0.6
3,671,480	-		CA265_RS14580	0.22	-1.2
3,671,489	-		CA265_RS14580	0.23	+0.1
3,671,520	+		CA265_RS14580	0.27	-0.2
3,671,521	-		CA265_RS14580	0.28	-0.8
3,671,575	+		CA265_RS14580	0.36	-0.8
3,671,628	+		CA265_RS14580	0.43	-1.6
3,671,629	-		CA265_RS14580	0.43	-0.8
3,671,692	+		CA265_RS14580	0.53	-1.1
3,671,727	+		CA265_RS14580	0.58	-0.3
3,671,991	+				+0.1
3,672,034	+				-0.4
3,672,035	-				-0.0
3,672,042	+				-0.3
3,672,060	+				-0.6
3,672,091	-				+0.0
3,672,093	+				-0.2
3,672,178	+				+0.9
3,672,194	-				+0.1
3,672,213	-				-1.3
3,672,222	+				+0.8
3,672,226	-				-0.0
3,672,239	-				+0.2
3,672,333	-		CA265_RS14585	0.17	-0.5
3,672,376	-		CA265_RS14585	0.22	-0.3
3,672,376	-		CA265_RS14585	0.22	-0.5
3,672,427	+		CA265_RS14585	0.28	+0.8
3,672,473	+		CA265_RS14585	0.34	+0.5
3,672,541	-		CA265_RS14585	0.42	-0.2
3,672,541	-		CA265_RS14585	0.42	+0.8
3,672,541	-		CA265_RS14585	0.42	-0.1
3,672,541	-		CA265_RS14585	0.42	-0.6
3,672,643	+		CA265_RS14585	0.54	-0.9
3,672,667	-		CA265_RS14585	0.57	+0.6
3,672,725	+		CA265_RS14585	0.64	+0.1
3,672,766	-		CA265_RS14585	0.69	+0.4
3,672,790	+		CA265_RS14585	0.72	+0.4
3,672,791	-		CA265_RS14585	0.72	+0.1
3,672,793	-		CA265_RS14585	0.72	-0.6
3,672,842	-		CA265_RS14585	0.78	-0.8
3,672,842	-		CA265_RS14585	0.78	-0.5
3,672,869	-		CA265_RS14585	0.81	+0.4
3,672,889	-		CA265_RS14585	0.84	-0.3
3,672,930	+		CA265_RS14585	0.89	+0.4
3,672,969	-				+0.5
3,672,999	+				-0.6
3,673,000	-				+0.0