Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07625

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
1,909,144	+		CA265_RS07610	0.86	-0.0
1,909,171	+				-0.1
1,909,182	+				-0.2
1,909,183	-				-0.1
1,909,185	-				+0.1
1,909,185	-				+1.1
1,909,302	+		CA265_RS07615	0.23	-0.2
1,909,302	+		CA265_RS07615	0.23	-0.7
1,909,303	-		CA265_RS07615	0.23	-0.5
1,909,341	+		CA265_RS07615	0.33	-0.1
1,909,342	-		CA265_RS07615	0.33	+0.5
1,909,434	+		CA265_RS07615	0.57	+0.0
1,909,544	-		CA265_RS07615	0.86	-0.3
1,909,577	+				-0.5
1,909,581	-				+0.8
1,909,584	+				+0.7
1,909,672	-				-0.3
1,909,681	-				+0.8
1,909,691	+				+0.2
1,909,724	+		CA265_RS07620	0.10	-0.0
1,909,725	-		CA265_RS07620	0.11	+0.1
1,909,730	+		CA265_RS07620	0.13	-0.4
1,909,756	-		CA265_RS07620	0.27	+0.0
1,909,824	+		CA265_RS07620	0.63	-0.0
1,909,839	-		CA265_RS07620	0.71	-0.3
1,909,877	-				-0.1
1,909,892	-				+0.3
1,909,892	-				+0.9
1,909,913	-				-0.3
1,909,917	+				-0.4
1,909,917	+				-2.2
1,910,026	-				-0.6
1,910,055	+		CA265_RS07625	0.16	-1.1
1,910,069	+		CA265_RS07625	0.23	-0.7
1,910,070	-		CA265_RS07625	0.24	-0.8
1,910,090	-		CA265_RS07625	0.34	-0.2
1,910,197	-				+0.3
1,910,296	+				-0.5
1,910,308	-				+0.4
1,910,308	-				-0.2
1,910,329	-				+0.8
1,910,337	-				-0.5
1,910,341	+				+0.3
1,910,401	-		CA265_RS07630	0.13	+0.1
1,910,402	+		CA265_RS07630	0.13	-0.6
1,910,403	-		CA265_RS07630	0.13	+0.4
1,910,406	+		CA265_RS07630	0.14	-1.7
1,910,407	-		CA265_RS07630	0.14	-0.6
1,910,520	+		CA265_RS07630	0.28	-0.2
1,910,521	-		CA265_RS07630	0.28	+0.3
1,910,584	-		CA265_RS07630	0.36	-0.3
1,910,602	-		CA265_RS07630	0.39	-0.0
1,910,602	-		CA265_RS07630	0.39	+0.3
1,910,611	-		CA265_RS07630	0.40	-0.1
1,910,644	+		CA265_RS07630	0.44	-0.2
1,910,662	-		CA265_RS07630	0.46	-0.3
1,910,722	+		CA265_RS07630	0.54	+0.1
1,910,729	-		CA265_RS07630	0.55	-1.5
1,910,780	+		CA265_RS07630	0.61	-0.7
1,910,821	+		CA265_RS07630	0.66	+2.5
1,910,853	+		CA265_RS07630	0.70	+0.4
1,910,854	-		CA265_RS07630	0.70	+0.5
1,910,904	+		CA265_RS07630	0.77	+0.2
1,910,905	-		CA265_RS07630	0.77	+0.8
1,910,905	-		CA265_RS07630	0.77	+0.5
1,911,008	-		CA265_RS07630	0.90	-1.1
1,911,045	+				-0.6
1,911,083	-				+0.7
1,911,134	+		CA265_RS07635	0.18	+0.9