Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08860

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
2,213,984	+		CA265_RS08855	0.45	+0.1
2,213,984	+		CA265_RS08855	0.45	+0.6
2,214,066	+		CA265_RS08855	0.51	+0.1
2,214,072	+		CA265_RS08855	0.51	+0.8
2,214,147	+		CA265_RS08855	0.57	-0.4
2,214,148	-		CA265_RS08855	0.57	-0.5
2,214,224	-		CA265_RS08855	0.62	+0.5
2,214,225	+		CA265_RS08855	0.62	+0.1
2,214,226	-		CA265_RS08855	0.62	+0.5
2,214,226	-		CA265_RS08855	0.62	+0.9
2,214,238	-		CA265_RS08855	0.63	+0.1
2,214,281	+		CA265_RS08855	0.66	-0.5
2,214,282	-		CA265_RS08855	0.66	-0.9
2,214,300	-		CA265_RS08855	0.68	-0.2
2,214,317	+		CA265_RS08855	0.69	+0.5
2,214,395	-		CA265_RS08855	0.74	+0.9
2,214,412	-		CA265_RS08855	0.76	+1.2
2,214,412	-		CA265_RS08855	0.76	+0.4
2,214,430	+		CA265_RS08855	0.77	-1.1
2,214,450	+		CA265_RS08855	0.78	-0.2
2,214,493	+				-0.5
2,214,570	-		CA265_RS08855	0.87	-0.2
2,214,612	-				+0.6
2,214,677	+				-0.2
2,214,682	-				-0.5
2,214,722	+				+0.8
2,214,722	+				-0.4
2,214,723	-				+0.3
2,214,750	-				-0.1
2,214,777	-				-0.3
2,214,795	+				+0.2
2,214,801	-				+0.3
2,214,866	+				-0.2
2,214,869	-				-0.2
2,214,921	-				-0.8
2,215,003	-		CA265_RS08860	0.11	-0.5
2,215,003	-		CA265_RS08860	0.11	-0.4
2,215,033	+		CA265_RS08860	0.16	-2.1
2,215,039	+		CA265_RS08860	0.17	-0.1
2,215,040	-		CA265_RS08860	0.17	-0.0
2,215,050	-		CA265_RS08860	0.19	-1.0
2,215,081	-		CA265_RS08860	0.24	-1.5
2,215,104	+		CA265_RS08860	0.28	-0.7
2,215,104	+		CA265_RS08860	0.28	-1.0
2,215,179	-		CA265_RS08860	0.40	+0.3
2,215,184	+		CA265_RS08860	0.41	-3.4
2,215,305	+		CA265_RS08860	0.60	-0.3
2,215,306	-		CA265_RS08860	0.60	-0.6
2,215,307	+		CA265_RS08860	0.61	-0.7
2,215,307	+		CA265_RS08860	0.61	+0.0
2,215,307	+		CA265_RS08860	0.61	-1.1
2,215,307	+		CA265_RS08860	0.61	-0.6
2,215,307	+		CA265_RS08860	0.61	+0.5
2,215,309	+		CA265_RS08860	0.61	-0.9
2,215,314	+		CA265_RS08860	0.62	-0.7
2,215,383	+		CA265_RS08860	0.73	-1.5
2,215,384	-		CA265_RS08860	0.73	-1.4
2,215,384	-		CA265_RS08860	0.73	-1.4
2,215,526	+				-2.1
2,215,528	-				-1.5
2,215,548	+				-0.1
2,215,629	-				-0.5
2,215,639	-				+0.2